RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 COLEC12Q5KU26 742 aa3.52□□□□□ -1.85
HMGB1P35-201ENST00000503360 USP53Q70EK8 1073 aa3.52□□□□□ -1.85
HMGB1P35-201ENST00000503360 KCTD1Q719H9 257 aa3.52□□□□□ -1.85
HMGB1P35-201ENST00000503360 KIAA0907Q7Z7F0 614 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P35-201ENST00000503360 SYNPOQ8N3V7 929 aa3.52□□□□□ -1.85
HMGB1P35-201ENST00000503360 FEZ1Q99689 392 aa3.52□□□□□ -1.85
HMGB1P35-201ENST00000503360 OR10A2Q9H208 303 aa3.52□□□□□ -1.85
HMGB1P35-201ENST00000503360 SLKQ9H2G2 1235 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P35-201ENST00000503360 NCOA5Q9HCD5 579 aaKnown RBP3.52□□□□□ -1.85
HMGB1P35-201ENST00000503360 GPRC5BQ9NZH0 403 aa3.52□□□□□ -1.85
HMGB1P35-201ENST00000503360 PTGFRNQ9P2B2 879 aa3.52□□□□□ -1.85
HMGB1P35-201ENST00000503360 PACSIN3Q9UKS6 424 aa3.52□□□□□ -1.85
HMGB1P35-201ENST00000503360 DSEQ9UL01 958 aa3.52□□□□□ -1.85
HMGB1P35-201ENST00000503360 TELO2Q9Y4R8 837 aa3.52□□□□□ -1.85
HMGB1P35-201ENST00000503360 CD2APQ9Y5K6 639 aa3.52□□□□□ -1.85
HMGB1P35-201ENST00000503360 CAPN14A8MX76 684 aa3.51□□□□□ -1.85
HMGB1P35-201ENST00000503360 ACOT7O00154 380 aa3.51□□□□□ -1.85
HMGB1P35-201ENST00000503360 PLD2O14939 933 aa3.51□□□□□ -1.85
HMGB1P35-201ENST00000503360 SLC26A4O43511 780 aa3.51□□□□□ -1.85
HMGB1P35-201ENST00000503360 MAFO75444 373 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P35-201ENST00000503360 CD38P28907 300 aa3.51□□□□□ -1.85
HMGB1P35-201ENST00000503360 GYS2P54840 703 aa3.51□□□□□ -1.85
HMGB1P35-201ENST00000503360 NTRK3Q16288 839 aa3.51□□□□□ -1.85
HMGB1P35-201ENST00000503360 KIZQ2M2Z5 673 aa3.51□□□□□ -1.85
HMGB1P35-201ENST00000503360 SPTY2D1Q68D10 685 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P35-201ENST00000503360 RHOUQ7L0Q8 258 aa3.51□□□□□ -1.85
HMGB1P35-201ENST00000503360 GPR135Q8IZ08 494 aa3.51□□□□□ -1.85
HMGB1P35-201ENST00000503360 D2HGDHQ8N465 521 aa3.51□□□□□ -1.85
HMGB1P35-201ENST00000503360 NTN5Q8WTR8 489 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P35-201ENST00000503360 HAS1Q92839 578 aa3.51□□□□□ -1.85
HMGB1P35-201ENST00000503360 WNK4Q96J92 1243 aa3.51□□□□□ -1.85
HMGB1P35-201ENST00000503360 JAM3Q9BX67 310 aa3.51□□□□□ -1.85
HMGB1P35-201ENST00000503360 ANKRD62A6NC57 917 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 HMGCRP04035 888 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 C6orf222P0C671 652 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 GJA4P35212 333 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 GABREP78334 506 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 SLC25A3Q00325 362 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 PABPC4Q13310 644 aaKnown RBP eCLIP3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 WDR72Q3MJ13 1102 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 DALRD3Q5D0E6 543 aaKnown RBP3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 TAF7LQ5H9L4 462 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 ZKSCAN2Q63HK3 967 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 KCNT2Q6UVM3 1135 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 MRGPREQ86SM8 312 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 NLGN4XQ8N0W4 816 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 SHCBP1Q8NEM2 672 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 DCAF4Q8WV16 495 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 PTPRN2Q92932 1015 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 LPPQ93052 612 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 CLUHP3Q96NS8 147 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 MRPL4Q9BYD3 311 aaKnown RBP3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 ADARB2Q9NS39 739 aaKnown RBP3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 NDOR1Q9UHB4 597 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 SFMBT1Q9UHJ3 866 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 TRAF6Q9Y4K3 522 aa3.5□□□□□ -1.85
HMGB1P35-201ENST00000503360 RFPL3O75679 317 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 NUDT3O95989 172 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 LTFP02788 710 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 GNAT1P11488 350 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 GRK2P25098 689 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 GRK3P35626 688 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 RRADP55042 308 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 TAP1Q03518 808 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 TOB2Q14106 344 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 FNDC3BQ53EP0 1204 aaKnown RBP3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 TRIM61Q5EBN2 209 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 TMEM200BQ69YZ2 307 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 STYK1Q6J9G0 422 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 LBX2Q6XYB7 198 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 HTR3DQ70Z44 454 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 LARP4Q71RC2 724 aaKnown RBP eCLIP3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 MAMDC2Q7Z304 686 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 GLCCI1Q86VQ1 547 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 DHX37Q8IY37 1157 aaKnown RBP3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 SLC7A14Q8TBB6 771 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 NINJ1Q92982 152 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 MIEF2Q96C03 454 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 PHF20Q9BVI0 1012 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 BTBD2Q9BX70 525 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 SLC52A2Q9HAB3 445 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 GALNT8Q9NY28 637 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 PLAAQ9Y263 795 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 VWA7Q9Y334 891 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 ASXL2Q76L83 1435 aa3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 POLR2AP24928 1970 aaKnown RBP3.49□□□□□ -1.85
HMGB1P35-201ENST00000503360 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 ZAR1LA6NP61 321 aa3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 MASP2O00187 686 aa3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 AQP7O14520 342 aa3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 EFCAB14O75071 495 aa3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 CDK4P11802 303 aa3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 SDSP20132 328 aa3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 CRHR2Q13324 411 aa3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 NOLC1Q14978 699 aaKnown RBP eCLIP3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 PCOLCEQ15113 449 aa3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 RNF187Q5TA31 235 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 MBNL2Q5VZF2 373 aaKnown RBP3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 BRAPQ7Z569 592 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms