RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 BAP1Q92560 729 aa5.63□□□□□ -1.51
CLDND1-208ENST00000503004 MTMR8Q96EF0 704 aa5.63□□□□□ -1.51
CLDND1-208ENST00000503004 MFRPQ9BY79 579 aa5.63□□□□□ -1.51
CLDND1-208ENST00000503004 TDRD3Q9H7E2 651 aaKnown RBP5.63□□□□□ -1.51
CLDND1-208ENST00000503004 DNAAF2Q9NVR5 837 aaKnown RBP5.63□□□□□ -1.51
CLDND1-208ENST00000503004 SMARCAL1Q9NZC9 954 aa5.63□□□□□ -1.51
CLDND1-208ENST00000503004 EHD2Q9NZN4 543 aa5.63□□□□□ -1.51
CLDND1-208ENST00000503004 TPX2Q9ULW0 747 aaKnown RBP5.63□□□□□ -1.51
CLDND1-208ENST00000503004 SMCHD1A6NHR9 2005 aa5.63□□□□□ -1.51
CLDND1-208ENST00000503004 ATXN2Q99700 1313 aaKnown RBP5.62□□□□□ -1.51
CLDND1-208ENST00000503004 A0A1W2PQJ5 194 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 FAM86B1E9PN63 330 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 BUB1O43683 1085 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 PPP1R37O75864 691 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 FAM86B2P0C5J1 330 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 LINGO3P0C6S8 592 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 CYP11B2P19099 503 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 DNA2P51530 1060 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 GNGT1P63211 74 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 FKBP3Q00688 224 aaKnown RBP5.62□□□□□ -1.51
CLDND1-208ENST00000503004 PABPC4Q13310 644 aaKnown RBP eCLIP5.62□□□□□ -1.514e-9■□□□□ 10.6
CLDND1-208ENST00000503004 TUBB2AQ13885 445 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 SNCBQ16143 134 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 CCDC40Q4G0X9 1142 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 ZCWPW2Q504Y3 356 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 TDRD12Q587J7 1177 aaKnown RBP5.62□□□□□ -1.51
CLDND1-208ENST00000503004 ARSHQ5FYA8 562 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 PAPD7Q5XG87 772 aaKnown RBP5.62□□□□□ -1.51
CLDND1-208ENST00000503004 PPP1R18Q6NYC8 613 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 SLC30A9Q6PML9 568 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 DPH6Q7L8W6 267 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 PODNQ7Z5L7 613 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 CCDC84Q86UT8 332 aaPredicted RBP5.62□□□□□ -1.51
CLDND1-208ENST00000503004 GPBP1Q86WP2 473 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 CATSPER3Q86XQ3 398 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 NLGN1Q8N2Q7 840 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 CAGE1Q8TC20 777 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 COG1Q8WTW3 980 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 SCFD1Q8WVM8 642 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 ZDHHC15Q96MV8 337 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 TUBB2BQ9BVA1 445 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 IQCGQ9H095 443 aaKnown RBP5.62□□□□□ -1.51
CLDND1-208ENST00000503004 VCPKMTQ9H867 229 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 BMP2KQ9NSY1 1161 aaPredicted RBP5.62□□□□□ -1.51
CLDND1-208ENST00000503004 PI4KBQ9UBF8 816 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 PCDHA13Q9Y5I0 950 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 COL4A3BPQ9Y5P4 624 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 MYH4Q9Y623 1939 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 FOCADQ5VW36 1801 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 ANKRD31Q8N7Z5 1873 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 A0A1W2PRG0 241 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 SHTN1A0MZ66 631 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 EIF4E1BA6NMX2 242 aaKnown RBP5.62□□□□□ -1.51
CLDND1-208ENST00000503004 MEFVO15553 781 aaPredicted RBP5.62□□□□□ -1.51
CLDND1-208ENST00000503004 NCK2O43639 380 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 ECE2O60344 883 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 TLR2O60603 784 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 ATP2C2O75185 946 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 KIAA0754O94854 1291 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 NDUFB10O96000 172 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 GH2P01242 217 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 KRT18P05783 430 aaKnown RBP5.62□□□□□ -1.51
CLDND1-208ENST00000503004 MYBL1P10243 752 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 CHRNA5P30532 468 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 MATR3P43243 847 aaKnown RBP eCLIP5.62□□□□□ -1.51
CLDND1-208ENST00000503004 GCLCP48506 637 aaPredicted RBP5.62□□□□□ -1.51
CLDND1-208ENST00000503004 ARHGAP4P98171 946 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 RASSF7Q02833 373 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 C2orf54Q08AI8 447 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 RRP1BQ14684 758 aaKnown RBP5.62□□□□□ -1.51
CLDND1-208ENST00000503004 NFRKBQ6P4R8 1299 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 DNAAF5Q86Y56 855 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 MAGEC3Q8TD91 643 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 KCNN1Q92952 543 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 MASTLQ96GX5 879 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 RBM41Q96IZ5 413 aaKnown RBP5.62□□□□□ -1.51
CLDND1-208ENST00000503004 CCDC114Q96M63 670 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 PURBQ96QR8 312 aaKnown RBP5.62□□□□□ -1.51
CLDND1-208ENST00000503004 TSG101Q99816 390 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 NT5C3AQ9H0P0 336 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 SH2D4AQ9H788 454 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 KCNMB3Q9NPA1 279 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 BATF3Q9NR55 127 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 EMILIN3Q9NT22 766 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 TRPC6Q9Y210 931 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 PCDHA2Q9Y5H9 948 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 LRRC37AA6NMS7 1700 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 MYO3BQ8WXR4 1341 aa5.62□□□□□ -1.51
CLDND1-208ENST00000503004 FAM170AA1A519 330 aa5.61□□□□□ -1.51
CLDND1-208ENST00000503004 TMEM88BA6NKF7 163 aa5.61□□□□□ -1.51
CLDND1-208ENST00000503004 POM121CA8CG34 1229 aa5.61□□□□□ -1.51
CLDND1-208ENST00000503004 RSPH10B2B2RC85 870 aa5.61□□□□□ -1.51
CLDND1-208ENST00000503004 NDUFAB1O14561 156 aa5.61□□□□□ -1.51
CLDND1-208ENST00000503004 NOL4O94818 638 aa5.61□□□□□ -1.51
CLDND1-208ENST00000503004 RSPH10BP0C881 870 aa5.61□□□□□ -1.51
CLDND1-208ENST00000503004 GNAT1P11488 350 aa5.61□□□□□ -1.51
CLDND1-208ENST00000503004 EIF4BP23588 611 aaKnown RBP5.61□□□□□ -1.51
CLDND1-208ENST00000503004 HNRNPH3P31942 346 aaKnown RBP5.61□□□□□ -1.51
CLDND1-208ENST00000503004 ECE1P42892 770 aa5.61□□□□□ -1.51
CLDND1-208ENST00000503004 ATP1A2P50993 1020 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms