RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 UMODL1Q5DID0 1318 aa17.82■□□□□ 0.44
SSBP1-214ENST00000498107 IGKV6-21A0A0C4DH24 114 aa17.82■□□□□ 0.44
SSBP1-214ENST00000498107 ARHGEF35A5YM69 484 aa17.82■□□□□ 0.44
SSBP1-214ENST00000498107 TMEM150BA6NC51 233 aa17.82■□□□□ 0.44
SSBP1-214ENST00000498107 CDC25AP30304 524 aa17.82■□□□□ 0.44
SSBP1-214ENST00000498107 RARRES1P49788 294 aa17.82■□□□□ 0.44
SSBP1-214ENST00000498107 MRPS6P82932 125 aaKnown RBP17.82■□□□□ 0.44
SSBP1-214ENST00000498107 ZRSR1Q15695 479 aaKnown RBP17.82■□□□□ 0.44
SSBP1-214ENST00000498107 KIAA0319LQ8IZA0 1049 aa17.82■□□□□ 0.44
SSBP1-214ENST00000498107 ZNF579Q8NAF0 562 aaKnown RBP17.82■□□□□ 0.44
SSBP1-214ENST00000498107 TCP11Q8WWU5 503 aa17.82■□□□□ 0.44
SSBP1-214ENST00000498107 CEP89Q96ST8 783 aa17.82■□□□□ 0.44
SSBP1-214ENST00000498107 MMTAG2Q9BU76 263 aaKnown RBP17.82■□□□□ 0.44
SSBP1-214ENST00000498107 CCSER1Q9C0I3 900 aa17.82■□□□□ 0.44
SSBP1-214ENST00000498107 DHX33Q9H6R0 707 aaKnown RBP17.82■□□□□ 0.44
SSBP1-214ENST00000498107 CCDC39Q9UFE4 941 aa17.82■□□□□ 0.44
SSBP1-214ENST00000498107 RCOR1Q9UKL0 485 aa17.82■□□□□ 0.44
SSBP1-214ENST00000498107 TANC1Q9C0D5 1861 aa17.82■□□□□ 0.44
SSBP1-214ENST00000498107 ZBTB39O15060 712 aa17.81■□□□□ 0.44
SSBP1-214ENST00000498107 CUTAO60888 179 aa17.81■□□□□ 0.44
SSBP1-214ENST00000498107 CSF2RAP15509 400 aa17.81■□□□□ 0.44
SSBP1-214ENST00000498107 BMP8BP34820 402 aa17.81■□□□□ 0.44
SSBP1-214ENST00000498107 ME1P48163 572 aa17.81■□□□□ 0.44
SSBP1-214ENST00000498107 LINC01465Q8N7H1 131 aa17.81■□□□□ 0.44
SSBP1-214ENST00000498107 ZBTB10Q96DT7 871 aa17.81■□□□□ 0.44
SSBP1-214ENST00000498107 SCLYQ96I15 445 aa17.81■□□□□ 0.44
SSBP1-214ENST00000498107 SPATA32Q96LK8 384 aa17.81■□□□□ 0.44
SSBP1-214ENST00000498107 MTRQ99707 1265 aa17.81■□□□□ 0.44
SSBP1-214ENST00000498107 GDF15Q99988 308 aa17.81■□□□□ 0.44
SSBP1-214ENST00000498107 SH2D3AQ9BRG2 576 aa17.81■□□□□ 0.44
SSBP1-214ENST00000498107 ATP6V0A4Q9HBG4 840 aa17.81■□□□□ 0.44
SSBP1-214ENST00000498107 IL23AQ9NPF7 189 aa17.81■□□□□ 0.44
SSBP1-214ENST00000498107 CHMP5Q9NZZ3 219 aa17.81■□□□□ 0.44
SSBP1-214ENST00000498107 AKT3Q9Y243 479 aa17.81■□□□□ 0.44
SSBP1-214ENST00000498107 TRPV2Q9Y5S1 764 aa17.81■□□□□ 0.44
SSBP1-214ENST00000498107 ARID2Q68CP9 1835 aa17.8■□□□□ 0.44
SSBP1-214ENST00000498107 EYA4O95677 639 aa17.8■□□□□ 0.44
SSBP1-214ENST00000498107 CTSHP09668 335 aa17.8■□□□□ 0.44
SSBP1-214ENST00000498107 CLCN3P51790 818 aa17.8■□□□□ 0.44
SSBP1-214ENST00000498107 GRIN1Q05586 938 aa17.8■□□□□ 0.44
SSBP1-214ENST00000498107 EMC2Q15006 297 aa17.8■□□□□ 0.44
SSBP1-214ENST00000498107 ECM1Q16610 540 aa17.8■□□□□ 0.44
SSBP1-214ENST00000498107 PSRC1Q6PGN9 363 aaPredicted RBP17.8■□□□□ 0.44
SSBP1-214ENST00000498107 FAM43BQ6ZT52 329 aaPredicted RBP17.8■□□□□ 0.44
SSBP1-214ENST00000498107 LRRC71Q8N4P6 559 aa17.8■□□□□ 0.44
SSBP1-214ENST00000498107 MCPH1Q8NEM0 835 aa17.8■□□□□ 0.44
SSBP1-214ENST00000498107 CLIC6Q96NY7 704 aa17.8■□□□□ 0.44
SSBP1-214ENST00000498107 IPO9Q96P70 1041 aaKnown RBP17.8■□□□□ 0.44
SSBP1-214ENST00000498107 UBE2OQ9C0C9 1292 aaKnown RBP17.8■□□□□ 0.44
SSBP1-214ENST00000498107 BHMT2Q9H2M3 363 aa17.8■□□□□ 0.44
SSBP1-214ENST00000498107 CDY2AQ9Y6F7 541 aa17.8■□□□□ 0.44
SSBP1-214ENST00000498107 SQORQ9Y6N5 450 aa17.8■□□□□ 0.44
SSBP1-214ENST00000498107 ASAP2O43150 1006 aa17.79■□□□□ 0.44
SSBP1-214ENST00000498107 GRB10Q13322 594 aa17.79■□□□□ 0.44
SSBP1-214ENST00000498107 TMEM119Q4V9L6 283 aa17.79■□□□□ 0.44
SSBP1-214ENST00000498107 ODR4Q5SWX8 454 aa17.79■□□□□ 0.44
SSBP1-214ENST00000498107 TRAF7Q6Q0C0 670 aa17.79■□□□□ 0.44
SSBP1-214ENST00000498107 USP38Q8NB14 1042 aa17.79■□□□□ 0.44
SSBP1-214ENST00000498107 PSPC1Q8WXF1 523 aaKnown RBP17.79■□□□□ 0.44
SSBP1-214ENST00000498107 SYMPKQ92797 1274 aaKnown RBP17.79■□□□□ 0.44
SSBP1-214ENST00000498107 CELF4Q9BZC1 486 aaKnown RBP17.79■□□□□ 0.44
SSBP1-214ENST00000498107 SUCLA2Q9P2R7 463 aaPredicted RBP17.79■□□□□ 0.44
SSBP1-214ENST00000498107 E9PMD0 336 aa17.78■□□□□ 0.44
SSBP1-214ENST00000498107 CHRNA1P02708 482 aa17.78■□□□□ 0.44
SSBP1-214ENST00000498107 CXCL10P02778 98 aa17.78■□□□□ 0.44
SSBP1-214ENST00000498107 ACTN1P12814 892 aa17.78■□□□□ 0.44
SSBP1-214ENST00000498107 MGAT3Q09327 533 aa17.78■□□□□ 0.44
SSBP1-214ENST00000498107 MXD4Q14582 209 aaPredicted RBP17.78■□□□□ 0.44
SSBP1-214ENST00000498107 PADI6Q6TGC4 694 aa17.78■□□□□ 0.44
SSBP1-214ENST00000498107 CCDC73Q6ZRK6 1079 aa17.78■□□□□ 0.44
SSBP1-214ENST00000498107 LEO1Q8WVC0 666 aaPredicted RBP17.78■□□□□ 0.44
SSBP1-214ENST00000498107 EPSTI1Q96J88 318 aa17.78■□□□□ 0.44
SSBP1-214ENST00000498107 PNMA5Q96PV4 448 aa17.78■□□□□ 0.44
SSBP1-214ENST00000498107 MTIF3Q9H2K0 278 aaKnown RBP17.78■□□□□ 0.44
SSBP1-214ENST00000498107 TCHHQ07283 1943 aa17.77■□□□□ 0.44
SSBP1-214ENST00000498107 A0A087WWV3 80 aa17.77■□□□□ 0.44
SSBP1-214ENST00000498107 USO1O60763 962 aaKnown RBP17.77■□□□□ 0.44
SSBP1-214ENST00000498107 VTNP04004 478 aa17.77■□□□□ 0.44
SSBP1-214ENST00000498107 CYP11B2P19099 503 aa17.77■□□□□ 0.44
SSBP1-214ENST00000498107 CRYBB1P53674 252 aaPredicted RBP17.77■□□□□ 0.44
SSBP1-214ENST00000498107 TMEM62Q0P6H9 643 aa17.77■□□□□ 0.44
SSBP1-214ENST00000498107 KARSQ15046 597 aaKnown RBP17.77■□□□□ 0.44
SSBP1-214ENST00000498107 SPECC1Q5M775 1068 aa17.77■□□□□ 0.44
SSBP1-214ENST00000498107 RRAGBQ5VZM2 374 aa17.77■□□□□ 0.44
SSBP1-214ENST00000498107 CHRDL2Q6WN34 429 aa17.77■□□□□ 0.44
SSBP1-214ENST00000498107 DEFB128Q7Z7B8 93 aa17.77■□□□□ 0.44
SSBP1-214ENST00000498107 ZNF410Q86VK4 478 aa17.77■□□□□ 0.44
SSBP1-214ENST00000498107 APBB2Q92870 758 aa17.77■□□□□ 0.44
SSBP1-214ENST00000498107 SCLT1Q96NL6 688 aa17.77■□□□□ 0.44
SSBP1-214ENST00000498107 FAM13BQ9NYF5 915 aa17.77■□□□□ 0.44
SSBP1-214ENST00000498107 KCND2Q9NZV8 630 aa17.77■□□□□ 0.44
SSBP1-214ENST00000498107 STK17AQ9UEE5 414 aa17.77■□□□□ 0.44
SSBP1-214ENST00000498107 PCDHA7Q9UN72 937 aa17.77■□□□□ 0.44
SSBP1-214ENST00000498107 A0A1W2PPC1 479 aa17.76■□□□□ 0.43
SSBP1-214ENST00000498107 NBNO60934 754 aa17.76■□□□□ 0.43
SSBP1-214ENST00000498107 FGBP02675 491 aa17.76■□□□□ 0.43
SSBP1-214ENST00000498107 PLCG1P19174 1290 aa17.76■□□□□ 0.43
SSBP1-214ENST00000498107 NLRP11P59045 1033 aaKnown RBP17.76■□□□□ 0.43
SSBP1-214ENST00000498107 MKRN4PQ13434 485 aaPredicted RBP17.76■□□□□ 0.43
SSBP1-214ENST00000498107 TFDP1Q14186 410 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms