RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 HMGCRP04035 888 aa4.46□□□□□ -1.7
RBM28-207ENST00000488249 ZNF888P0CJ79 500 aaPredicted RBP4.46□□□□□ -1.7
RBM28-207ENST00000488249 BPIP17213 487 aa4.46□□□□□ -1.7
RBM28-207ENST00000488249 CD40P25942 277 aa4.46□□□□□ -1.7
RBM28-207ENST00000488249 KCNQ1P51787 676 aa4.46□□□□□ -1.7
RBM28-207ENST00000488249 LRRC32Q14392 662 aa4.46□□□□□ -1.7
RBM28-207ENST00000488249 GPR158Q5T848 1215 aa4.46□□□□□ -1.7
RBM28-207ENST00000488249 PRAMEF9Q5VWM5 478 aa4.46□□□□□ -1.7
RBM28-207ENST00000488249 SLFN12LQ6IEE8 588 aa4.46□□□□□ -1.7
RBM28-207ENST00000488249 OTOP2Q7RTS6 562 aa4.46□□□□□ -1.7
RBM28-207ENST00000488249 GPR155Q7Z3F1 870 aa4.46□□□□□ -1.7
RBM28-207ENST00000488249 C11orf74Q86VG3 221 aa4.46□□□□□ -1.7
RBM28-207ENST00000488249 PHYKPLQ8IUZ5 450 aa4.46□□□□□ -1.7
RBM28-207ENST00000488249 CXorf38Q8TB03 319 aa4.46□□□□□ -1.7
RBM28-207ENST00000488249 RTF1Q92541 710 aaKnown RBP4.46□□□□□ -1.7
RBM28-207ENST00000488249 USP7Q93009 1102 aa4.46□□□□□ -1.7
RBM28-207ENST00000488249 RELTQ969Z4 430 aa4.46□□□□□ -1.7
RBM28-207ENST00000488249 PUS7Q96PZ0 661 aaKnown RBP4.46□□□□□ -1.7
RBM28-207ENST00000488249 PTPN22Q9Y2R2 807 aa4.46□□□□□ -1.7
RBM28-207ENST00000488249 PRKAB1Q9Y478 270 aa4.46□□□□□ -1.7
RBM28-207ENST00000488249 ZEB2O60315 1214 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 PLATP00750 562 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 VIL1P09327 827 aaKnown RBP4.45□□□□□ -1.7
RBM28-207ENST00000488249 PPP2CBP62714 309 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 PPP2CAP67775 309 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 PHC1P78364 1004 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 MAP3K12Q12852 859 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 STRN3Q13033 797 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 MYBPC3Q14896 1274 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 TBC1D10BQ4KMP7 808 aaPredicted RBP4.45□□□□□ -1.7
RBM28-207ENST00000488249 LCE4AQ5TA78 99 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 TRIM68Q6AZZ1 485 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 TIGD7Q6NT04 549 aaPredicted RBP4.45□□□□□ -1.7
RBM28-207ENST00000488249 KRT26Q7Z3Y9 468 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 STRA8Q7Z7C7 330 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 C7orf31Q8N865 590 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 ZNF610Q8N9Z0 462 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 TMX1Q9H3N1 280 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 IFT22Q9H7X7 185 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 EMC7Q9NPA0 242 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 SLC4A7Q9Y6M7 1214 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 ZNF536O15090 1300 aa4.45□□□□□ -1.7
RBM28-207ENST00000488249 NEMP1O14524 444 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 LAMTOR5O43504 91 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 FOXD2O60548 495 aaPredicted RBP4.44□□□□□ -1.7
RBM28-207ENST00000488249 PRPF6O94906 941 aaKnown RBP4.44□□□□□ -1.7
RBM28-207ENST00000488249 LSP1P33241 339 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 ID4P47928 161 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 EPHB4P54760 987 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 RRADP55042 308 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 BCAR1P56945 870 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 ADCY2Q08462 1091 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 NOLC1Q14978 699 aaKnown RBP eCLIP4.44□□□□□ -1.7
RBM28-207ENST00000488249 TERF2Q15554 542 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 ZNF827Q17R98 1081 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 ATP13A4Q4VNC1 1196 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 ZMAT1Q5H9K5 638 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 CT47A1Q5JQC4 288 aaPredicted RBP4.44□□□□□ -1.7
RBM28-207ENST00000488249 ERICH6BQ5W0A0 696 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 ARHGEF18Q6ZSZ5 1173 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 LARP4Q71RC2 724 aaKnown RBP eCLIP4.44□□□□□ -1.7
RBM28-207ENST00000488249 KANSL1Q7Z3B3 1105 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 BCL6BQ8N143 479 aaPredicted RBP4.44□□□□□ -1.7
RBM28-207ENST00000488249 RPGRQ92834 1020 aaKnown RBP4.44□□□□□ -1.7
RBM28-207ENST00000488249 TTC1Q99614 292 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 MYL10Q9BUA6 226 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 BDH2Q9BUT1 245 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 POFUT1Q9H488 388 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 KCMF1Q9P0J7 381 aa4.44□□□□□ -1.7
RBM28-207ENST00000488249 USP36Q9P275 1121 aaKnown RBP4.44□□□□□ -1.7
RBM28-207ENST00000488249 SBNO2Q9Y2G9 1366 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 APOL3O95236 402 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 CNOT4O95628 575 aaKnown RBP4.43□□□□□ -1.7
RBM28-207ENST00000488249 SYN1P17600 705 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 CNGA1P29973 690 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 MEOX1P50221 254 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 STAT5BP51692 787 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 PCOLCEQ15113 449 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 DDB1Q16531 1140 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 DGKDQ16760 1214 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 ZNF568Q3ZCX4 644 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 BROXQ5VW32 411 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 KIAA1841Q6NSI8 718 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 FILIP1Q7Z7B0 1213 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 RTKN2Q8IZC4 609 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 AFAP1L2Q8N4X5 818 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 OR5AN1Q8NGI8 311 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 SLC5A5Q92911 643 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 ZNF496Q96IT1 587 aaPredicted RBP4.43□□□□□ -1.7
RBM28-207ENST00000488249 RBM15Q96T37 977 aaKnown RBP eCLIP4.43□□□□□ -1.73e-11■■■□□ 15.8
RBM28-207ENST00000488249 KIAA1683Q9H0B3 1180 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 SEMA4AQ9H3S1 761 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 MS4A5Q9H3V2 200 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 JADE2Q9NQC1 790 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 PPP4R1LQ9P1A2 415 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 SAE1Q9UBE0 346 aaPredicted RBP4.43□□□□□ -1.7
RBM28-207ENST00000488249 MAGEL2Q9UJ55 1249 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 MSRAQ9UJ68 235 aa4.43□□□□□ -1.7
RBM28-207ENST00000488249 APOBEC2Q9Y235 224 aaKnown RBP4.43□□□□□ -1.7
RBM28-207ENST00000488249 LCHNA4D1U4 455 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms