RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	RSPH10B	P0C881	870 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	MAPT	P10636	758 aa	Known RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	CYP2C9	P11712	490 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	SKI	P12755	728 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	CYP11B2	P19099	503 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	EIF4B	P23588	611 aa	Known RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	AXL	P30530	894 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	ANP32A	P39687	249 aa	Known RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	TXLNA	P40222	546 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	TEC	P42680	631 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	MAGEA10	P43363	369 aa	Predicted RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	ZNF131	P52739	623 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	EFNA5	P52803	228 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	CRYBB1	P53674	252 aa	Predicted RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	ATN1	P54259	1190 aa	Predicted RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	KRT85	P78386	507 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	MRPS6	P82932	125 aa	Known RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	POU5F1	Q01860	360 aa	Known RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	HIC1	Q14526	733 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	GPNMB	Q14956	572 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	ZNF174	Q15697	407 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	UGCG	Q16739	394 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	FAM187B	Q17R55	369 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	FAM47C	Q5HY64	1035 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	FBXO47	Q5MNV8	452 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	UTP14C	Q5TAP6	766 aa	Known RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	CDCA2	Q69YH5	1023 aa	Predicted RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	ADAL	Q6DHV7	355 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	NCAPH2	Q6IBW4	605 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	PPP4R3CP	Q6ZMV5	832 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	CCDC73	Q6ZRK6	1079 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	CRIPAK	Q8N1N5	446 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	SYT2	Q8N9I0	419 aa	Predicted RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	TMEM174	Q8WUU8	243 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	PSPC1	Q8WXF1	523 aa	Known RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	SEPT8	Q92599	483 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	VWCE	Q96DN2	955 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	USP28	Q96RU2	1077 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	MTR	Q99707	1265 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	MMTAG2	Q9BU76	263 aa	Known RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	CELF4	Q9BZC1	486 aa	Known RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	LRRC27	Q9C0I9	530 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	TRPV6	Q9H1D0	765 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	ST6GALNAC4	Q9H4F1	302 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	ELAC1	Q9H777	363 aa	Known RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	ATP6V0A4	Q9HBG4	840 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	C1orf112	Q9NSG2	853 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	SEL1L	Q9UBV2	794 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	CCDC39	Q9UFE4	941 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	FBXO2	Q9UK22	296 aa	Predicted RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	DNM3	Q9UQ16	869 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	RBM19	Q9Y4C8	960 aa	Known RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	TRPV2	Q9Y5S1	764 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	LAMA2	P24043	3122 aa	Known RBP	5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	TRANK1	O15050	2925 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	GPR182	O15218	404 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	SPTLC2	O15270	562 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	INPPL1	O15357	1258 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	ZNF623	O75123	536 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	GPR32	O75388	356 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	CHRNA1	P02708	482 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	DARS	P14868	501 aa	Known RBP	5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	PTGS1	P23219	599 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	SFPQ	P23246	707 aa	Known RBP eCLIP	5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	CMA1	P23946	247 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	ITGB8	P26012	769 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	ARL2	P36404	184 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	UBA7	P41226	1012 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	NAMPT	P43490	491 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	RAB27A	P51159	221 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	GPC3	P51654	580 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	POLG	P54098	1239 aa	Predicted RBP	5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	IKBKE	Q14164	716 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	TFDP1	Q14186	410 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	MBTPS1	Q14703	1052 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	EMC2	Q15006	297 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	IL17A	Q16552	155 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	CSPP1	Q1MSJ5	1256 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	TMEM240	Q5SV17	173 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	AXDND1	Q5T1B0	1012 aa	Predicted RBP	5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	ZNF618	Q5T7W0	954 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	SH3RF1	Q7Z6J0	888 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	FERMT3	Q86UX7	667 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	CKAP2L	Q8IYA6	745 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	TMEM87A	Q8NBN3	555 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	CNNM3	Q8NE01	707 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	SNX29	Q8TEQ0	813 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	SPIRE2	Q8WWL2	714 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	CALML4	Q96GE6	196 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	CCDC34	Q96HJ3	373 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	DYDC2	Q96IM9	177 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	ZFP91	Q96JP5	570 aa	Predicted RBP	5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	CEP170P1	Q96L14	293 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	DRC1	Q96MC2	740 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	TSPAN18	Q96SJ8	248 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	IFIH1	Q9BYX4	1025 aa	Known RBP	5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	GTPBP4	Q9BZE4	634 aa	Known RBP	5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	C2orf40	Q9H1Z8	148 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	TSPYL2	Q9H2G4	693 aa	Predicted RBP	5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	TNMD	Q9H2S6	317 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms