RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 AKT3Q9Y243 479 aa25.05■■□□□ 1.6
SF1-214ENST00000477596 PCDHA11Q9Y5I1 949 aa25.05■■□□□ 1.6
SF1-214ENST00000477596 EFCAB14O75071 495 aa25.04■■□□□ 1.6
SF1-214ENST00000477596 SLITRK3O94933 977 aa25.04■■□□□ 1.6
SF1-214ENST00000477596 C4orf19Q8IY42 314 aa25.04■■□□□ 1.6
SF1-214ENST00000477596 MYOCDQ8IZQ8 938 aa25.04■■□□□ 1.6
SF1-214ENST00000477596 LINC01599Q8WXQ3 324 aa25.04■■□□□ 1.6
SF1-214ENST00000477596 APBB2Q92870 758 aa25.04■■□□□ 1.6
SF1-214ENST00000477596 HSD17B14Q9BPX1 270 aa25.04■■□□□ 1.6
SF1-214ENST00000477596 ZSWIM4Q9H7M6 989 aa25.04■■□□□ 1.6
SF1-214ENST00000477596 CYP26B1Q9NR63 512 aa25.04■■□□□ 1.6
SF1-214ENST00000477596 BMP2KQ9NSY1 1161 aaPredicted RBP25.04■■□□□ 1.6
SF1-214ENST00000477596 A0A087WWV3 80 aa25.03■■□□□ 1.6
SF1-214ENST00000477596 VPS37CA5D8V6 355 aaPredicted RBP25.03■■□□□ 1.6
SF1-214ENST00000477596 GPR32O75388 356 aa25.03■■□□□ 1.6
SF1-214ENST00000477596 CA3P07451 260 aa25.03■■□□□ 1.6
SF1-214ENST00000477596 YWHABP31946 246 aaKnown RBP25.03■■□□□ 1.6
SF1-214ENST00000477596 PTGDRQ13258 359 aa25.03■■□□□ 1.6
SF1-214ENST00000477596 SNX21Q969T3 373 aa25.03■■□□□ 1.6
SF1-214ENST00000477596 MAP7D2Q96T17 732 aa25.03■■□□□ 1.6
SF1-214ENST00000477596 ZNF576Q9H609 170 aa25.03■■□□□ 1.6
SF1-214ENST00000477596 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.03■■□□□ 1.6
SF1-214ENST00000477596 NOC2LQ9Y3T9 749 aaKnown RBP25.03■■□□□ 1.6
SF1-214ENST00000477596 CHD7Q9P2D1 2997 aa25.03■■□□□ 1.6
SF1-214ENST00000477596 TMEM265A0A087WTH1 108 aa25.02■■□□□ 1.6
SF1-214ENST00000477596 IGKV6-21A0A0C4DH24 114 aa25.02■■□□□ 1.6
SF1-214ENST00000477596 LCHNA4D1U4 455 aa25.02■■□□□ 1.6
SF1-214ENST00000477596 DKC1O60832 514 aaKnown RBP eCLIP25.02■■□□□ 1.6
SF1-214ENST00000477596 CEP170P1Q96L14 293 aa25.02■■□□□ 1.6
SF1-214ENST00000477596 PADI3Q9ULW8 664 aa25.02■■□□□ 1.6
SF1-214ENST00000477596 TLL1O43897 1013 aa25.01■■□□□ 1.59
SF1-214ENST00000477596 MAFO75444 373 aaPredicted RBP25.01■■□□□ 1.59
SF1-214ENST00000477596 MED24O75448 989 aa25.01■■□□□ 1.59
SF1-214ENST00000477596 AMHP03971 560 aa25.01■■□□□ 1.59
SF1-214ENST00000477596 TMOD1P28289 359 aa25.01■■□□□ 1.59
SF1-214ENST00000477596 NLRP11P59045 1033 aaKnown RBP25.01■■□□□ 1.59
SF1-214ENST00000477596 PAK2Q13177 524 aa25.01■■□□□ 1.59
SF1-214ENST00000477596 GRIN2CQ14957 1233 aa25.01■■□□□ 1.59
SF1-214ENST00000477596 SPRED2Q7Z698 418 aa25.01■■□□□ 1.59
SF1-214ENST00000477596 FERMT3Q86UX7 667 aa25.01■■□□□ 1.59
SF1-214ENST00000477596 NEK9Q8TD19 979 aa25.01■■□□□ 1.59
SF1-214ENST00000477596 INTS4Q96HW7 963 aaKnown RBP25.01■■□□□ 1.59
SF1-214ENST00000477596 ADAMTS10Q9H324 1103 aa25.01■■□□□ 1.59
SF1-214ENST00000477596 TMX1Q9H3N1 280 aa25.01■■□□□ 1.59
SF1-214ENST00000477596 GJB5O95377 273 aa25■■□□□ 1.59
SF1-214ENST00000477596 SPATA31C1P0DKV0 1188 aa25■■□□□ 1.59
SF1-214ENST00000477596 GPC3P51654 580 aa25■■□□□ 1.59
SF1-214ENST00000477596 RILPL1Q5EBL4 403 aa25■■□□□ 1.59
SF1-214ENST00000477596 XKR9Q5GH70 373 aa25■■□□□ 1.59
SF1-214ENST00000477596 PPP2R2DQ66LE6 453 aa25■■□□□ 1.59
SF1-214ENST00000477596 FAM228AQ86W67 206 aa25■■□□□ 1.59
SF1-214ENST00000477596 ZBED2Q9BTP6 218 aa25■■□□□ 1.59
SF1-214ENST00000477596 ERVK-5Q9HDB9 667 aa25■■□□□ 1.59
SF1-214ENST00000477596 SQORQ9Y6N5 450 aa25■■□□□ 1.59
SF1-214ENST00000477596 UPP2O95045 317 aa24.99■■□□□ 1.59
SF1-214ENST00000477596 LYPLA2O95372 231 aa24.99■■□□□ 1.59
SF1-214ENST00000477596 CRYBB1P53674 252 aaPredicted RBP24.99■■□□□ 1.59
SF1-214ENST00000477596 IL17AQ16552 155 aa24.99■■□□□ 1.59
SF1-214ENST00000477596 HSCBQ8IWL3 235 aa24.99■■□□□ 1.59
SF1-214ENST00000477596 USP38Q8NB14 1042 aa24.99■■□□□ 1.59
SF1-214ENST00000477596 PIGOQ8TEQ8 1089 aa24.99■■□□□ 1.59
SF1-214ENST00000477596 CDX2Q99626 313 aaPredicted RBP24.99■■□□□ 1.59
SF1-214ENST00000477596 SLC28A3Q9HAS3 691 aa24.99■■□□□ 1.59
SF1-214ENST00000477596 MGEA5O60502 916 aa24.98■■□□□ 1.59
SF1-214ENST00000477596 RPS6KA5O75582 802 aa24.98■■□□□ 1.59
SF1-214ENST00000477596 SYT1P21579 422 aa24.98■■□□□ 1.59
SF1-214ENST00000477596 FXR2P51116 673 aaKnown RBP eCLIP24.98■■□□□ 1.59
SF1-214ENST00000477596 POLGP54098 1239 aaPredicted RBP24.98■■□□□ 1.59
SF1-214ENST00000477596 NFX1Q12986 1120 aaKnown RBP24.98■■□□□ 1.59
SF1-214ENST00000477596 POTEGQ6S5H5 508 aa24.98■■□□□ 1.59
SF1-214ENST00000477596 RTN4RL1Q86UN2 441 aaPredicted RBP24.98■■□□□ 1.59
SF1-214ENST00000477596 CATSPER3Q86XQ3 398 aa24.98■■□□□ 1.59
SF1-214ENST00000477596 MYLIPQ8WY64 445 aa24.98■■□□□ 1.59
SF1-214ENST00000477596 DHX33Q9H6R0 707 aaKnown RBP24.98■■□□□ 1.59
SF1-214ENST00000477596 SUCLA2Q9P2R7 463 aaPredicted RBP24.98■■□□□ 1.59
SF1-214ENST00000477596 PP2D1A8MPX8 630 aa24.97■■□□□ 1.59
SF1-214ENST00000477596 ENPP3O14638 875 aa24.97■■□□□ 1.59
SF1-214ENST00000477596 EMC2Q15006 297 aa24.97■■□□□ 1.59
SF1-214ENST00000477596 OTUD6AQ7L8S5 288 aa24.97■■□□□ 1.59
SF1-214ENST00000477596 KSR1Q8IVT5 923 aa24.97■■□□□ 1.59
SF1-214ENST00000477596 SLC7A3Q8WY07 619 aa24.97■■□□□ 1.59
SF1-214ENST00000477596 TMEM143Q96AN5 459 aa24.97■■□□□ 1.59
SF1-214ENST00000477596 SCLT1Q96NL6 688 aa24.97■■□□□ 1.59
SF1-214ENST00000477596 CERS4Q9HA82 394 aa24.97■■□□□ 1.59
SF1-214ENST00000477596 ST3GAL5Q9UNP4 418 aa24.97■■□□□ 1.59
SF1-214ENST00000477596 MYO9BQ13459 2157 aa24.96■■□□□ 1.59
SF1-214ENST00000477596 CSDE1O75534 798 aaKnown RBP24.96■■□□□ 1.59
SF1-214ENST00000477596 PDCP20941 246 aa24.96■■□□□ 1.59
SF1-214ENST00000477596 FGFR4P22455 802 aa24.96■■□□□ 1.59
SF1-214ENST00000477596 RFC5P40937 340 aa24.96■■□□□ 1.59
SF1-214ENST00000477596 TAP1Q03518 808 aa24.96■■□□□ 1.59
SF1-214ENST00000477596 ECM1Q16610 540 aa24.96■■□□□ 1.59
SF1-214ENST00000477596 RHPN2Q8IUC4 686 aa24.96■■□□□ 1.59
SF1-214ENST00000477596 NLRP7Q8WX94 980 aa24.96■■□□□ 1.59
SF1-214ENST00000477596 TOP1MTQ969P6 601 aa24.96■■□□□ 1.59
SF1-214ENST00000477596 POLR3CQ9BUI4 534 aaPredicted RBP24.96■■□□□ 1.59
SF1-214ENST00000477596 PRDM12Q9H4Q4 367 aa24.96■■□□□ 1.59
SF1-214ENST00000477596 TUFT1Q9NNX1 390 aa24.96■■□□□ 1.59
SF1-214ENST00000477596 XPNPEP1Q9NQW7 623 aa24.96■■□□□ 1.59
SF1-214ENST00000477596 TTC3P53804 2025 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms