RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 INSL6Q9Y581 213 aa9.3□□□□□ -0.92
HDAC6-221ENST00000477561 CHD7Q9P2D1 2997 aa9.3□□□□□ -0.92
HDAC6-221ENST00000477561 SIP14410 1827 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 LINC01553A4QN01 128 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 TBX3O15119 743 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 MAGEB2O15479 319 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 RPS6KA5O75582 802 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 MCM7P33993 719 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 TXKP42681 527 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 NLRP11P59045 1033 aaKnown RBP9.29□□□□□ -0.92
HDAC6-221ENST00000477561 PSMC5P62195 406 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 HMGN5P82970 282 aaKnown RBP9.29□□□□□ -0.92
HDAC6-221ENST00000477561 CYP4A11Q02928 519 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 TBC1D8BQ0IIM8 1120 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 PPP2R5CQ13362 524 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 DRP2Q13474 957 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 GNL2Q13823 731 aaKnown RBP9.29□□□□□ -0.92
HDAC6-221ENST00000477561 CALCRLQ16602 461 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 XKR3Q5GH77 459 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 PLA2G4FQ68DD2 849 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 LINC01599Q8WXQ3 324 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 DYDC2Q96IM9 177 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 YME1L1Q96TA2 773 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 C17orf80Q9BSJ5 609 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 TMX1Q9H3N1 280 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 PRDM6Q9NQX0 595 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 WRAP73Q9P2S5 460 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-221ENST00000477561 ST3GAL5Q9UNP4 418 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 KDM3AQ9Y4C1 1321 aa9.29□□□□□ -0.92
HDAC6-221ENST00000477561 MICAL3Q7RTP6 2002 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 ZBTB39O15060 712 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 NEMFO60524 1076 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 GPR32O75388 356 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 P4HBP07237 508 aaKnown RBP9.28□□□□□ -0.92
HDAC6-221ENST00000477561 TMOD1P28289 359 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 QARSP47897 775 aaKnown RBP9.28□□□□□ -0.92
HDAC6-221ENST00000477561 CRYBB1P53674 252 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-221ENST00000477561 NPEPPSP55786 919 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 HTRA4P83105 476 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-221ENST00000477561 SPIRE1Q08AE8 756 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 GRB10Q13322 594 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 CTTNQ14247 550 aaKnown RBP9.28□□□□□ -0.92
HDAC6-221ENST00000477561 EPHA7Q15375 998 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 TARBP2Q15633 366 aaKnown RBP9.28□□□□□ -0.92
HDAC6-221ENST00000477561 ZNF174Q15697 407 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 ANO5Q75V66 913 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 TPH2Q8IWU9 490 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 SLFN12Q8IYM2 578 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 LINC01465Q8N7H1 131 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 ZNF579Q8NAF0 562 aaKnown RBP9.28□□□□□ -0.92
HDAC6-221ENST00000477561 FBXO18Q8NFZ0 1043 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 GDPD5Q8WTR4 605 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 INTS4Q96HW7 963 aaKnown RBP9.28□□□□□ -0.92
HDAC6-221ENST00000477561 TMX3Q96JJ7 454 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 TGS1Q96RS0 853 aaKnown RBP9.28□□□□□ -0.92
HDAC6-221ENST00000477561 MAP7D2Q96T17 732 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 LXNQ9BS40 222 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 NIFKQ9BYG3 293 aaKnown RBP9.28□□□□□ -0.92
HDAC6-221ENST00000477561 TMEM60Q9H2L4 133 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 TTC12Q9H892 705 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-221ENST00000477561 BMP2KQ9NSY1 1161 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-221ENST00000477561 PCDHA12Q9UN75 941 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 SQORQ9Y6N5 450 aa9.28□□□□□ -0.92
HDAC6-221ENST00000477561 MYH9P35579 1960 aaKnown RBP9.28□□□□□ -0.92
HDAC6-221ENST00000477561 A0A087WWV3 80 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 MGEA5O60502 916 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 LPXNO60711 386 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 CSDE1O75534 798 aaKnown RBP9.27□□□□□ -0.93
HDAC6-221ENST00000477561 FGFR4P22455 802 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 GATMP50440 423 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 GPC3P51654 580 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 ERVK-21P61565 698 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 CUL4AQ13619 759 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 NBR1Q14596 966 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 FAM228AQ86W67 206 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 KSR1Q8IVT5 923 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.27□□□□□ -0.93
HDAC6-221ENST00000477561 FIBCD1Q8N539 461 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 SP7Q8TDD2 431 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-221ENST00000477561 CEP170P1Q96L14 293 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 SCLT1Q96NL6 688 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 MTMR9Q96QG7 549 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 CEP89Q96ST8 783 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 ADAM2Q99965 735 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 EIF2AK1Q9BQI3 630 aaKnown RBP9.27□□□□□ -0.93
HDAC6-221ENST00000477561 FTHL17Q9BXU8 183 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 ADAMTS10Q9H324 1103 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 FOXP1Q9H334 677 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-221ENST00000477561 ERVK-5Q9HDB9 667 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 CYP26B1Q9NR63 512 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 CIZ1Q9ULV3 898 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-221ENST00000477561 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-221ENST00000477561 MTCH2Q9Y6C9 303 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 EVPLQ92817 2033 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 UNC80Q8N2C7 3258 aa9.27□□□□□ -0.93
HDAC6-221ENST00000477561 PRUNE2Q8WUY3 3088 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 DENND3A2RUS2 1198 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 POTEMA6NI47 508 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 GPR182O15218 404 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 GTPBP6O43824 516 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms