RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 KIF3BO15066 747 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 APOL3O95236 402 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 CELA3BP08861 270 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 OSMP13725 252 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 C5AR1P21730 350 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 NKX3-2P78367 333 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 MRPS9P82933 396 aaKnown RBP7.86□□□□□ -1.15
VPS50-212ENST00000476413 ROM1Q03395 351 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 ADCY2Q08462 1091 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 EFCAB2Q5VUJ9 269 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 TIGD7Q6NT04 549 aaPredicted RBP7.86□□□□□ -1.15
VPS50-212ENST00000476413 TMC5Q6UXY8 1006 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 CD300LDQ6UXZ3 194 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 EPM2AIP1Q7L775 607 aaPredicted RBP7.86□□□□□ -1.15
VPS50-212ENST00000476413 FERMT2Q96AC1 680 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 HSPBAP1Q96EW2 488 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 RNF38Q9H0F5 515 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 KCTD10Q9H3F6 313 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 KCNG1Q9UIX4 513 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 TUBD1Q9UJT1 453 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 DENND2AQ9ULE3 1009 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 ZBTB21Q9ULJ3 1066 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 NUMBLQ9Y6R0 609 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 CARMIL2Q6F5E8 1435 aa7.86□□□□□ -1.15
VPS50-212ENST00000476413 MYOCOSA0A1B0GUC4 107 aa7.85□□□□□ -1.15
VPS50-212ENST00000476413 IL18BPO95998 194 aa7.85□□□□□ -1.15
VPS50-212ENST00000476413 NCAM1P13591 858 aa7.85□□□□□ -1.15
VPS50-212ENST00000476413 ATF2P15336 505 aa7.85□□□□□ -1.15
VPS50-212ENST00000476413 LPOP22079 712 aaPredicted RBP7.85□□□□□ -1.15
VPS50-212ENST00000476413 NOLC1Q14978 699 aaKnown RBP eCLIP7.85□□□□□ -1.15
VPS50-212ENST00000476413 RTP5Q14D33 572 aa7.85□□□□□ -1.15
VPS50-212ENST00000476413 ACAP2Q15057 778 aa7.85□□□□□ -1.15
VPS50-212ENST00000476413 STILQ15468 1287 aa7.85□□□□□ -1.15
VPS50-212ENST00000476413 SKIDA1Q1XH10 827 aa7.85□□□□□ -1.15
VPS50-212ENST00000476413 MUM1Q2TAK8 710 aa7.85□□□□□ -1.15
VPS50-212ENST00000476413 VASNQ6EMK4 673 aa7.85□□□□□ -1.15
VPS50-212ENST00000476413 ZNF605Q86T29 641 aa7.85□□□□□ -1.15
VPS50-212ENST00000476413 TSPEARQ8WU66 669 aa7.85□□□□□ -1.15
VPS50-212ENST00000476413 SSH1Q8WYL5 1049 aa7.85□□□□□ -1.15
VPS50-212ENST00000476413 LIN37Q96GY3 246 aaPredicted RBP7.85□□□□□ -1.15
VPS50-212ENST00000476413 SLC2A13Q96QE2 648 aa7.85□□□□□ -1.15
VPS50-212ENST00000476413 NUP88Q99567 741 aaPredicted RBP7.85□□□□□ -1.15
VPS50-212ENST00000476413 PITHD1Q9GZP4 211 aaPredicted RBP7.85□□□□□ -1.15
VPS50-212ENST00000476413 CNTD2Q9H8S5 307 aa7.85□□□□□ -1.15
VPS50-212ENST00000476413 NGRNQ9NPE2 291 aaKnown RBP7.85□□□□□ -1.15
VPS50-212ENST00000476413 ANLNQ9NQW6 1124 aa7.85□□□□□ -1.15
VPS50-212ENST00000476413 MBD1Q9UIS9 605 aaPredicted RBP7.85□□□□□ -1.15
VPS50-212ENST00000476413 PCDHA5Q9Y5H7 936 aa7.85□□□□□ -1.15
VPS50-212ENST00000476413 MAP4K4O95819 1239 aaPredicted RBP7.84□□□□□ -1.15
VPS50-212ENST00000476413 IGFBP6P24592 240 aaPredicted RBP7.84□□□□□ -1.15
VPS50-212ENST00000476413 ECE1P42892 770 aa7.84□□□□□ -1.15
VPS50-212ENST00000476413 KANK2Q63ZY3 851 aa7.84□□□□□ -1.15
VPS50-212ENST00000476413 OLFML2BQ68BL8 750 aa7.84□□□□□ -1.15
VPS50-212ENST00000476413 ZC3H18Q86VM9 953 aaKnown RBP7.84□□□□□ -1.15
VPS50-212ENST00000476413 LDHDQ86WU2 507 aa7.84□□□□□ -1.15
VPS50-212ENST00000476413 RAX2Q96IS3 184 aa7.84□□□□□ -1.15
VPS50-212ENST00000476413 DLL4Q9NR61 685 aa7.84□□□□□ -1.15
VPS50-212ENST00000476413 MYPNQ86TC9 1320 aa7.83□□□□□ -1.16
VPS50-212ENST00000476413 CT47B1P0C2W7 299 aaPredicted RBP7.83□□□□□ -1.16
VPS50-212ENST00000476413 CDR1P51861 262 aa7.83□□□□□ -1.16
VPS50-212ENST00000476413 NCKAP1LP55160 1127 aa7.83□□□□□ -1.16
VPS50-212ENST00000476413 LGALS4P56470 323 aa7.83□□□□□ -1.16
VPS50-212ENST00000476413 IL13RA1P78552 427 aa7.83□□□□□ -1.16
VPS50-212ENST00000476413 SRSF3P84103 164 aaKnown RBP7.83□□□□□ -1.16
VPS50-212ENST00000476413 ADAM9Q13443 819 aa7.83□□□□□ -1.16
VPS50-212ENST00000476413 PHF19Q5T6S3 580 aa7.83□□□□□ -1.16
VPS50-212ENST00000476413 CCDC146Q8IYE0 955 aa7.83□□□□□ -1.16
VPS50-212ENST00000476413 AUTS2Q8WXX7 1259 aa7.83□□□□□ -1.16
VPS50-212ENST00000476413 AIFM3Q96NN9 605 aa7.83□□□□□ -1.16
VPS50-212ENST00000476413 BTBD2Q9BX70 525 aa7.83□□□□□ -1.16
VPS50-212ENST00000476413 OR10A5Q9H207 317 aa7.83□□□□□ -1.16
VPS50-212ENST00000476413 MTG2Q9H4K7 406 aa7.83□□□□□ -1.16
VPS50-212ENST00000476413 KCNK12Q9HB15 430 aa7.83□□□□□ -1.16
VPS50-212ENST00000476413 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.83□□□□□ -1.16
VPS50-212ENST00000476413 DPP7Q9UHL4 492 aa7.83□□□□□ -1.16
VPS50-212ENST00000476413 PRSS50Q9UI38 385 aa7.83□□□□□ -1.16
VPS50-212ENST00000476413 SERPINB13Q9UIV8 391 aa7.83□□□□□ -1.16
VPS50-212ENST00000476413 BIN1O00499 593 aa7.82□□□□□ -1.16
VPS50-212ENST00000476413 OPHN1O60890 802 aa7.82□□□□□ -1.16
VPS50-212ENST00000476413 MAFO75444 373 aaPredicted RBP7.82□□□□□ -1.16
VPS50-212ENST00000476413 IL33O95760 270 aa7.82□□□□□ -1.16
VPS50-212ENST00000476413 CYP2C19P33261 490 aa7.82□□□□□ -1.16
VPS50-212ENST00000476413 ITGA1P56199 1179 aa7.82□□□□□ -1.16
VPS50-212ENST00000476413 RRP12Q5JTH9 1297 aaKnown RBP7.82□□□□□ -1.16
VPS50-212ENST00000476413 XP32Q5T750 250 aa7.82□□□□□ -1.16
VPS50-212ENST00000476413 B3GNT8Q7Z7M8 397 aa7.82□□□□□ -1.16
VPS50-212ENST00000476413 SMARCC2Q8TAQ2 1214 aa7.82□□□□□ -1.16
VPS50-212ENST00000476413 CALML6Q8TD86 181 aa7.82□□□□□ -1.16
VPS50-212ENST00000476413 FAM168AQ92567 244 aa7.82□□□□□ -1.16
VPS50-212ENST00000476413 DDX11Q96FC9 970 aa7.82□□□□□ -1.16
VPS50-212ENST00000476413 GORASP1Q9BQQ3 440 aa7.82□□□□□ -1.16
VPS50-212ENST00000476413 MCOLN1Q9GZU1 580 aa7.82□□□□□ -1.16
VPS50-212ENST00000476413 HAPLN2Q9GZV7 340 aa7.82□□□□□ -1.16
VPS50-212ENST00000476413 SLC12A5Q9H2X9 1139 aa7.82□□□□□ -1.16
VPS50-212ENST00000476413 A0A0A6YYJ9 748 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 ST20-MTHFSA0A0A6YYL1 179 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 PEX10O60683 326 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 NDUFS2O75306 463 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 PCDH8O95206 1070 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 CYP2C8P10632 490 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms