RNA–Protein interactions for RNA: ENST00000467853.5

PSMD6-204, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best)

Gene PSMD6, Length 4,583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-204ENST00000467853 ELF1P32519 619 aa6.89□□□□□ -1.31
PSMD6-204ENST00000467853 PSMC2P35998 433 aaKnown RBP6.89□□□□□ -1.31
PSMD6-204ENST00000467853 PMS2P54278 862 aa6.89□□□□□ -1.31
PSMD6-204ENST00000467853 CETN1Q12798 172 aa6.89□□□□□ -1.31
PSMD6-204ENST00000467853 KCNK18Q7Z418 384 aa6.89□□□□□ -1.31
PSMD6-204ENST00000467853 NT5DC3Q86UY8 548 aa6.89□□□□□ -1.31
PSMD6-204ENST00000467853 CEP57Q86XR8 500 aa6.89□□□□□ -1.31
PSMD6-204ENST00000467853 TLCD1Q96CP7 247 aa6.89□□□□□ -1.31
PSMD6-204ENST00000467853 IFT74Q96LB3 600 aa6.89□□□□□ -1.31
PSMD6-204ENST00000467853 ERP44Q9BS26 406 aa6.89□□□□□ -1.31
PSMD6-204ENST00000467853 PLVAPQ9BX97 442 aa6.89□□□□□ -1.31
PSMD6-204ENST00000467853 GPCPD1Q9NPB8 672 aa6.89□□□□□ -1.31
PSMD6-204ENST00000467853 HOMER3Q9NSC5 361 aa6.89□□□□□ -1.31
PSMD6-204ENST00000467853 AMACRQ9UHK6 382 aa6.89□□□□□ -1.31
PSMD6-204ENST00000467853 SNED1Q8TER0 1413 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 XIRP1Q702N8 1843 aaKnown RBP6.88□□□□□ -1.31
PSMD6-204ENST00000467853 FRMPD2Q68DX3 1309 aaPredicted RBP6.88□□□□□ -1.31
PSMD6-204ENST00000467853 FGGP02679 453 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 NR3C1P04150 777 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 SNHG28P0DPA3 235 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 ERCC3P19447 782 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 CLK2P49760 499 aaKnown RBP6.88□□□□□ -1.31
PSMD6-204ENST00000467853 ZNF543Q08ER8 600 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 UAP1Q16222 522 aaPredicted RBP6.88□□□□□ -1.31
PSMD6-204ENST00000467853 BMT2Q1RMZ1 405 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 ERMARDQ5T6L9 678 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 SEL1L2Q5TEA6 688 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 GPIHBP1Q8IV16 184 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 TEX2Q8IWB9 1127 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 CCDC63Q8NA47 563 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 SCLT1Q96NL6 688 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 SELENOSQ9BQE4 189 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 STK33Q9BYT3 514 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 PABPC3Q9H361 631 aaKnown RBP6.88□□□□□ -1.31
PSMD6-204ENST00000467853 CPVLQ9H3G5 476 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 GCNT4Q9P109 453 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 MCM8Q9UJA3 840 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 PCDHB8Q9UN66 801 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 PCDHB13Q9Y5F0 798 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 CYP3A7-CYP3A51PA0A087WV96 503 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 EIF3DO15371 548 aaKnown RBP eCLIP6.88□□□□□ -1.31
PSMD6-204ENST00000467853 TTI1O43156 1089 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 CYP3A7P24462 503 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 ECHS1P30084 290 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 SOX5P35711 763 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 PRPF4BQ13523 1007 aaKnown RBP6.88□□□□□ -1.31
PSMD6-204ENST00000467853 EPHA7Q15375 998 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 DIXDC1Q155Q3 683 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 NFIL3Q16649 462 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 TBC1D9BQ66K14 1250 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 FAM20AQ96MK3 541 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 NUDT12Q9BQG2 462 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 TMEM109Q9BVC6 243 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 MOV10L1Q9BXT6 1211 aaKnown RBP6.88□□□□□ -1.31
PSMD6-204ENST00000467853 ROPN1BQ9BZX4 212 aaPredicted RBP6.88□□□□□ -1.31
PSMD6-204ENST00000467853 DPH5Q9H2P9 285 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 ROPN1Q9HAT0 212 aaPredicted RBP6.88□□□□□ -1.31
PSMD6-204ENST00000467853 ATP6V0A4Q9HBG4 840 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 INTS9Q9NV88 658 aaKnown RBP6.88□□□□□ -1.31
PSMD6-204ENST00000467853 ATP8A1Q9Y2Q0 1164 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 HLA-DOAP06340 250 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 SLC9A1P19634 815 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 DRD4P21917 467 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 GBP2P32456 591 aaPredicted RBP6.88□□□□□ -1.31
PSMD6-204ENST00000467853 CRELD2Q6UXH1 353 aaPredicted RBP6.88□□□□□ -1.31
PSMD6-204ENST00000467853 HS2ST1Q7LGA3 356 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 SYT2Q8N9I0 419 aaPredicted RBP6.88□□□□□ -1.31
PSMD6-204ENST00000467853 HAS1Q92839 578 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 JAG2Q9Y219 1238 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 ZNF831Q5JPB2 1677 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 NKRFO15226 690 aaKnown RBP eCLIP6.88□□□□□ -1.31
PSMD6-204ENST00000467853 RPS6KA4O75676 772 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 MMEP08473 750 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 JAM2P57087 298 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 KIAA1755Q5JYT7 1200 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 CEP128Q6ZU80 1094 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 ADGRF4Q8IZF3 695 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 OR2W6PQ8NHA6 318 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 CCDC17Q96LX7 622 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 JMJD4Q9H9V9 463 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 BATF3Q9NR55 127 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 FRMD4BQ9Y2L6 1034 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 CEP83Q9Y592 693 aa6.88□□□□□ -1.31
PSMD6-204ENST00000467853 POTEB3A0JP26 581 aa6.87□□□□□ -1.31
PSMD6-204ENST00000467853 ANKRD62A6NC57 917 aa6.87□□□□□ -1.31
PSMD6-204ENST00000467853 POTECB2RU33 542 aa6.87□□□□□ -1.31
PSMD6-204ENST00000467853 FAM13AO94988 1023 aa6.87□□□□□ -1.31
PSMD6-204ENST00000467853 BCRP11274 1271 aa6.87□□□□□ -1.31
PSMD6-204ENST00000467853 RPA1P27694 616 aa6.87□□□□□ -1.31
PSMD6-204ENST00000467853 TMOD1P28289 359 aa6.87□□□□□ -1.31
PSMD6-204ENST00000467853 PDE6CP51160 858 aa6.87□□□□□ -1.31
PSMD6-204ENST00000467853 GALCP54803 685 aa6.87□□□□□ -1.31
PSMD6-204ENST00000467853 SLC12A3P55017 1021 aa6.87□□□□□ -1.31
PSMD6-204ENST00000467853 RIPK1Q13546 671 aa6.87□□□□□ -1.31
PSMD6-204ENST00000467853 CRYMQ14894 314 aa6.87□□□□□ -1.31
PSMD6-204ENST00000467853 POTEBQ6S5H4 581 aa6.87□□□□□ -1.31
PSMD6-204ENST00000467853 DDX42Q86XP3 938 aaKnown RBP eCLIP6.87□□□□□ -1.31
PSMD6-204ENST00000467853 DYDC1Q8WWB3 177 aa6.87□□□□□ -1.31
PSMD6-204ENST00000467853 CCDC134Q9H6E4 229 aa6.87□□□□□ -1.31
PSMD6-204ENST00000467853 CD248Q9HCU0 757 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms