RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 VTNP04004 478 aa21.36■■□□□ 1.01
SRSF4-202ENST00000466448 MRE11P49959 708 aa21.36■■□□□ 1.01
SRSF4-202ENST00000466448 ERVFC1P60507 584 aa21.36■■□□□ 1.01
SRSF4-202ENST00000466448 FAM189BP81408 668 aa21.36■■□□□ 1.01
SRSF4-202ENST00000466448 ZNF746Q6NUN9 644 aaPredicted RBP21.36■■□□□ 1.01
SRSF4-202ENST00000466448 THNSL1Q8IYQ7 743 aa21.36■■□□□ 1.01
SRSF4-202ENST00000466448 METTL13Q8N6R0 699 aa21.36■■□□□ 1.01
SRSF4-202ENST00000466448 COLGALT1Q8NBJ5 622 aa21.36■■□□□ 1.01
SRSF4-202ENST00000466448 ATP6V0A4Q9HBG4 840 aa21.36■■□□□ 1.01
SRSF4-202ENST00000466448 TBC1D22BQ9NU19 505 aa21.36■■□□□ 1.01
SRSF4-202ENST00000466448 TMEM161AQ9NX61 479 aa21.36■■□□□ 1.01
SRSF4-202ENST00000466448 NAP1L2Q9ULW6 460 aaPredicted RBP21.36■■□□□ 1.01
SRSF4-202ENST00000466448 ESYT2A0FGR8 921 aa21.35■■□□□ 1.01
SRSF4-202ENST00000466448 METAP2P50579 478 aaKnown RBP eCLIP21.35■■□□□ 1.01
SRSF4-202ENST00000466448 SETQ01105 290 aaPredicted RBP21.35■■□□□ 1.01
SRSF4-202ENST00000466448 DSC3Q14574 896 aa21.35■■□□□ 1.01
SRSF4-202ENST00000466448 CBX2Q14781 532 aaPredicted RBP21.35■■□□□ 1.01
SRSF4-202ENST00000466448 SMAP1Q8IYB5 467 aaPredicted RBP21.35■■□□□ 1.01
SRSF4-202ENST00000466448 REXO1Q8N1G1 1221 aaKnown RBP21.35■■□□□ 1.01
SRSF4-202ENST00000466448 ZMYND12Q9H0C1 365 aa21.35■■□□□ 1.01
SRSF4-202ENST00000466448 CWH43Q9H720 699 aa21.35■■□□□ 1.01
SRSF4-202ENST00000466448 FSCN2O14926 492 aa21.34■■□□□ 1.01
SRSF4-202ENST00000466448 KRT32Q14532 448 aa21.34■■□□□ 1.01
SRSF4-202ENST00000466448 DUSP6Q16828 381 aa21.34■■□□□ 1.01
SRSF4-202ENST00000466448 TRIM67Q6ZTA4 783 aa21.34■■□□□ 1.01
SRSF4-202ENST00000466448 PHF7Q9BWX1 381 aaPredicted RBP21.34■■□□□ 1.01
SRSF4-202ENST00000466448 ELAC1Q9H777 363 aaKnown RBP21.34■■□□□ 1.01
SRSF4-202ENST00000466448 C6orf50Q9HD87 102 aa21.34■■□□□ 1.01
SRSF4-202ENST00000466448 GABBR1Q9UBS5 961 aa21.34■■□□□ 1.01
SRSF4-202ENST00000466448 PCDHA10Q9Y5I2 948 aa21.34■■□□□ 1.01
SRSF4-202ENST00000466448 PLXNA4Q9HCM2 1894 aa21.34■■□□□ 1.01
SRSF4-202ENST00000466448 PSAPP07602 524 aa21.33■■□□□ 1.01
SRSF4-202ENST00000466448 HMGB1P09429 215 aaKnown RBP21.33■■□□□ 1.01
SRSF4-202ENST00000466448 CPA1P15085 419 aa21.33■■□□□ 1.01
SRSF4-202ENST00000466448 LAG3P18627 525 aa21.33■■□□□ 1.01
SRSF4-202ENST00000466448 CLCN3P51790 818 aa21.33■■□□□ 1.01
SRSF4-202ENST00000466448 APOBRQ0VD83 1088 aa21.33■■□□□ 1.01
SRSF4-202ENST00000466448 PKN1Q16512 942 aa21.33■■□□□ 1.01
SRSF4-202ENST00000466448 PRR16Q569H4 304 aa21.33■■□□□ 1.01
SRSF4-202ENST00000466448 MCTP2Q6DN12 878 aa21.33■■□□□ 1.01
SRSF4-202ENST00000466448 CDCA3Q99618 268 aaPredicted RBP21.33■■□□□ 1.01
SRSF4-202ENST00000466448 CCDC196A0A1B0GTZ2 297 aa21.32■■□□□ 1
SRSF4-202ENST00000466448 FSD2A1L4K1 749 aa21.32■■□□□ 1
SRSF4-202ENST00000466448 TMEM221A6NGB7 291 aa21.32■■□□□ 1
SRSF4-202ENST00000466448 M0R296 226 aa21.32■■□□□ 1
SRSF4-202ENST00000466448 FGD1P98174 961 aa21.32■■□□□ 1
SRSF4-202ENST00000466448 PDE12Q6L8Q7 609 aaKnown RBP21.32■■□□□ 1
SRSF4-202ENST00000466448 LRRC55Q6ZSA7 311 aa21.32■■□□□ 1
SRSF4-202ENST00000466448 BMP8AQ7Z5Y6 402 aa21.32■■□□□ 1
SRSF4-202ENST00000466448 LINC01465Q8N7H1 131 aa21.32■■□□□ 1
SRSF4-202ENST00000466448 CCDC12Q8WUD4 166 aaPredicted RBP21.32■■□□□ 1
SRSF4-202ENST00000466448 SUSD6Q92537 303 aa21.32■■□□□ 1
SRSF4-202ENST00000466448 RPGRIP1Q96KN7 1286 aa21.32■■□□□ 1
SRSF4-202ENST00000466448 TMEM117Q9H0C3 514 aa21.32■■□□□ 1
SRSF4-202ENST00000466448 ADAMTS10Q9H324 1103 aa21.32■■□□□ 1
SRSF4-202ENST00000466448 TCEAL9Q9UHQ7 104 aa21.32■■□□□ 1
SRSF4-202ENST00000466448 CEP131Q9UPN4 1083 aa21.32■■□□□ 1
SRSF4-202ENST00000466448 LZTS1Q9Y250 596 aa21.32■■□□□ 1
SRSF4-202ENST00000466448 LOXHD1Q8IVV2 1947 aa21.31■■□□□ 1
SRSF4-202ENST00000466448 ATF7P17544 494 aaPredicted RBP21.31■■□□□ 1
SRSF4-202ENST00000466448 NLRP11P59045 1033 aaKnown RBP21.31■■□□□ 1
SRSF4-202ENST00000466448 ZXDAP98168 799 aa21.31■■□□□ 1
SRSF4-202ENST00000466448 PLCB3Q01970 1234 aa21.31■■□□□ 1
SRSF4-202ENST00000466448 KCNC3Q14003 757 aa21.31■■□□□ 1
SRSF4-202ENST00000466448 PLPP4Q5VZY2 271 aa21.31■■□□□ 1
SRSF4-202ENST00000466448 LRRC71Q8N4P6 559 aa21.31■■□□□ 1
SRSF4-202ENST00000466448 RASGRP4Q8TDF6 673 aa21.31■■□□□ 1
SRSF4-202ENST00000466448 MRPS27Q92552 414 aaKnown RBP21.31■■□□□ 1
SRSF4-202ENST00000466448 LENG9Q96B70 501 aa21.31■■□□□ 1
SRSF4-202ENST00000466448 CASD1Q96PB1 797 aa21.31■■□□□ 1
SRSF4-202ENST00000466448 RNF19AQ9NV58 838 aa21.31■■□□□ 1
SRSF4-202ENST00000466448 AKT3Q9Y243 479 aa21.31■■□□□ 1
SRSF4-202ENST00000466448 SAMM50Q9Y512 469 aa21.31■■□□□ 1
SRSF4-202ENST00000466448 MAGEB2O15479 319 aa21.3■■□□□ 1
SRSF4-202ENST00000466448 PRPF3O43395 683 aaKnown RBP21.3■■□□□ 1
SRSF4-202ENST00000466448 GNA11P29992 359 aa21.3■■□□□ 1
SRSF4-202ENST00000466448 CIITAP33076 1130 aa21.3■■□□□ 1
SRSF4-202ENST00000466448 PBX3P40426 434 aa21.3■■□□□ 1
SRSF4-202ENST00000466448 EFCAB12Q6NXP0 572 aa21.3■■□□□ 1
SRSF4-202ENST00000466448 Q6ZUG5 572 aa21.3■■□□□ 1
SRSF4-202ENST00000466448 BRF1Q92994 677 aa21.3■■□□□ 1
SRSF4-202ENST00000466448 PHKBQ93100 1093 aa21.3■■□□□ 1
SRSF4-202ENST00000466448 PBXIP1Q96AQ6 731 aa21.3■■□□□ 1
SRSF4-202ENST00000466448 FAM167AQ96KS9 214 aa21.3■■□□□ 1
SRSF4-202ENST00000466448 MAP7D2Q96T17 732 aa21.3■■□□□ 1
SRSF4-202ENST00000466448 TCF25Q9BQ70 676 aa21.3■■□□□ 1
SRSF4-202ENST00000466448 NID2Q14112 1375 aa21.3■■□□□ 1
SRSF4-202ENST00000466448 FNDC1Q4ZHG4 1894 aaPredicted RBP21.29■■□□□ 1
SRSF4-202ENST00000466448 HIDE1A8MVS5 230 aa21.29■■□□□ 1
SRSF4-202ENST00000466448 WDR64B1ANS9 1081 aa21.29■■□□□ 1
SRSF4-202ENST00000466448 HOXA2O43364 376 aa21.29■■□□□ 1
SRSF4-202ENST00000466448 ZNF862O60290 1169 aa21.29■■□□□ 1
SRSF4-202ENST00000466448 CDC45O75419 566 aa21.29■■□□□ 1
SRSF4-202ENST00000466448 EIF4BP23588 611 aaKnown RBP21.29■■□□□ 1
SRSF4-202ENST00000466448 KCNT2Q6UVM3 1135 aa21.29■■□□□ 1
SRSF4-202ENST00000466448 TMEM184AQ6ZMB5 413 aa21.29■■□□□ 1
SRSF4-202ENST00000466448 LRRC43Q8N309 656 aa21.29■■□□□ 1
SRSF4-202ENST00000466448 PRSS33Q8NF86 280 aa21.29■■□□□ 1
SRSF4-202ENST00000466448 ZNF668Q96K58 619 aaPredicted RBP21.29■■□□□ 1
SRSF4-202ENST00000466448 S1PR5Q9H228 398 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms