RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 DONSONQ9NYP3 566 aa8.6□□□□□ -1.03
BRCC3-208ENST00000453705 PCDHGB6Q9Y5F9 930 aa8.6□□□□□ -1.03
BRCC3-208ENST00000453705 GPAA1O43292 621 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 PPFIA2O75334 1257 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 TBX18O95935 607 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 NPR3P17342 541 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 SSRP1Q08945 709 aaKnown RBP8.59□□□□□ -1.03
BRCC3-208ENST00000453705 PRPF4BQ13523 1007 aaKnown RBP8.59□□□□□ -1.03
BRCC3-208ENST00000453705 RASGRF1Q13972 1273 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 SETMARQ53H47 684 aaPredicted RBP8.59□□□□□ -1.03
BRCC3-208ENST00000453705 FAM205BPQ63HN1 556 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 PDE12Q6L8Q7 609 aaKnown RBP8.59□□□□□ -1.03
BRCC3-208ENST00000453705 COLGALT2Q8IYK4 626 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 TBC1D21Q8IYX1 336 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 ZNF540Q8NDQ6 660 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 RIN3Q8TB24 985 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 BRSK1Q8TDC3 778 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 CNDP1Q96KN2 507 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 NLRP3Q96P20 1036 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 SEC62Q99442 399 aaKnown RBP8.59□□□□□ -1.03
BRCC3-208ENST00000453705 C7orf25Q9BPX7 421 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 TOPORSQ9NS56 1045 aaPredicted RBP8.59□□□□□ -1.03
BRCC3-208ENST00000453705 MINPP1Q9UNW1 487 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 A0A1B0GVC2 190 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 APBB3O95704 486 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 SYT1P21579 422 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 TUBP50607 506 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 USP14P54578 494 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 RAC1P63000 192 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 KIF4BQ2VIQ3 1234 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 MMEL1Q495T6 779 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 AP1ARQ63HQ0 302 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 MTHFD1LQ6UB35 978 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 CCDC149Q6ZUS6 474 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 UTP15Q8TED0 518 aaKnown RBP8.59□□□□□ -1.03
BRCC3-208ENST00000453705 SEC31BQ9NQW1 1179 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 RASSF1Q9NS23 344 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 SRP68Q9UHB9 627 aaKnown RBP8.59□□□□□ -1.03
BRCC3-208ENST00000453705 KIF3AQ9Y496 699 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 TTLL3Q9Y4R7 772 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 GREB1LQ9C091 1923 aaPredicted RBP8.59□□□□□ -1.03
BRCC3-208ENST00000453705 MYH2Q9UKX2 1941 aa8.59□□□□□ -1.03
BRCC3-208ENST00000453705 UQCRHLA0A096LP55 91 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 C9IYK1 514 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 RFPL1O75677 317 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 DGKIO75912 1065 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 MICAL2O94851 1124 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 GNRH1P01148 92 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 UQCRHP07919 91 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 KRT13P13646 458 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 WEE1P30291 646 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 BAG6P46379 1132 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 NPTX2P47972 431 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 PKP1Q13835 747 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 STAT4Q14765 748 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 HECTD3Q5T447 861 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 SGMS1Q86VZ5 419 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 CLMNQ96JQ2 1002 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 NOL10Q9BSC4 688 aaKnown RBP8.58□□□□□ -1.04
BRCC3-208ENST00000453705 ARPC4-TTLL3A0A0A6YYG9 625 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 FAM153BP0C7A2 387 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 GJB2P29033 226 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 MCM5P33992 734 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 IARSP41252 1262 aaKnown RBP8.58□□□□□ -1.04
BRCC3-208ENST00000453705 CRKP46108 304 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 GRAPQ13588 217 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 TRAF7Q6Q0C0 670 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 PACS1Q6VY07 963 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 ARHGEF18Q6ZSZ5 1173 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 MAP4K3Q8IVH8 894 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 GRAPLQ8TC17 118 aaPredicted RBP8.58□□□□□ -1.04
BRCC3-208ENST00000453705 SLC7A3Q8WY07 619 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 CLIP3Q96DZ5 547 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 DMRTB1Q96MA1 342 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 BRIP1Q9BX63 1249 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 PUS7LQ9H0K6 701 aaKnown RBP8.58□□□□□ -1.04
BRCC3-208ENST00000453705 LUC7LQ9NQ29 371 aaKnown RBP8.58□□□□□ -1.04
BRCC3-208ENST00000453705 HPS4Q9NQG7 708 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 ITM2CQ9NQX7 267 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 WDR35Q9P2L0 1181 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 TAF6LQ9Y6J9 622 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 EP400Q96L91 3159 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 ROBO3Q96MS0 1386 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 BAZ2AQ9UIF9 1905 aaKnown RBP8.58□□□□□ -1.04
BRCC3-208ENST00000453705 ZNF532Q9HCE3 1301 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 STK36Q9NRP7 1315 aa8.58□□□□□ -1.04
BRCC3-208ENST00000453705 A6NHS1 94 aa8.57□□□□□ -1.04
BRCC3-208ENST00000453705 STAM2O75886 525 aa8.57□□□□□ -1.04
BRCC3-208ENST00000453705 CENPAP49450 140 aa8.57□□□□□ -1.04
BRCC3-208ENST00000453705 YARSP54577 528 aaKnown RBP8.57□□□□□ -1.04
BRCC3-208ENST00000453705 SESN3P58005 492 aa8.57□□□□□ -1.04
BRCC3-208ENST00000453705 RPS8P62241 208 aaKnown RBP8.57□□□□□ -1.04
BRCC3-208ENST00000453705 SKOR1P84550 965 aa8.57□□□□□ -1.04
BRCC3-208ENST00000453705 Q6ZUG5 572 aa8.57□□□□□ -1.04
BRCC3-208ENST00000453705 TMEM110Q86TL2 294 aa8.57□□□□□ -1.04
BRCC3-208ENST00000453705 NCOA7Q8NI08 942 aa8.57□□□□□ -1.04
BRCC3-208ENST00000453705 DDX11Q96FC9 970 aa8.57□□□□□ -1.04
BRCC3-208ENST00000453705 CAMKK2Q96RR4 588 aa8.57□□□□□ -1.04
BRCC3-208ENST00000453705 CRAMP1Q96RY5 1269 aa8.57□□□□□ -1.04
BRCC3-208ENST00000453705 IQCGQ9H095 443 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms