RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 MRPS15P82914 257 aaKnown RBP17.22■□□□□ 0.35
ITSN1-209ENST00000399352 CAPRIN1Q14444 709 aaKnown RBP17.22■□□□□ 0.35
ITSN1-209ENST00000399352 CCDC85BQ15834 202 aaPredicted RBP17.22■□□□□ 0.35
ITSN1-209ENST00000399352 RASSF3Q86WH2 238 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 CATSPER3Q86XQ3 398 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 ALKBH8Q96BT7 664 aaKnown RBP17.22■□□□□ 0.35
ITSN1-209ENST00000399352 BHMT2Q9H2M3 363 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.22■□□□□ 0.35
ITSN1-209ENST00000399352 PRR29P0C7W0 189 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 PRCPP42785 496 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 SMAD1Q15797 465 aaKnown RBP17.22■□□□□ 0.35
ITSN1-209ENST00000399352 FMR1NBQ8N0W7 255 aaPredicted RBP17.22■□□□□ 0.35
ITSN1-209ENST00000399352 HEXIM2Q96MH2 286 aaKnown RBP17.22■□□□□ 0.35
ITSN1-209ENST00000399352 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.22■□□□□ 0.35
ITSN1-209ENST00000399352 TTC26A0AVF1 554 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 SEC24DO94855 1032 aaPredicted RBP17.22■□□□□ 0.35
ITSN1-209ENST00000399352 LRRC36Q1X8D7 754 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 KLHL38Q2WGJ6 581 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 SLC30A9Q6PML9 568 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 NCAPG2Q86XI2 1143 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 ZNF473Q8WTR7 871 aaKnown RBP17.22■□□□□ 0.35
ITSN1-209ENST00000399352 RNF25Q96BH1 459 aaPredicted RBP17.22■□□□□ 0.35
ITSN1-209ENST00000399352 IRX2Q9BZI1 471 aaPredicted RBP17.22■□□□□ 0.35
ITSN1-209ENST00000399352 SLC13A1Q9BZW2 595 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 LRRC4Q9HBW1 653 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 ALG13Q9NP73 1137 aaKnown RBP17.22■□□□□ 0.35
ITSN1-209ENST00000399352 GPR108Q9NPR9 543 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 ADAM22Q9P0K1 906 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 LPXNO60711 386 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 COPS2P61201 443 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 SKOR1P84550 965 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 CTTNQ14247 550 aaKnown RBP17.22■□□□□ 0.35
ITSN1-209ENST00000399352 ZNF394Q53GI3 561 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 DHX40Q8IX18 779 aaKnown RBP17.22■□□□□ 0.35
ITSN1-209ENST00000399352 RPS6KC1Q96S38 1066 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 ZBTB18Q99592 522 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 AKT3Q9Y243 479 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 HLA-DPA1P20036 260 aa17.22■□□□□ 0.35
ITSN1-209ENST00000399352 FAM193BQ96PV7 902 aaPredicted RBP17.22■□□□□ 0.35
ITSN1-209ENST00000399352 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.22■□□□□ 0.352e-6■□□□□ 8.2
ITSN1-209ENST00000399352 PLEKHA8P1O95397 391 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 KCNA4P22459 653 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 TEDDM1Q5T9Z0 273 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 ARL6IP4Q66PJ3 421 aaKnown RBP17.21■□□□□ 0.35
ITSN1-209ENST00000399352 PASD1Q8IV76 773 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 KIF9Q9HAQ2 790 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 KPNA7A9QM74 516 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 TCP11X1B4DZS4 312 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 TTLL1O95922 423 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 XPAP23025 273 aaPredicted RBP17.21■□□□□ 0.35
ITSN1-209ENST00000399352 TRPC1P48995 793 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 TOB2Q14106 344 aaPredicted RBP17.21■□□□□ 0.35
ITSN1-209ENST00000399352 PPP4R3CPQ6ZMV5 832 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 LONP2Q86WA8 852 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 PLEKHF1Q96S99 279 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 PRMT1Q99873 361 aaKnown RBP17.21■□□□□ 0.35
ITSN1-209ENST00000399352 PGM1P36871 562 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 GPC5P78333 572 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 ARL8AQ96BM9 186 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 TTC25Q96NG3 672 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 BPIFA3Q9BQP9 254 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 LRRC1Q9BTT6 524 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 AS3MTQ9HBK9 375 aa17.21■□□□□ 0.35
ITSN1-209ENST00000399352 NOC2LQ9Y3T9 749 aaKnown RBP17.21■□□□□ 0.35
ITSN1-209ENST00000399352 CIAO1O76071 339 aa17.21■□□□□ 0.34
ITSN1-209ENST00000399352 CCDC159P0C7I6 412 aa17.21■□□□□ 0.34
ITSN1-209ENST00000399352 IRX1P78414 480 aaPredicted RBP17.21■□□□□ 0.34
ITSN1-209ENST00000399352 TEKT2Q9UIF3 430 aa17.21■□□□□ 0.34
ITSN1-209ENST00000399352 TRIM33Q9UPN9 1127 aa17.21■□□□□ 0.34
ITSN1-209ENST00000399352 MDH1P40925 334 aaKnown RBP17.2■□□□□ 0.34
ITSN1-209ENST00000399352 SPATA21Q7Z572 469 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 ZBED8Q8IZ13 594 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.2■□□□□ 0.342e-7■■■■■ 62.8
ITSN1-209ENST00000399352 CPSF3Q9UKF6 684 aaKnown RBP17.2■□□□□ 0.34
ITSN1-209ENST00000399352 HEY1Q9Y5J3 304 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 FGFR4P22455 802 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 SPATA4Q8NEY3 305 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 USP6NLQ92738 828 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 THAP11Q96EK4 314 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 RBM41Q96IZ5 413 aaKnown RBP17.2■□□□□ 0.34
ITSN1-209ENST00000399352 CCT8L2Q96SF2 557 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 EPN3Q9H201 632 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 FAM96AQ9H5X1 160 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 PZPP20742 1482 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 F5H423 210 aaPredicted RBP17.2■□□□□ 0.34
ITSN1-209ENST00000399352 KRT4P19013 534 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 HDAC4P56524 1084 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 CAV1Q03135 178 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 NSUN2Q08J23 767 aaKnown RBP eCLIP17.2■□□□□ 0.34
ITSN1-209ENST00000399352 PDIA2Q13087 525 aaKnown RBP17.2■□□□□ 0.34
ITSN1-209ENST00000399352 MTERF2Q49AM1 385 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 MDH1BQ5I0G3 518 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 RARS2Q5T160 578 aaKnown RBP17.2■□□□□ 0.34
ITSN1-209ENST00000399352 AGR3Q8TD06 166 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 RIN2Q8WYP3 895 aaPredicted RBP17.2■□□□□ 0.34
ITSN1-209ENST00000399352 SLC13A4Q9UKG4 626 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 MYOM2P54296 1465 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 CUL3Q13618 768 aa17.2■□□□□ 0.34
ITSN1-209ENST00000399352 ZC3H12BQ5HYM0 836 aaKnown RBP17.2■□□□□ 0.34
ITSN1-209ENST00000399352 DHX38Q92620 1227 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms