RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 HSP90AA1P07900 732 aaKnown RBP9.4□□□□□ -0.9
BRCC3-205ENST00000399026 OR52Z1P0C646 297 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 ACRP10323 421 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 INSRRP14616 1297 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 CSF2RAP15509 400 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 ATP4AP20648 1035 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 SYT1P21579 422 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 SFNP31947 248 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 TXKP42681 527 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 TOB1P50616 345 aaPredicted RBP9.4□□□□□ -0.9
BRCC3-205ENST00000399026 CYP4A11Q02928 519 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 FPGSQ05932 587 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 SPIRE1Q08AE8 756 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 PPP2R5CQ13362 524 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 TRIM71Q2Q1W2 868 aaKnown RBP9.4□□□□□ -0.9
BRCC3-205ENST00000399026 B3GNT9Q6UX72 402 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 PLPPR4Q7Z2D5 763 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 SERINC5Q86VE9 423 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 FAM160A2Q8N612 972 aaPredicted RBP9.4□□□□□ -0.9
BRCC3-205ENST00000399026 ATP8B4Q8TF62 1192 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 INTS4Q96HW7 963 aaKnown RBP9.4□□□□□ -0.9
BRCC3-205ENST00000399026 FAM20AQ96MK3 541 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 PRO3102Q9H379 93 aa9.4□□□□□ -0.9
BRCC3-205ENST00000399026 PTPRSQ13332 1948 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 LOXHD1Q8IVV2 1947 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 NRCAMQ92823 1304 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 BAG4O95429 457 aaKnown RBP9.39□□□□□ -0.91
BRCC3-205ENST00000399026 CKBP12277 381 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 THPOP40225 353 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 TRAPPC10P48553 1259 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 PTK7Q13308 1070 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 BFSP2Q13515 415 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 C9orf50Q5SZB4 431 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 MARCH8Q5T0T0 291 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 ZNF618Q5T7W0 954 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 FOXD4L5Q5VV16 416 aaPredicted RBP9.39□□□□□ -0.91
BRCC3-205ENST00000399026 PLA2G4FQ68DD2 849 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 MFSD5Q6N075 450 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 BRICD5Q6PL45 260 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 LRRC8DQ7L1W4 858 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 DEFB128Q7Z7B8 93 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 SLFN12Q8IYM2 578 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 CCDC155Q8N6L0 562 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 CAGE1Q8TC20 777 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 FOXD4L4Q8WXT5 416 aaPredicted RBP9.39□□□□□ -0.91
BRCC3-205ENST00000399026 DYDC2Q96IM9 177 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 MTMR9Q96QG7 549 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 SH2D3AQ9BRG2 576 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 LXNQ9BS40 222 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 FTOQ9C0B1 505 aaKnown RBP eCLIP9.39□□□□□ -0.91
BRCC3-205ENST00000399026 FAM49AQ9H0Q0 323 aaPredicted RBP9.39□□□□□ -0.91
BRCC3-205ENST00000399026 TTC12Q9H892 705 aaPredicted RBP9.39□□□□□ -0.91
BRCC3-205ENST00000399026 WRAP73Q9P2S5 460 aaPredicted RBP9.39□□□□□ -0.91
BRCC3-205ENST00000399026 MAFBQ9Y5Q3 323 aaPredicted RBP9.39□□□□□ -0.91
BRCC3-205ENST00000399026 TRIOBPQ9H2D6 2365 aa9.39□□□□□ -0.91
BRCC3-205ENST00000399026 GBF1Q92538 1859 aa9.38□□□□□ -0.91
BRCC3-205ENST00000399026 ZBTB42B2RXF5 422 aa9.38□□□□□ -0.91
BRCC3-205ENST00000399026 C22orf31O95567 290 aa9.38□□□□□ -0.91
BRCC3-205ENST00000399026 SELPP16109 830 aa9.38□□□□□ -0.91
BRCC3-205ENST00000399026 PDCP20941 246 aa9.38□□□□□ -0.91
BRCC3-205ENST00000399026 ADAM17P78536 824 aa9.38□□□□□ -0.91
BRCC3-205ENST00000399026 TMEM62Q0P6H9 643 aa9.38□□□□□ -0.91
BRCC3-205ENST00000399026 RESTQ13127 1097 aa9.38□□□□□ -0.91
BRCC3-205ENST00000399026 PPIGQ13427 754 aaKnown RBP eCLIP9.38□□□□□ -0.91
BRCC3-205ENST00000399026 CTTNQ14247 550 aaKnown RBP9.38□□□□□ -0.91
BRCC3-205ENST00000399026 FAM173BQ6P4H8 233 aa9.38□□□□□ -0.91
BRCC3-205ENST00000399026 ZNF598Q86UK7 904 aaKnown RBP9.38□□□□□ -0.91
BRCC3-205ENST00000399026 TMEM199Q8N511 208 aa9.38□□□□□ -0.91
BRCC3-205ENST00000399026 RETREG2Q8NC44 543 aa9.38□□□□□ -0.91
BRCC3-205ENST00000399026 RDM1Q8NG50 284 aa9.38□□□□□ -0.91
BRCC3-205ENST00000399026 FAM167AQ96KS9 214 aa9.38□□□□□ -0.91
BRCC3-205ENST00000399026 PPP1R16BQ96T49 567 aa9.38□□□□□ -0.91
BRCC3-205ENST00000399026 RGL1Q9NZL6 768 aa9.38□□□□□ -0.91
BRCC3-205ENST00000399026 MTMR6Q9Y217 621 aa9.38□□□□□ -0.91
BRCC3-205ENST00000399026 COL1A2P08123 1366 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 TET1Q8NFU7 2136 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 MBLAC1A4D2B0 266 aaPredicted RBP9.37□□□□□ -0.91
BRCC3-205ENST00000399026 STX6O43752 255 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 HBP1O60381 514 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 IQCF3P0C7M6 154 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 GNAT1P11488 350 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 TECP42680 631 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 SLC26A2P50443 739 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 CLCN3P51790 818 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 RBL2Q08999 1139 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 ORC2Q13416 577 aaPredicted RBP9.37□□□□□ -0.91
BRCC3-205ENST00000399026 PKP1Q13835 747 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 MBTPS1Q14703 1052 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 EPHA7Q15375 998 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 SHHQ15465 462 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 MTERF2Q49AM1 385 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 RILPL1Q5EBL4 403 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 MTHFD1LQ6UB35 978 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 BRAPQ7Z569 592 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 TDHQ8IZJ6 230 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 LRRC71Q8N4P6 559 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 C4orf32Q8N8J7 132 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 DNAJB3Q8WWF6 145 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 VWCEQ96DN2 955 aa9.37□□□□□ -0.91
BRCC3-205ENST00000399026 RNPC3Q96LT9 517 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms