RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 FKBP4Q02790 459 aaKnown RBP eCLIP10.33□□□□□ -0.76
SF3A3-201ENST00000373019 TTLL12Q14166 644 aaPredicted RBP10.33□□□□□ -0.76
SF3A3-201ENST00000373019 SLC29A2Q14542 456 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 P3H1Q32P28 736 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 WASHC2DQ5SRD0 308 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 MFSD4BQ5TF39 518 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 PACSIN1Q9BY11 444 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 MYLK2Q9H1R3 596 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 PCDH18Q9HCL0 1135 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 HAO1Q9UJM8 370 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 SLC12A7Q9Y666 1083 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 TACC3Q9Y6A5 838 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 CETN3O15182 167 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 KCNQ2O43526 872 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 DEXIO95424 95 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 VIL1P09327 827 aaKnown RBP10.33□□□□□ -0.76
SF3A3-201ENST00000373019 CREB1P16220 341 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 PHEXP78562 749 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 NAALADL2Q58DX5 795 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 TMEM67Q5HYA8 995 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 CEP128Q6ZU80 1094 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 ZC3H18Q86VM9 953 aaKnown RBP10.33□□□□□ -0.76
SF3A3-201ENST00000373019 COL23A1Q86Y22 540 aaPredicted RBP10.33□□□□□ -0.76
SF3A3-201ENST00000373019 ARHGAP18Q8N392 663 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 EPS8L3Q8TE67 593 aaKnown RBP10.33□□□□□ -0.76
SF3A3-201ENST00000373019 FMO2Q99518 471 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 MTA3Q9BTC8 594 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 SPATA7Q9P0W8 599 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 INTUQ9ULD6 942 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 WDR37Q9Y2I8 494 aa10.33□□□□□ -0.76
SF3A3-201ENST00000373019 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.32□□□□□ -0.76
SF3A3-201ENST00000373019 CCDC169A6NNP5 214 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 PAX3P23760 479 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 TARSP26639 723 aaKnown RBP10.32□□□□□ -0.76
SF3A3-201ENST00000373019 SESN3P58005 492 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 RTP1P59025 263 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 DAB2IPQ5VWQ8 1189 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 PTF1AQ7RTS3 328 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 RIC3Q7Z5B4 369 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 AGGF1Q8N302 714 aaeCLIP10.32□□□□□ -0.76
SF3A3-201ENST00000373019 ARL10Q8N8L6 244 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 HIC2Q96JB3 615 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 ZMYND12Q9H0C1 365 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 DHX36Q9H2U1 1008 aaKnown RBP10.32□□□□□ -0.76
SF3A3-201ENST00000373019 ZSWIM5Q9P217 1185 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 BARX2Q9UMQ3 279 aaPredicted RBP10.32□□□□□ -0.76
SF3A3-201ENST00000373019 CHMP2BQ9UQN3 213 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 NOC2LQ9Y3T9 749 aaKnown RBP10.32□□□□□ -0.76
SF3A3-201ENST00000373019 A0A0J9YVX5 310 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 PSMA7O14818 248 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 PRPF3O43395 683 aaKnown RBP10.32□□□□□ -0.76
SF3A3-201ENST00000373019 CEP104O60308 925 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 DDX58O95786 925 aaKnown RBP10.32□□□□□ -0.76
SF3A3-201ENST00000373019 SKIP12755 728 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 IGHMBP2P38935 993 aaKnown RBP10.32□□□□□ -0.76
SF3A3-201ENST00000373019 MTIF2P46199 727 aaKnown RBP10.32□□□□□ -0.76
SF3A3-201ENST00000373019 GJA8P48165 433 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 CABP4P57796 275 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 NLRP5P59047 1200 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 LIN52Q52LA3 116 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 KBTBD2Q8IY47 623 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 STKLD1Q8NE28 680 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 DHTKD1Q96HY7 919 aaPredicted RBP10.32□□□□□ -0.76
SF3A3-201ENST00000373019 MYD88Q99836 296 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 TRIM51Q9BSJ1 452 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 DDX21Q9NR30 783 aaKnown RBP eCLIP10.32□□□□□ -0.76
SF3A3-201ENST00000373019 INIPQ9NRY2 104 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 DBR1Q9UK59 544 aaKnown RBP10.32□□□□□ -0.76
SF3A3-201ENST00000373019 RHOBTB3O94955 611 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 LYNP07948 512 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 ITGA2BP08514 1039 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 ZCCHC18P0CG32 403 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 HMGB2P26583 209 aaKnown RBP10.32□□□□□ -0.76
SF3A3-201ENST00000373019 VARSP26640 1264 aaKnown RBP10.32□□□□□ -0.76
SF3A3-201ENST00000373019 PMS2P54278 862 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 LMNB2Q03252 620 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 KLRC3Q07444 240 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 KCNMA1Q12791 1236 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 AUHQ13825 339 aaKnown RBP10.32□□□□□ -0.76
SF3A3-201ENST00000373019 SMIM5Q71RC9 77 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 LZICQ8WZA0 190 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 APPBP2Q92624 585 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 OXCT2Q9BYC2 517 aaPredicted RBP10.32□□□□□ -0.76
SF3A3-201ENST00000373019 KIAA1683Q9H0B3 1180 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 TXLNGQ9NUQ3 528 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.32□□□□□ -0.763e-7■■■■□ 19.8
SF3A3-201ENST00000373019 TMOD3Q9NYL9 352 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 RPTORQ8N122 1335 aa10.32□□□□□ -0.76
SF3A3-201ENST00000373019 UBTFL6P0CB48 400 aaPredicted RBP10.31□□□□□ -0.76
SF3A3-201ENST00000373019 SLCO1A2P46721 670 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 USP11P51784 963 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 ACVR2BQ13705 512 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 WDR72Q3MJ13 1102 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 CCDC152Q4G0S7 254 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 TBC1D9BQ66K14 1250 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 PDXDC1Q6P996 788 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 RINLQ6ZS11 566 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 TRIM22Q8IYM9 498 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 METTL13Q8N6R0 699 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 MGARPQ8TDB4 240 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms