RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 INTS1Q8N201 2190 aaKnown RBP6.28□□□□□ -1.4
CD47-201ENST00000355354 HCRTO43612 131 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 UFL1O94874 794 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 HUNKP57058 714 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 IFI35P80217 286 aaPredicted RBP6.28□□□□□ -1.4
CD47-201ENST00000355354 IRF5Q13568 498 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 TMED8Q6PL24 325 aaPredicted RBP6.28□□□□□ -1.4
CD47-201ENST00000355354 CNNM3Q8NE01 707 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 AIDAQ96BJ3 306 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 ZSWIM1Q9BR11 485 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 TMOD4Q9NZQ9 345 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 RIPK3Q9Y572 518 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 PCDHA2Q9Y5H9 948 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 ARFGEF3Q5TH69 2177 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 MFAP3LO75121 409 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 MCM5P33992 734 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 FNTAP49354 379 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 RABGGTBP53611 331 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 NLRP12P59046 1061 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 BAG1Q99933 345 aaPredicted RBP6.28□□□□□ -1.4
CD47-201ENST00000355354 GRID1Q9ULK0 1009 aa6.28□□□□□ -1.4
CD47-201ENST00000355354 ZMYM6O95789 1325 aa6.27□□□□□ -1.4
CD47-201ENST00000355354 ALCAMQ13740 583 aa6.27□□□□□ -1.4
CD47-201ENST00000355354 SNX17Q15036 470 aa6.27□□□□□ -1.4
CD47-201ENST00000355354 HABP4Q5JVS0 413 aaKnown RBP6.27□□□□□ -1.4
CD47-201ENST00000355354 TTC27Q6P3X3 843 aa6.27□□□□□ -1.4
CD47-201ENST00000355354 CCDC12Q8WUD4 166 aaPredicted RBP6.27□□□□□ -1.4
CD47-201ENST00000355354 PRCCQ92733 491 aaPredicted RBP6.27□□□□□ -1.4
CD47-201ENST00000355354 TRIM9Q9C026 710 aa6.27□□□□□ -1.4
CD47-201ENST00000355354 AAASQ9NRG9 546 aa6.27□□□□□ -1.4
CD47-201ENST00000355354 LNPEPQ9UIQ6 1025 aa6.27□□□□□ -1.4
CD47-201ENST00000355354 KCNG1Q9UIX4 513 aa6.27□□□□□ -1.4
CD47-201ENST00000355354 ADGRA3Q8IWK6 1321 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 H7C1D1 291 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 SLU7O95391 586 aaKnown RBP6.27□□□□□ -1.41
CD47-201ENST00000355354 LIG3P49916 1009 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 ZYXQ15942 572 aaKnown RBP6.27□□□□□ -1.41
CD47-201ENST00000355354 SLC17A8Q8NDX2 589 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 UTP4Q969X6 686 aaKnown RBP6.27□□□□□ -1.41
CD47-201ENST00000355354 DDX47Q9H0S4 455 aaKnown RBP6.27□□□□□ -1.41
CD47-201ENST00000355354 SH2B1Q9NRF2 756 aaPredicted RBP6.27□□□□□ -1.41
CD47-201ENST00000355354 TOPORSQ9NS56 1045 aaPredicted RBP6.27□□□□□ -1.41
CD47-201ENST00000355354 MROH5Q6ZUA9 1318 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 A0A1W2PPC1 479 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 SOX1O00570 391 aaPredicted RBP6.27□□□□□ -1.41
CD47-201ENST00000355354 TRIM49P0CI25 452 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 TRIM49CP0CI26 452 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 GUCY2FP51841 1108 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 MYL5Q02045 173 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 LMBRD2Q68DH5 695 aaPredicted RBP6.27□□□□□ -1.41
CD47-201ENST00000355354 ANKRD23Q86SG2 305 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 RUSC1Q9BVN2 902 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 NOTCH3Q9UM47 2321 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 USP24Q9UPU5 2620 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 USP17L10C9JJH3 530 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 CLIC2O15247 247 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 KINO60870 393 aaKnown RBP6.27□□□□□ -1.41
CD47-201ENST00000355354 HACE1Q8IYU2 909 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 KIAA0319LQ8IZA0 1049 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 SH3RF2Q8TEC5 729 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 TRIM47Q96LD4 638 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 VPS18Q9P253 973 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 FNDC1Q4ZHG4 1894 aaPredicted RBP6.27□□□□□ -1.41
CD47-201ENST00000355354 PFASO15067 1338 aa6.27□□□□□ -1.41
CD47-201ENST00000355354 GOLGA8AA7E2F4 631 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 H0YGN5 161 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 SPATA31C1P0DKV0 1188 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 FASTKD3Q14CZ7 662 aaKnown RBP6.26□□□□□ -1.41
CD47-201ENST00000355354 CGB2Q6NT52 195 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 ADAMTS5Q9UNA0 930 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 NFS1Q9Y697 457 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 GJA3Q9Y6H8 435 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 SMAPO00193 183 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 SERPINC1P01008 464 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 PDHBP11177 359 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 USP5P45974 858 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 FAM193AP78312 1265 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 PPIL2Q13356 520 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 GJC2Q5T442 439 aaPredicted RBP6.26□□□□□ -1.41
CD47-201ENST00000355354 TP53INP2Q8IXH6 220 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 SLC20A1Q8WUM9 679 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 PIWIL1Q96J94 861 aaKnown RBP6.26□□□□□ -1.41
CD47-201ENST00000355354 GDF15Q99988 308 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 CYP26B1Q9NR63 512 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 PATJQ8NI35 1801 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 FRMD3A2A2Y4 597 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 DDX3XO00571 662 aaKnown RBP eCLIP6.26□□□□□ -1.411e-10■■■■■ 37.2
CD47-201ENST00000355354 OLIG2Q13516 323 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 LETM2Q2VYF4 491 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 ZCWPW2Q504Y3 356 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 SPECC1LQ69YQ0 1117 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 TAB3Q8N5C8 712 aaPredicted RBP6.26□□□□□ -1.41
CD47-201ENST00000355354 HAPLN2Q9GZV7 340 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 FAM107BQ9H098 131 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 PCDHA6Q9UN73 950 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 PCDHA8Q9Y5H6 950 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 AK5Q9Y6K8 562 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 FANCMQ8IYD8 2048 aa6.26□□□□□ -1.41
CD47-201ENST00000355354 MANSC4A6NHS7 340 aaPredicted RBP6.26□□□□□ -1.41
CD47-201ENST00000355354 TMCO5BA8MYB1 307 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms