RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 USO1O60763 962 aaKnown RBP16.26■□□□□ 0.19
CXCL12-201ENST00000343575 HIP1RO75146 1068 aa16.26■□□□□ 0.19
CXCL12-201ENST00000343575 OATP04181 439 aa16.26■□□□□ 0.19
CXCL12-201ENST00000343575 HOXD8P13378 290 aaPredicted RBP16.26■□□□□ 0.19
CXCL12-201ENST00000343575 IRX5P78411 483 aaPredicted RBP16.26■□□□□ 0.19
CXCL12-201ENST00000343575 MYL5Q02045 173 aa16.26■□□□□ 0.19
CXCL12-201ENST00000343575 TNFAIP2Q03169 654 aa16.26■□□□□ 0.19
CXCL12-201ENST00000343575 PSMD2Q13200 908 aa16.26■□□□□ 0.19
CXCL12-201ENST00000343575 LRRC41Q15345 812 aa16.26■□□□□ 0.19
CXCL12-201ENST00000343575 TARBP2Q15633 366 aaKnown RBP16.26■□□□□ 0.19
CXCL12-201ENST00000343575 FAM26FQ5R3K3 315 aa16.26■□□□□ 0.19
CXCL12-201ENST00000343575 NIFKQ9BYG3 293 aaKnown RBP16.26■□□□□ 0.19
CXCL12-201ENST00000343575 XPNPEP1Q9NQW7 623 aa16.26■□□□□ 0.19
CXCL12-201ENST00000343575 CYP26B1Q9NR63 512 aa16.26■□□□□ 0.19
CXCL12-201ENST00000343575 DACH1Q9UI36 760 aa16.26■□□□□ 0.19
CXCL12-201ENST00000343575 DKC1O60832 514 aaKnown RBP eCLIP16.25■□□□□ 0.19
CXCL12-201ENST00000343575 TRIM32Q13049 653 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 OTUD6AQ7L8S5 288 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 PLPPR4Q7Z2D5 763 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 TSC1Q92574 1164 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 CCDC47Q96A33 483 aaKnown RBP16.25■□□□□ 0.19
CXCL12-201ENST00000343575 CEP170P1Q96L14 293 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 GPRC5CQ9NQ84 441 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 SEPT9Q9UHD8 586 aaPredicted RBP16.25■□□□□ 0.19
CXCL12-201ENST00000343575 ODF2LQ9ULJ1 636 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 CTNND2Q9UQB3 1225 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 CASP8AP2Q9UKL3 1982 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 TRIM49BA6NDI0 452 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 BECN2A8MW95 431 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 ZBTB42B2RXF5 422 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 NKRFO15226 690 aaKnown RBP eCLIP16.25■□□□□ 0.19
CXCL12-201ENST00000343575 MAEAQ7L5Y9 396 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 EPM2AIP1Q7L775 607 aaPredicted RBP16.25■□□□□ 0.19
CXCL12-201ENST00000343575 NELFBQ8WX92 580 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 C16orf70Q9BSU1 422 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 ZHX3Q9H4I2 956 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 FANCLQ9NW38 375 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 RWDD2AQ9UIY3 292 aa16.25■□□□□ 0.19
CXCL12-201ENST00000343575 LGALS2P05162 132 aa16.24■□□□□ 0.19
CXCL12-201ENST00000343575 CYBAP13498 195 aa16.24■□□□□ 0.19
CXCL12-201ENST00000343575 HOXD13P35453 343 aa16.24■□□□□ 0.19
CXCL12-201ENST00000343575 SOX10P56693 466 aa16.24■□□□□ 0.19
CXCL12-201ENST00000343575 PAK1Q13153 545 aa16.24■□□□□ 0.19
CXCL12-201ENST00000343575 PLCB4Q15147 1175 aa16.24■□□□□ 0.19
CXCL12-201ENST00000343575 FAM160B1Q5W0V3 765 aa16.24■□□□□ 0.19
CXCL12-201ENST00000343575 GUF1Q8N442 669 aaKnown RBP16.24■□□□□ 0.19
CXCL12-201ENST00000343575 SCFD1Q8WVM8 642 aa16.24■□□□□ 0.19
CXCL12-201ENST00000343575 SEMA6BQ9H3T3 888 aa16.24■□□□□ 0.19
CXCL12-201ENST00000343575 RNPEPQ9H4A4 650 aa16.24■□□□□ 0.19
CXCL12-201ENST00000343575 OLFML3Q9NRN5 406 aa16.24■□□□□ 0.19
CXCL12-201ENST00000343575 SRRDQ9UH36 339 aa16.24■□□□□ 0.19
CXCL12-201ENST00000343575 COL4A3BPQ9Y5P4 624 aa16.24■□□□□ 0.19
CXCL12-201ENST00000343575 MYH11P35749 1972 aa16.23■□□□□ 0.19
CXCL12-201ENST00000343575 MMP3P08254 477 aa16.23■□□□□ 0.19
CXCL12-201ENST00000343575 ATP1A3P13637 1013 aa16.23■□□□□ 0.19
CXCL12-201ENST00000343575 ZNF18P17022 549 aa16.23■□□□□ 0.19
CXCL12-201ENST00000343575 MARK3P27448 753 aa16.23■□□□□ 0.19
CXCL12-201ENST00000343575 KIF22Q14807 665 aa16.23■□□□□ 0.19
CXCL12-201ENST00000343575 MTERF2Q49AM1 385 aa16.23■□□□□ 0.19
CXCL12-201ENST00000343575 TTI2Q6NXR4 508 aa16.23■□□□□ 0.19
CXCL12-201ENST00000343575 CREBRFQ8IUR6 639 aa16.23■□□□□ 0.19
CXCL12-201ENST00000343575 SPC24Q8NBT2 197 aa16.23■□□□□ 0.19
CXCL12-201ENST00000343575 ZNF296Q8WUU4 475 aaPredicted RBP16.23■□□□□ 0.19
CXCL12-201ENST00000343575 GLG1Q92896 1179 aa16.23■□□□□ 0.19
CXCL12-201ENST00000343575 DHX33Q9H6R0 707 aaKnown RBP16.23■□□□□ 0.19
CXCL12-201ENST00000343575 AZI2Q9H6S1 392 aa16.23■□□□□ 0.19
CXCL12-201ENST00000343575 PARVGQ9HBI0 331 aa16.23■□□□□ 0.19
CXCL12-201ENST00000343575 SAMSN1Q9NSI8 373 aaKnown RBP16.23■□□□□ 0.19
CXCL12-201ENST00000343575 SAGE1Q9NXZ1 904 aa16.23■□□□□ 0.19
CXCL12-201ENST00000343575 NFE2L3Q9Y4A8 694 aa16.23■□□□□ 0.19
CXCL12-201ENST00000343575 SYNRGQ9UMZ2 1314 aa16.23■□□□□ 0.19
CXCL12-201ENST00000343575 CEP350Q5VT06 3117 aa16.23■□□□□ 0.19
CXCL12-201ENST00000343575 DYNC1LI2O43237 492 aaPredicted RBP16.22■□□□□ 0.19
CXCL12-201ENST00000343575 PPFIA4O75335 1185 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 TBCAO75347 108 aaKnown RBP16.22■□□□□ 0.19
CXCL12-201ENST00000343575 FAM13AO94988 1023 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 MYBP10242 640 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 GAP43P17677 238 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 ZNF75DP51815 510 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 SPATA1Q5VX52 437 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 CENPPQ6IPU0 288 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 MYCT1Q8N699 235 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 CCDC112Q8NEF3 446 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 OR6J1Q8NGC5 347 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 ATP8B4Q8TF62 1192 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 DHTKD1Q96HY7 919 aaPredicted RBP16.22■□□□□ 0.19
CXCL12-201ENST00000343575 DUSP9Q99956 384 aaKnown RBP16.22■□□□□ 0.19
CXCL12-201ENST00000343575 SMARCAD1Q9H4L7 1026 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 A6NJR5 290 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 GOLGA6L19H0YKK7 550 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 DGAT1O75907 488 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 ELNP15502 786 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 HSPA6P17066 643 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 CCNE1P24864 410 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 NMT1P30419 496 aaKnown RBP16.22■□□□□ 0.19
CXCL12-201ENST00000343575 CACNB2Q08289 660 aaPredicted RBP16.22■□□□□ 0.19
CXCL12-201ENST00000343575 NCBP1Q09161 790 aaKnown RBP16.22■□□□□ 0.19
CXCL12-201ENST00000343575 KCNA1Q09470 495 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 ANKRD40Q6AI12 368 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 BBXQ8WY36 941 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms