RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 LARSQ9P2J5 1176 aaKnown RBP19.16■□□□□ 0.66
CLDN4-201ENST00000340958 PTCH2Q9Y6C5 1203 aa19.16■□□□□ 0.66
CLDN4-201ENST00000340958 BRCA2P51587 3418 aa19.16■□□□□ 0.66
CLDN4-201ENST00000340958 PRKCZQ05513 592 aa19.16■□□□□ 0.66
CLDN4-201ENST00000340958 FILIP1LQ4L180 1135 aa19.16■□□□□ 0.66
CLDN4-201ENST00000340958 TTI2Q6NXR4 508 aa19.16■□□□□ 0.66
CLDN4-201ENST00000340958 CTAGE1Q96RT6 745 aa19.16■□□□□ 0.66
CLDN4-201ENST00000340958 FGFBP2Q9BYJ0 223 aa19.16■□□□□ 0.66
CLDN4-201ENST00000340958 CYP26B1Q9NR63 512 aa19.16■□□□□ 0.66
CLDN4-201ENST00000340958 SRRDQ9UH36 339 aa19.16■□□□□ 0.66
CLDN4-201ENST00000340958 LOXHD1Q8IVV2 1947 aa19.15■□□□□ 0.66
CLDN4-201ENST00000340958 MCM3APO60318 1980 aa19.15■□□□□ 0.66
CLDN4-201ENST00000340958 DGAT1O75907 488 aa19.15■□□□□ 0.66
CLDN4-201ENST00000340958 MYBP10242 640 aa19.15■□□□□ 0.66
CLDN4-201ENST00000340958 LRRC63Q05C16 580 aa19.15■□□□□ 0.66
CLDN4-201ENST00000340958 CENPPQ6IPU0 288 aa19.15■□□□□ 0.66
CLDN4-201ENST00000340958 FAM114A1Q8IWE2 563 aa19.15■□□□□ 0.66
CLDN4-201ENST00000340958 SCFD1Q8WVM8 642 aa19.15■□□□□ 0.66
CLDN4-201ENST00000340958 SEMA6BQ9H3T3 888 aa19.15■□□□□ 0.66
CLDN4-201ENST00000340958 THAP9Q9H5L6 903 aa19.15■□□□□ 0.66
CLDN4-201ENST00000340958 OLFML3Q9NRN5 406 aa19.15■□□□□ 0.66
CLDN4-201ENST00000340958 GABRQQ9UN88 632 aa19.15■□□□□ 0.66
CLDN4-201ENST00000340958 IGKV6D-21A0A0A0MT36 114 aa19.14■□□□□ 0.65
CLDN4-201ENST00000340958 KCNJ18B7U540 433 aa19.14■□□□□ 0.65
CLDN4-201ENST00000340958 MARK3P27448 753 aa19.14■□□□□ 0.65
CLDN4-201ENST00000340958 CASP5P51878 434 aa19.14■□□□□ 0.65
CLDN4-201ENST00000340958 POLGP54098 1239 aaPredicted RBP19.14■□□□□ 0.65
CLDN4-201ENST00000340958 KCNJ12Q14500 433 aa19.14■□□□□ 0.65
CLDN4-201ENST00000340958 TMEM63BQ5T3F8 832 aa19.14■□□□□ 0.65
CLDN4-201ENST00000340958 CDKAL1Q5VV42 579 aa19.14■□□□□ 0.65
CLDN4-201ENST00000340958 FAM167AQ96KS9 214 aa19.14■□□□□ 0.65
CLDN4-201ENST00000340958 APBA2Q99767 749 aa19.14■□□□□ 0.65
CLDN4-201ENST00000340958 ATP6V0A4Q9HBG4 840 aa19.14■□□□□ 0.65
CLDN4-201ENST00000340958 RBM47A0AV96 593 aaKnown RBP19.14■□□□□ 0.65
CLDN4-201ENST00000340958 PRPF6O94906 941 aaKnown RBP19.14■□□□□ 0.65
CLDN4-201ENST00000340958 TPM2P07951 284 aa19.14■□□□□ 0.65
CLDN4-201ENST00000340958 HOXD10P28358 340 aa19.14■□□□□ 0.65
CLDN4-201ENST00000340958 CDC25BP30305 580 aa19.14■□□□□ 0.65
CLDN4-201ENST00000340958 NMT1P30419 496 aaKnown RBP19.14■□□□□ 0.65
CLDN4-201ENST00000340958 ZNF131P52739 623 aa19.14■□□□□ 0.65
CLDN4-201ENST00000340958 GJC2Q5T442 439 aaPredicted RBP19.14■□□□□ 0.65
CLDN4-201ENST00000340958 MCPH1Q8NEM0 835 aa19.14■□□□□ 0.65
CLDN4-201ENST00000340958 AFAP1L1Q8TED9 768 aa19.14■□□□□ 0.65
CLDN4-201ENST00000340958 EEF2KMTQ96G04 330 aa19.14■□□□□ 0.65
CLDN4-201ENST00000340958 K7ENM7 598 aa19.13■□□□□ 0.65
CLDN4-201ENST00000340958 STBD1O95210 358 aa19.13■□□□□ 0.65
CLDN4-201ENST00000340958 HOXC6P09630 235 aa19.13■□□□□ 0.65
CLDN4-201ENST00000340958 PLS3P13797 630 aa19.13■□□□□ 0.65
CLDN4-201ENST00000340958 TCP11X2Q5H9J9 407 aa19.13■□□□□ 0.65
CLDN4-201ENST00000340958 IQSEC1Q6DN90 963 aa19.13■□□□□ 0.65
CLDN4-201ENST00000340958 PCYT2Q99447 389 aa19.13■□□□□ 0.65
CLDN4-201ENST00000340958 DUSP9Q99956 384 aaKnown RBP19.13■□□□□ 0.65
CLDN4-201ENST00000340958 SMARCAD1Q9H4L7 1026 aa19.13■□□□□ 0.65
CLDN4-201ENST00000340958 GPRC5CQ9NQ84 441 aa19.13■□□□□ 0.65
CLDN4-201ENST00000340958 PCDHB13Q9Y5F0 798 aa19.13■□□□□ 0.65
CLDN4-201ENST00000340958 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.12■□□□□ 0.65
CLDN4-201ENST00000340958 PES1O00541 588 aaKnown RBP19.12■□□□□ 0.65
CLDN4-201ENST00000340958 CALUO43852 315 aaPredicted RBP19.12■□□□□ 0.65
CLDN4-201ENST00000340958 ATP4AP20648 1035 aa19.12■□□□□ 0.65
CLDN4-201ENST00000340958 FLT3LGP49771 235 aa19.12■□□□□ 0.65
CLDN4-201ENST00000340958 SMTNP53814 917 aa19.12■□□□□ 0.65
CLDN4-201ENST00000340958 PRMT2P55345 433 aa19.12■□□□□ 0.65
CLDN4-201ENST00000340958 TNFAIP2Q03169 654 aa19.12■□□□□ 0.65
CLDN4-201ENST00000340958 ARHGAP1Q07960 439 aa19.12■□□□□ 0.65
CLDN4-201ENST00000340958 DMP1Q13316 513 aaPredicted RBP19.12■□□□□ 0.65
CLDN4-201ENST00000340958 KNOP1Q1ED39 458 aaKnown RBP19.12■□□□□ 0.65
CLDN4-201ENST00000340958 CCDC144BQ3MJ40 725 aa19.12■□□□□ 0.65
CLDN4-201ENST00000340958 PRAMEF19Q5SWL8 479 aa19.12■□□□□ 0.65
CLDN4-201ENST00000340958 OR6J1Q8NGC5 347 aa19.12■□□□□ 0.65
CLDN4-201ENST00000340958 SLC7A3Q8WY07 619 aa19.12■□□□□ 0.65
CLDN4-201ENST00000340958 KIFAP3Q92845 792 aa19.12■□□□□ 0.65
CLDN4-201ENST00000340958 NAP1L5Q96NT1 182 aaPredicted RBP19.12■□□□□ 0.65
CLDN4-201ENST00000340958 KATNBL1Q9H079 304 aa19.12■□□□□ 0.65
CLDN4-201ENST00000340958 TRPC6Q9Y210 931 aa19.12■□□□□ 0.65
CLDN4-201ENST00000340958 CCDC169A6NNP5 214 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 NKRFO15226 690 aaKnown RBP eCLIP19.11■□□□□ 0.65
CLDN4-201ENST00000340958 EIF3DO15371 548 aaKnown RBP eCLIP19.11■□□□□ 0.65
CLDN4-201ENST00000340958 SMPD1P17405 629 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 PTGS1P23219 599 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 EEF1GP26641 437 aaKnown RBP19.11■□□□□ 0.65
CLDN4-201ENST00000340958 CYP2C19P33261 490 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 PEX3P56589 373 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 MAPK7Q13164 816 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 CCL14Q16627 93 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 DUSP28Q4G0W2 176 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 OLFML2BQ68BL8 750 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 PLPPR4Q7Z2D5 763 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 ZNF720Q7Z2F6 126 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 TRIM50Q86XT4 487 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 DAW1Q8N136 415 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 PPTC7Q8NI37 304 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 FLRT1Q9NZU1 646 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 ZNF236Q9UL36 1845 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 LGR5O75473 907 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 MTIF2P46199 727 aaKnown RBP19.11■□□□□ 0.65
CLDN4-201ENST00000340958 SLC26A2P50443 739 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 FKBP3Q00688 224 aaKnown RBP19.11■□□□□ 0.65
CLDN4-201ENST00000340958 ZC2HC1CQ53FD0 456 aaPredicted RBP19.11■□□□□ 0.65
CLDN4-201ENST00000340958 PPP4R3CPQ6ZMV5 832 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 EPM2AIP1Q7L775 607 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms