RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 ANKRD27Q96NW4 1050 aa17.88■□□□□ 0.45
PACS1-201ENST00000320580 METTL5Q9NRN9 209 aaKnown RBP17.88■□□□□ 0.45
PACS1-201ENST00000320580 CALUO43852 315 aaPredicted RBP17.88■□□□□ 0.45
PACS1-201ENST00000320580 DKC1O60832 514 aaKnown RBP eCLIP17.88■□□□□ 0.45
PACS1-201ENST00000320580 CACNB1Q02641 598 aaPredicted RBP17.88■□□□□ 0.45
PACS1-201ENST00000320580 LRRC63Q05C16 580 aa17.88■□□□□ 0.45
PACS1-201ENST00000320580 BICD1Q96G01 975 aa17.88■□□□□ 0.45
PACS1-201ENST00000320580 SLC52A2Q9HAB3 445 aa17.88■□□□□ 0.45
PACS1-201ENST00000320580 PBX1P40424 430 aa17.88■□□□□ 0.45
PACS1-201ENST00000320580 SCARF1Q14162 830 aa17.88■□□□□ 0.45
PACS1-201ENST00000320580 PUM3Q15397 648 aaKnown RBP17.88■□□□□ 0.45
PACS1-201ENST00000320580 PRPF31Q8WWY3 499 aaKnown RBP17.88■□□□□ 0.45
PACS1-201ENST00000320580 PIH1D3Q9NQM4 214 aaKnown RBP17.88■□□□□ 0.45
PACS1-201ENST00000320580 A8MUI8 341 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 CAPN9O14815 690 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 ACADSP16219 412 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 HSPA6P17066 643 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 GRIK3Q13003 919 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 PSMD6Q15008 389 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 SLC44A4Q53GD3 710 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 SGO2Q562F6 1265 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 BARGINQ6ZT62 677 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 ERGIC2Q96RQ1 377 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 STRBPQ96SI9 672 aaKnown RBP17.87■□□□□ 0.45
PACS1-201ENST00000320580 PABPC3Q9H361 631 aaKnown RBP17.87■□□□□ 0.45
PACS1-201ENST00000320580 PXDNLA1KZ92 1463 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 USP17L12C9JPN9 530 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 USP17L21D6R901 530 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 DNAJC6O75061 913 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 FAM13AO94988 1023 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 IFNB1P01574 187 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 KRT16P08779 473 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 CALB2P22676 271 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 A0A087X0B3 334 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 FAM237AA0A1B0GTK4 181 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 A0A1W2PQJ5 194 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 FAM187AA6NFU0 413 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 G3V3G9 751 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 IRF6O14896 467 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 LACTB2Q53H82 288 aaPredicted RBP17.87■□□□□ 0.45
PACS1-201ENST00000320580 DCAF8Q5TAQ9 597 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 GLG1Q92896 1179 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 KAZALD1Q96I82 304 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 THEGQ9P2T0 379 aa17.87■□□□□ 0.45
PACS1-201ENST00000320580 SMCO2A6NFE2 343 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 LRRC10BA6NIK2 292 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 RTN3O95197 1032 aaPredicted RBP17.86■□□□□ 0.45
PACS1-201ENST00000320580 IFI35P80217 286 aaPredicted RBP17.86■□□□□ 0.45
PACS1-201ENST00000320580 METTL13Q8N6R0 699 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 TRIM33Q9UPN9 1127 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 THRAP3Q9Y2W1 955 aaKnown RBP17.86■□□□□ 0.45
PACS1-201ENST00000320580 LMNB1P20700 586 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 ERMARDQ5T6L9 678 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 GPBP1Q86WP2 473 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 OVOS2A0A0J9YW53 1432 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 OVOS2Q6IE36 1432 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 MKRN4PQ13434 485 aaPredicted RBP17.86■□□□□ 0.45
PACS1-201ENST00000320580 C1orf146Q5VVC0 180 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 RASSF3Q86WH2 238 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 MREGQ8N565 214 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 ZMAT2Q96NC0 199 aaKnown RBP17.86■□□□□ 0.45
PACS1-201ENST00000320580 TSPYL2Q9H2G4 693 aaPredicted RBP17.86■□□□□ 0.45
PACS1-201ENST00000320580 DCLRE1BQ9H816 532 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 FRMD4BQ9Y2L6 1034 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 SMNDC1O75940 238 aaKnown RBP eCLIP17.86■□□□□ 0.45
PACS1-201ENST00000320580 PMS1P54277 932 aaKnown RBP17.86■□□□□ 0.45
PACS1-201ENST00000320580 KCNMA1Q12791 1236 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 NEK8Q86SG6 692 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 RDH13Q8NBN7 331 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 RNPEPL1Q9HAU8 725 aa17.86■□□□□ 0.45
PACS1-201ENST00000320580 RNF8O76064 485 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 RAB27AP51159 221 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 USP11P51784 963 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 RIPK1Q13546 671 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 STK32AQ8WU08 396 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 AK8Q96MA6 479 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 RXFP1Q9HBX9 757 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 PCDHA4Q9UN74 947 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 WDR17Q8IZU2 1322 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 CIAO1O76071 339 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 FESP07332 822 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 MCAMP43121 646 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 TMEM237Q96Q45 408 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 ERP44Q9BS26 406 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 USTQ9Y2C2 406 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 GCLCP48506 637 aaPredicted RBP17.85■□□□□ 0.45
PACS1-201ENST00000320580 MEA1Q16626 185 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 RNF220Q5VTB9 566 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 REXO1Q8N1G1 1221 aaKnown RBP17.85■□□□□ 0.45
PACS1-201ENST00000320580 LRCH1Q9Y2L9 728 aa17.85■□□□□ 0.45
PACS1-201ENST00000320580 GCNT3O95395 438 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 PHKG2P15735 406 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 TNFRSF8P28908 595 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 GSTT1P30711 240 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 TMC3Q7Z5M5 1100 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 LCA5Q86VQ0 697 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 LCORLQ8N3X6 602 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 GRK7Q8WTQ7 553 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 TRIM55Q9BYV6 548 aa17.84■□□□□ 0.45
PACS1-201ENST00000320580 TMOD4Q9NZQ9 345 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms