RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 TNFAIP1Q13829 316 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 CATSPER3Q86XQ3 398 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 ABCB6Q9NP58 842 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 GTSE1Q9NYZ3 720 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 LMCD1Q9NZU5 365 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 SLC12A6Q9UHW9 1150 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 SUGT1Q9Y2Z0 365 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 F5H423 210 aaPredicted RBP5.95□□□□□ -1.46
CPSF2-201ENST00000298875 AK8Q96MA6 479 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 TTC25Q96NG3 672 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 BRIP1Q9BX63 1249 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.95□□□□□ -1.468e-7■■■□□ 15.8
CPSF2-201ENST00000298875 ARL2BPQ9Y2Y0 163 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 PCDHA1Q9Y5I3 950 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 EIF4E1BA6NMX2 242 aaKnown RBP5.95□□□□□ -1.46
CPSF2-201ENST00000298875 ZBED1O96006 694 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 HOXB7P09629 217 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 EIF4A3P38919 411 aaKnown RBP5.95□□□□□ -1.46
CPSF2-201ENST00000298875 MMP14P50281 582 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 STAT2P52630 851 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 CYLC2Q14093 348 aaPredicted RBP5.95□□□□□ -1.46
CPSF2-201ENST00000298875 CRYMQ14894 314 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 PYROXD1Q8WU10 500 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 TGS1Q96RS0 853 aaKnown RBP5.95□□□□□ -1.46
CPSF2-201ENST00000298875 KLC2Q9H0B6 622 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.95□□□□□ -1.46
CPSF2-201ENST00000298875 SNX2O60749 519 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 AP2B1P63010 937 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 ACBD5Q5T8D3 534 aaPredicted RBP5.95□□□□□ -1.46
CPSF2-201ENST00000298875 KIAA0825Q8IV33 1275 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 ABI1Q8IZP0 508 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 RETREG2Q8NC44 543 aa5.95□□□□□ -1.46
CPSF2-201ENST00000298875 FTOQ9C0B1 505 aaKnown RBP eCLIP5.95□□□□□ -1.46
CPSF2-201ENST00000298875 NXF1Q9UBU9 619 aaKnown RBP5.95□□□□□ -1.46
CPSF2-201ENST00000298875 POLR1AO95602 1720 aaPredicted RBP5.95□□□□□ -1.46
CPSF2-201ENST00000298875 LRRIQ3A6PVS8 624 aaPredicted RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 OR6B2Q6IFH4 312 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 VSTM4Q8IW00 320 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 DACH2Q96NX9 599 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 MMTAG2Q9BU76 263 aaKnown RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 YIPF3Q9GZM5 350 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 ECT2Q9H8V3 914 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 PPARGC1AQ9UBK2 798 aaKnown RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 PNMA2Q9UL42 364 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 GOLGA8MH3BSY2 632 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 COPEO14579 308 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 HNRNPRO43390 633 aaKnown RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 PSMC1P62191 440 aaKnown RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 TAF1BQ53T94 588 aaPredicted RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 MRPL47Q9HD33 250 aaKnown RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 NDUFA10O95299 355 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 TMPRSS15P98073 1019 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 DCAF15Q66K64 600 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 CCDC90BQ9GZT6 254 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 ARHGAP26Q9UNA1 814 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 MECOMQ03112 1051 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 SLC27A3Q5K4L6 730 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 HORMAD1Q86X24 394 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 NLGN1Q8N2Q7 840 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 DHX38Q92620 1227 aaKnown RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 NAF1Q96HR8 494 aaKnown RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 MPP6Q9NZW5 540 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 FAM95CA0A1B0GW59 222 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 MEIS1O00470 390 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 CA4P22748 312 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 PSMA2P25787 234 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 PPARGP37231 505 aaPredicted RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 PMS1P54277 932 aaKnown RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 SLC39A14Q15043 492 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 ICA1LQ8NDH6 482 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 FAM167BQ9BTA0 163 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 THAP9Q9H5L6 903 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 WDR17Q8IZU2 1322 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 IL13P35225 146 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 IMPG1Q17R60 797 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 RWDD4Q6NW29 188 aaKnown RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 FAM81BQ96LP2 452 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 LSG1Q9H089 658 aaKnown RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 FOXP1Q9H334 677 aaPredicted RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 SAYSD1Q9NPB0 183 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 APOBEC2Q9Y235 224 aaKnown RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 ZNF18P17022 549 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 SLFN13Q68D06 897 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 EPM2AIP1Q7L775 607 aaPredicted RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 KIAA2013Q8IYS2 634 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 C7orf31Q8N865 590 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 TBCKQ8TEA7 893 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 GSDMAQ96QA5 445 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 NR1H4Q96RI1 486 aaPredicted RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 TTLL1O95922 423 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 CCDC85BQ15834 202 aaPredicted RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 FAM98CQ17RN3 349 aaKnown RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 FSCBQ5H9T9 825 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 FAF2Q96CS3 445 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 STMN3Q9NZ72 180 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 DIP2BQ9P265 1576 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 XPO1O14980 1071 aaKnown RBP5.94□□□□□ -1.46
CPSF2-201ENST00000298875 RANBP1P43487 201 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 ARPP19P56211 112 aa5.94□□□□□ -1.46
CPSF2-201ENST00000298875 AP1B1Q10567 949 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms