RNA–Protein interactions for RNA: ENST00000239367.6

LRP11-201, Transcript of LDL receptor related protein 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP11, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP11-201ENST00000239367 NUDT12Q9BQG2 462 aa17.79■□□□□ 0.44
LRP11-201ENST00000239367 TMEM59LQ9UK28 342 aa17.79■□□□□ 0.44
LRP11-201ENST00000239367 MYBP10242 640 aa17.79■□□□□ 0.44
LRP11-201ENST00000239367 ALDH5A1P51649 535 aaPredicted RBP17.79■□□□□ 0.44
LRP11-201ENST00000239367 TAF11Q15544 211 aa17.79■□□□□ 0.44
LRP11-201ENST00000239367 NUGGCQ68CJ6 796 aa17.79■□□□□ 0.44
LRP11-201ENST00000239367 GJB7Q6PEY0 223 aa17.79■□□□□ 0.44
LRP11-201ENST00000239367 FAM43BQ6ZT52 329 aaPredicted RBP17.79■□□□□ 0.44
LRP11-201ENST00000239367 MAPKAPK5Q8IW41 473 aa17.79■□□□□ 0.44
LRP11-201ENST00000239367 CALR3Q96L12 384 aaKnown RBP17.79■□□□□ 0.44
LRP11-201ENST00000239367 FGFR1OP2Q9NVK5 253 aa17.79■□□□□ 0.44
LRP11-201ENST00000239367 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.79■□□□□ 0.442e-6■■■■□ 20
LRP11-201ENST00000239367 NOP53Q9NZM5 478 aaKnown RBP17.79■□□□□ 0.44
LRP11-201ENST00000239367 RNASELQ05823 741 aaKnown RBP17.78■□□□□ 0.44
LRP11-201ENST00000239367 XRCC4Q13426 336 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 SLC29A2Q14542 456 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 DIXDC1Q155Q3 683 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 BMP2KQ9NSY1 1161 aaPredicted RBP17.78■□□□□ 0.44
LRP11-201ENST00000239367 PNMA3Q9UL41 463 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 C15orf41Q9Y2V0 281 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 SPATA31A1Q5TZJ5 1347 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 ZNF335Q9H4Z2 1342 aaPredicted RBP17.78■□□□□ 0.44
LRP11-201ENST00000239367 KIF3CO14782 793 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 EDIL3O43854 480 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 TDP2O95551 362 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 TNNI2P48788 182 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 AADACL2Q6P093 401 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 KCNK18Q7Z418 384 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 TRIM59Q8IWR1 403 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 EPS8L3Q8TE67 593 aaKnown RBP17.78■□□□□ 0.44
LRP11-201ENST00000239367 TBK1Q9UHD2 729 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 GGA2Q9UJY4 613 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 ZNF831Q5JPB2 1677 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 ERFP50548 548 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 CUL1Q13616 776 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 FAM26FQ5R3K3 315 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 LRIG3Q6UXM1 1119 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 LINC00116Q8NCU8 138 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 MRRFQ96E11 262 aaKnown RBP17.78■□□□□ 0.44
LRP11-201ENST00000239367 SETDB2Q96T68 719 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 PPP1R12CQ9BZL4 782 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 TMOD4Q9NZQ9 345 aa17.78■□□□□ 0.44
LRP11-201ENST00000239367 COL16A1Q07092 1604 aaPredicted RBP17.77■□□□□ 0.44
LRP11-201ENST00000239367 H0YGN5 161 aa17.77■□□□□ 0.44
LRP11-201ENST00000239367 MGRN1O60291 552 aa17.77■□□□□ 0.44
LRP11-201ENST00000239367 MTMR3Q13615 1198 aa17.77■□□□□ 0.44
LRP11-201ENST00000239367 TMC3Q7Z5M5 1100 aa17.77■□□□□ 0.44
LRP11-201ENST00000239367 NBPF5PQ86XG9 351 aaPredicted RBP17.77■□□□□ 0.44
LRP11-201ENST00000239367 CEP95Q96GE4 821 aa17.77■□□□□ 0.44
LRP11-201ENST00000239367 RTFDC1Q9BY42 306 aaPredicted RBP17.77■□□□□ 0.44
LRP11-201ENST00000239367 ADAM33Q9BZ11 813 aa17.77■□□□□ 0.44
LRP11-201ENST00000239367 NFS1Q9Y697 457 aa17.77■□□□□ 0.44
LRP11-201ENST00000239367 TCP11X1B4DZS4 312 aa17.77■□□□□ 0.43
LRP11-201ENST00000239367 F8VZ95 297 aa17.77■□□□□ 0.43
LRP11-201ENST00000239367 TM4SF1P30408 202 aa17.77■□□□□ 0.43
LRP11-201ENST00000239367 FGFBP2Q9BYJ0 223 aa17.77■□□□□ 0.43
LRP11-201ENST00000239367 ARHGEF10LQ9HCE6 1279 aa17.77■□□□□ 0.43
LRP11-201ENST00000239367 PPIP5K2O43314 1243 aa17.76■□□□□ 0.43
LRP11-201ENST00000239367 EIF6P56537 245 aaKnown RBP17.76■□□□□ 0.43
LRP11-201ENST00000239367 HYIQ5T013 277 aa17.76■□□□□ 0.43
LRP11-201ENST00000239367 NT5C3AQ9H0P0 336 aa17.76■□□□□ 0.43
LRP11-201ENST00000239367 USP17L5A8MUK1 530 aa17.76■□□□□ 0.43
LRP11-201ENST00000239367 ADAM9Q13443 819 aa17.76■□□□□ 0.43
LRP11-201ENST00000239367 PPP1R18Q6NYC8 613 aa17.76■□□□□ 0.43
LRP11-201ENST00000239367 TPTE2Q6XPS3 522 aa17.76■□□□□ 0.43
LRP11-201ENST00000239367 ZC3H3Q8IXZ2 948 aaKnown RBP17.76■□□□□ 0.43
LRP11-201ENST00000239367 PBKQ96KB5 322 aa17.76■□□□□ 0.43
LRP11-201ENST00000239367 OSGEPQ9NPF4 335 aa17.76■□□□□ 0.43
LRP11-201ENST00000239367 KDM3AQ9Y4C1 1321 aa17.76■□□□□ 0.43
LRP11-201ENST00000239367 GOLGA6L10A0A0M3HER8 536 aa17.76■□□□□ 0.43
LRP11-201ENST00000239367 SMIM24O75264 130 aa17.76■□□□□ 0.43
LRP11-201ENST00000239367 ECHS1P30084 290 aa17.76■□□□□ 0.43
LRP11-201ENST00000239367 IFI16Q16666 785 aaKnown RBP17.76■□□□□ 0.43
LRP11-201ENST00000239367 TLDC1Q6P9B6 456 aa17.76■□□□□ 0.43
LRP11-201ENST00000239367 SEPT14Q6ZU15 432 aa17.76■□□□□ 0.43
LRP11-201ENST00000239367 ZNF483Q8TF39 744 aaPredicted RBP17.76■□□□□ 0.43
LRP11-201ENST00000239367 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.76■□□□□ 0.43
LRP11-201ENST00000239367 RTCBQ9Y3I0 505 aaKnown RBP17.76■□□□□ 0.43
LRP11-201ENST00000239367 CNTNAP4Q9C0A0 1308 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 GFPT2O94808 682 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 ACSL3O95573 720 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 VPS41P49754 854 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 IRX1P78414 480 aaPredicted RBP17.75■□□□□ 0.43
LRP11-201ENST00000239367 TNIP1Q15025 636 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 ECM1Q16610 540 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 ASPRV1Q53RT3 343 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 ZNF571Q7Z3V5 609 aaPredicted RBP17.75■□□□□ 0.43
LRP11-201ENST00000239367 CCDC65Q8IXS2 484 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 ZNF570Q96NI8 536 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 KDM4CQ9H3R0 1056 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 SEMA4AQ9H3S1 761 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 PCDHA2Q9Y5H9 948 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 BZW2Q9Y6E2 419 aaKnown RBP17.75■□□□□ 0.43
LRP11-201ENST00000239367 KRT16P08779 473 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 PLCG2P16885 1265 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 PPP4R3CPQ6ZMV5 832 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 HOOK3Q86VS8 718 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 FBXO25Q8TCJ0 367 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 ACTRT1Q8TDG2 376 aa17.75■□□□□ 0.43
LRP11-201ENST00000239367 FAM129AQ9BZQ8 928 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms