RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 KRT222Q8N1A0 295 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 BEST2Q8NFU1 509 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 MRFAP1L1Q96HT8 127 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 SPZ1Q9BXG8 430 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 MRPL47Q9HD33 250 aaKnown RBP4.6□□□□□ -1.67
CFTR-201ENST00000003084 KCNK9Q9NPC2 374 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 NCDNQ9UBB6 729 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 SEL1LQ9UBV2 794 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.6□□□□□ -1.67
CFTR-201ENST00000003084 F5H6K3 240 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 ATMINO43313 823 aaPredicted RBP4.6□□□□□ -1.67
CFTR-201ENST00000003084 CCNE1P24864 410 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 ECE1P42892 770 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 CACNB3P54284 484 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 SLC12A2P55011 1212 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 FKBP3Q00688 224 aaKnown RBP4.6□□□□□ -1.67
CFTR-201ENST00000003084 KLRC3Q07444 240 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 SCYL2Q6P3W7 929 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 RUFY4Q6ZNE9 571 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 UNC13DQ70J99 1090 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 INTS8Q75QN2 995 aaKnown RBP4.6□□□□□ -1.67
CFTR-201ENST00000003084 ENAHQ8N8S7 591 aaPredicted RBP4.6□□□□□ -1.67
CFTR-201ENST00000003084 PAGE5Q96GU1 130 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 SPATA33Q96N06 139 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 PPANQ9NQ55 473 aaKnown RBP4.6□□□□□ -1.67
CFTR-201ENST00000003084 ADARB2Q9NS39 739 aaKnown RBP4.6□□□□□ -1.67
CFTR-201ENST00000003084 MAP3K20Q9NYL2 800 aaKnown RBP4.6□□□□□ -1.67
CFTR-201ENST00000003084 DONSONQ9NYP3 566 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 MAN1B1Q9UKM7 699 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 PDS5AQ29RF7 1337 aaKnown RBP4.6□□□□□ -1.67
CFTR-201ENST00000003084 DENND3A2RUS2 1198 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 GIPC1O14908 333 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 CAPN5O15484 640 aaPredicted RBP4.6□□□□□ -1.67
CFTR-201ENST00000003084 H2AFZP0C0S5 128 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 PLCG1P19174 1290 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 GMPSP49915 693 aaPredicted RBP4.6□□□□□ -1.67
CFTR-201ENST00000003084 TERF1P54274 439 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 BFSP1Q12934 665 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 SPP2Q13103 211 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 CTTNQ14247 550 aaKnown RBP4.6□□□□□ -1.67
CFTR-201ENST00000003084 CDC42EP5Q6NZY7 148 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 H2AFVQ71UI9 128 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 PROM2Q8N271 834 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 TDRD7Q8NHU6 1098 aaKnown RBP4.6□□□□□ -1.67
CFTR-201ENST00000003084 TUBGCP2Q9BSJ2 902 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 ZBED2Q9BTP6 218 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 XPO4Q9C0E2 1151 aaKnown RBP4.6□□□□□ -1.67
CFTR-201ENST00000003084 MTIF3Q9H2K0 278 aaKnown RBP4.6□□□□□ -1.67
CFTR-201ENST00000003084 NLRC4Q9NPP4 1024 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 SAMD15Q9P1V8 674 aa4.6□□□□□ -1.67
CFTR-201ENST00000003084 ZNF609O15014 1411 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 KAT6BQ8WYB5 2073 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 K7ERI5 159 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 TNPO2O14787 897 aaKnown RBP4.59□□□□□ -1.67
CFTR-201ENST00000003084 SH3BP5O60239 455 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 GARSP41250 739 aaKnown RBP4.59□□□□□ -1.67
CFTR-201ENST00000003084 GPC3P51654 580 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 SNAP25P60880 206 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 MCM6Q14566 821 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 ARL13BQ3SXY8 428 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 LHX8Q68G74 356 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 SGMS1Q86VZ5 419 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 SIX6OS1Q8N1H7 587 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 OR6J1Q8NGC5 347 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 ATP2A3Q93084 1043 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 CCDC127Q96BQ5 260 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 ADAM33Q9BZ11 813 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 HAUS4Q9H6D7 363 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 CALCOCO1Q9P1Z2 691 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.59□□□□□ -1.67
CFTR-201ENST00000003084 PVALEFA0A1B0GWK0 134 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 SPTLC1O15269 473 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 RHOXF2BP0C7M4 288 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 CALRP27797 417 aaKnown RBP4.59□□□□□ -1.67
CFTR-201ENST00000003084 DDIT3P35638 169 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 FCGRTP55899 365 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 FKBP1AP62942 108 aaKnown RBP4.59□□□□□ -1.67
CFTR-201ENST00000003084 MLLT1Q03111 559 aaPredicted RBP4.59□□□□□ -1.67
CFTR-201ENST00000003084 ZBTB16Q05516 673 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 GOLGA8FQ08AF8 430 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 GOLGA8DPQ0D2H9 430 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 EPHA7Q15375 998 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 UAP1Q16222 522 aaPredicted RBP4.59□□□□□ -1.67
CFTR-201ENST00000003084 ZNF449Q6P9G9 518 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 CCHCR1Q8TD31 782 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 PIK3R5Q8WYR1 880 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 BHMTQ93088 406 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 GJA10Q969M2 543 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 RHOXF2Q9BQY4 288 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 IRX2Q9BZI1 471 aaPredicted RBP4.59□□□□□ -1.67
CFTR-201ENST00000003084 PRKD2Q9BZL6 878 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 COL5A2P05997 1499 aaPredicted RBP4.59□□□□□ -1.67
CFTR-201ENST00000003084 KDM4FA0A1W2PPD8 638 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 MEIS1O00470 390 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 GH1P01241 217 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 BMP4P12644 408 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 QARSP47897 775 aaKnown RBP4.59□□□□□ -1.67
CFTR-201ENST00000003084 EVCP57679 992 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 TSPY1Q01534 308 aa4.59□□□□□ -1.67
CFTR-201ENST00000003084 TAF1CQ15572 869 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms