RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Pdha1P35486 390 aaKnown RBP9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Naf1Q3UMQ8 489 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Zc3h11aQ6NZF1 792 aaKnown RBP9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Cep135Q6P5D4 1140 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Zfp157Q6PCM4 567 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Znf598Q80YR4 908 aaKnown RBP9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Kiaa1024Q8K3V7 917 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Stxbp5Q8K400 1152 aaKnown RBP9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Mrpl19Q9D338 292 aaKnown RBP9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Fam83dQ9D7I8 585 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Tbc1d21Q9D9D3 336 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Suv39h2Q9EQQ0 477 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Utp3Q9JI13 469 aaKnown RBP9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Mtmr2Q9Z2D1 643 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Wdr17E9Q271 1322 aa9.92□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Bin2D3Z6Q9 489 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ccdc24E9PUW8 296 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Gm8050L7N2E3 205 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Rag1P15919 1040 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 RdxP26043 583 aaKnown RBP9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Kansl1lQ5DTI6 991 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Rexo4Q6PAQ4 432 aaKnown RBP9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Pcdh8Q7TSK3 1070 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Bhlhe23Q8BGW3 223 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Prss50Q8BLH5 439 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Slc35g1Q8BY79 368 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Crispld2Q8BZQ2 495 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Gpc3Q8CFZ4 579 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ppp1r16bQ8VHQ3 568 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ppp2r5dQ91V89 594 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Cdc26Q99JP4 85 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Rpusd4Q9CWX4 377 aaKnown RBP9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Mis12Q9CY25 206 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Syce1Q9D495 329 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ndufv2Q9D6J6 248 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 RtcAQ9D7H3 366 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Usp29Q9ES63 869 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 IkQ9Z1M8 557 aaKnown RBP9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 N4bp2F8VQG7 1678 aaKnown RBP9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Slc27a3O88561 667 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 AaasP58742 546 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Casp4P70343 373 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ppp1r21Q3TDD9 780 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Gpr162Q3UN16 588 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Kcnh1Q60603 989 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Cct8l1Q80YT3 562 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Fbxl21Q8BFZ4 434 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Nup93Q8BJ71 819 aaKnown RBP9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Mov10l1Q99MV5 1187 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Kat2bQ9JHD1 813 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Trem1Q9JKE2 230 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Srcin1Q9QWI6 1250 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Znhit2Q9QY66 399 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 NktrP30415 1453 aa9.91□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Apol6B7ZC55 329 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Pdlim1O70400 327 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Yme1l1O88967 715 aaKnown RBP9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Etv1P41164 477 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Trim43bP86448 445 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 LvrnQ2KHK3 559 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Aifm3Q3TY86 605 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ampd1Q3V1D3 745 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 SpdyaQ5IBH7 310 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Arhgef39Q66JY6 344 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Traf3ip3Q8C0G2 513 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Csgalnact2Q8C1F4 542 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Cep57Q8CEE0 500 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Rtn1Q8K0T0 780 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Acap1Q8K2H4 740 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Acat1Q8QZT1 424 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Sgpl1Q8R0X7 568 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Chmp7Q8R1T1 451 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 McamQ8R2Y2 648 aaKnown RBP9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Olfr807Q8VGI9 311 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Rbm47Q91WT8 590 aaKnown RBP9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Acsbg1Q99PU5 721 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Dnajc18Q9CZJ9 357 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ppil6Q9D6D8 278 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 LactbQ9EP89 551 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Pold3Q9EQ28 462 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Trpc3Q9QZC1 836 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ehd1Q9WVK4 534 aaKnown RBP9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Dio2Q9Z1Y9 266 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Abcc10Q8R4P9 1501 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Rad21l1A2AU37 552 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Gm8857L7N291 182 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Xbp1O35426 267 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Slc16a2O70324 545 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Csf1P07141 552 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Lmnb2P21619 596 aaKnown RBP9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Cct8P42932 548 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Pcbp1P60335 356 aaKnown RBP9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ssrp1Q08943 708 aaKnown RBP9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Lrriq3Q14DL3 633 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Thsd4Q3UTY6 1018 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Slc34a1Q60825 637 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 SspnQ62147 216 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Usp1Q8BJQ2 784 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 BroxQ8K2Q7 411 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ddx54Q8K4L0 874 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 56.8 ms