RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W VAC14Q06708 880 aa3.44□□□□□ -1.86
HSH49YOR319W MDM36Q06820 579 aa3.44□□□□□ -1.86
HSH49YOR319W SHS1Q07657 551 aa3.44□□□□□ -1.86
HSH49YOR319W HEM15P16622 393 aa3.43□□□□□ -1.86
HSH49YOR319W YPS1P32329 569 aa3.43□□□□□ -1.86
HSH49YOR319W PHA2P32452 334 aa3.43□□□□□ -1.86
HSH49YOR319W MRPS5P33759 307 aa3.43□□□□□ -1.86
HSH49YOR319W GPX2P38143 162 aa3.43□□□□□ -1.86
HSH49YOR319W PEX32P38292 413 aa3.43□□□□□ -1.86
HSH49YOR319W GEP4P38812 185 aa3.43□□□□□ -1.86
HSH49YOR319W PEX18P38855 283 aa3.43□□□□□ -1.86
HSH49YOR319W GCD14P46959 383 aaPredicted RBP3.43□□□□□ -1.86
HSH49YOR319W MSO1P53604 210 aaKnown RBP3.43□□□□□ -1.86
HSH49YOR319W DBP6P53734 629 aaKnown RBP3.43□□□□□ -1.86
HSH49YOR319W TRM112P53738 135 aaPredicted RBP3.43□□□□□ -1.86
HSH49YOR319W HXT11P54862 567 aa3.43□□□□□ -1.86
HSH49YOR319W SCW10Q04951 389 aa3.43□□□□□ -1.86
HSH49YOR319W APC5Q08683 685 aa3.43□□□□□ -1.86
HSH49YOR319W AHC1Q12433 566 aa3.43□□□□□ -1.86
HSH49YOR319W DCP1Q12517 231 aaPredicted RBP3.43□□□□□ -1.86
HSH49YOR319W YOR338WQ99326 363 aa3.43□□□□□ -1.86
HSH49YOR319W MCK1P21965 375 aaKnown RBP3.42□□□□□ -1.86
HSH49YOR319W MXR2P25566 168 aa3.42□□□□□ -1.86
HSH49YOR319W CIN8P27895 1000 aa3.42□□□□□ -1.86
HSH49YOR319W BUD2P33314 1104 aa3.42□□□□□ -1.86
HSH49YOR319W PAD1P33751 242 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
HSH49YOR319W TIR2P33890 251 aa3.42□□□□□ -1.86
HSH49YOR319W BTT1P40314 149 aaPredicted RBP3.42□□□□□ -1.86
HSH49YOR319W CDC40P40968 455 aaPredicted RBP3.42□□□□□ -1.86
HSH49YOR319W COS1P53822 381 aa3.42□□□□□ -1.86
HSH49YOR319W GOR1P53839 350 aa3.42□□□□□ -1.86
HSH49YOR319W ALF1P53904 254 aa3.42□□□□□ -1.86
HSH49YOR319W CRZ1P53968 678 aa3.42□□□□□ -1.86
HSH49YOR319W ECM18Q04623 453 aa3.42□□□□□ -1.86
HSH49YOR319W ERV41Q04651 352 aa3.42□□□□□ -1.86
HSH49YOR319W PRM6Q04705 352 aa3.42□□□□□ -1.86
HSH49YOR319W LOT6Q07923 191 aa3.42□□□□□ -1.86
HSH49YOR319W YLR108CQ12259 485 aa3.42□□□□□ -1.86
HSH49YOR319W MRPL23Q12487 163 aaPredicted RBP3.42□□□□□ -1.86
HSH49YOR319W MEX67Q99257 599 aaKnown RBP3.42□□□□□ -1.86
HSH49YOR319W UGA1P17649 471 aa3.41□□□□□ -1.86
HSH49YOR319W ARF2P19146 181 aaKnown RBP3.41□□□□□ -1.86
HSH49YOR319W FAR1P21268 830 aa3.41□□□□□ -1.86
HSH49YOR319W ZUO1P32527 433 aaKnown RBP3.41□□□□□ -1.86
HSH49YOR319W YHR182WP38870 785 aa3.41□□□□□ -1.86
HSH49YOR319W SEC27P41811 889 aaKnown RBP3.41□□□□□ -1.86
HSH49YOR319W IDP2P41939 412 aa3.41□□□□□ -1.86
HSH49YOR319W YFL067WP43537 175 aa3.41□□□□□ -1.86
HSH49YOR319W NCA3P46955 337 aa3.41□□□□□ -1.86
HSH49YOR319W ABM1P47146 123 aa3.41□□□□□ -1.86
HSH49YOR319W PNC1P53184 216 aaKnown RBP3.41□□□□□ -1.86
HSH49YOR319W WSC2P53832 503 aa3.41□□□□□ -1.86
HSH49YOR319W RVB1Q03940 463 aaKnown RBP3.41□□□□□ -1.86
HSH49YOR319W APC4Q04601 652 aa3.41□□□□□ -1.86
HSH49YOR319W NAT4Q04751 285 aa3.41□□□□□ -1.86
HSH49YOR319W BUR2Q05949 395 aa3.41□□□□□ -1.86
HSH49YOR319W ESA1Q08649 445 aa3.41□□□□□ -1.86
HSH49YOR319W PPT2Q12036 173 aa3.41□□□□□ -1.86
HSH49YOR319W TIP41Q12199 356 aa3.41□□□□□ -1.86
HSH49YOR319W GDH1P07262 454 aaKnown RBP3.4□□□□□ -1.87
HSH49YOR319W RAD5P32849 1169 aaPredicted RBP3.4□□□□□ -1.87
HSH49YOR319W IST2P38250 946 aa3.4□□□□□ -1.87
HSH49YOR319W YHK8P38776 514 aa3.4□□□□□ -1.87
HSH49YOR319W SBE22P38814 852 aa3.4□□□□□ -1.87
HSH49YOR319W YHR218WP38899 603 aa3.4□□□□□ -1.87
HSH49YOR319W RBG1P39729 369 aa3.4□□□□□ -1.87
HSH49YOR319W UTP25P40498 721 aaKnown RBP3.4□□□□□ -1.87
HSH49YOR319W YIL029CP40538 142 aa3.4□□□□□ -1.87
HSH49YOR319W KEG1P43614 200 aa3.4□□□□□ -1.87
HSH49YOR319W GTO1P48239 356 aa3.4□□□□□ -1.87
HSH49YOR319W LST7P53237 242 aa3.4□□□□□ -1.87
HSH49YOR319W HER2Q03557 464 aa3.4□□□□□ -1.87
HSH49YOR319W YLH47Q06493 454 aa3.4□□□□□ -1.87
HSH49YOR319W HNT3Q08702 217 aa3.4□□□□□ -1.87
HSH49YOR319W YMR230W-AQ3E7B5 62 aa3.4□□□□□ -1.87
HSH49YOR319W YCR024C-BQ3E7Z8 88 aa3.4□□□□□ -1.87
HSH49YOR319W TRP1P00912 224 aa3.39□□□□□ -1.87
HSH49YOR319W PIS1P06197 220 aaKnown RBP3.39□□□□□ -1.87
HSH49YOR319W CAR2P07991 424 aaKnown RBP3.39□□□□□ -1.87
HSH49YOR319W RPL18AP0CX49 186 aaKnown RBP3.39□□□□□ -1.87
HSH49YOR319W RPL18BP0CX50 186 aaKnown RBP3.39□□□□□ -1.87
HSH49YOR319W PRO3P32263 286 aaKnown RBP3.39□□□□□ -1.87
HSH49YOR319W DPH5P32469 300 aaPredicted RBP3.39□□□□□ -1.87
HSH49YOR319W RPC25P35718 212 aa3.39□□□□□ -1.87
HSH49YOR319W MYO3P36006 1272 aa3.39□□□□□ -1.87
HSH49YOR319W PRM5P40476 318 aa3.39□□□□□ -1.87
HSH49YOR319W INA22P40576 216 aa3.39□□□□□ -1.87
HSH49YOR319W WWM1P43582 211 aaKnown RBP3.39□□□□□ -1.87
HSH49YOR319W TRF5P48561 642 aaKnown RBP3.39□□□□□ -1.87
HSH49YOR319W MRM2P53123 320 aa3.39□□□□□ -1.87
HSH49YOR319W YGR168CP53293 376 aa3.39□□□□□ -1.87
HSH49YOR319W YMR102CQ03177 834 aa3.39□□□□□ -1.87
HSH49YOR319W GAT3Q07928 141 aa3.39□□□□□ -1.87
HSH49YOR319W DNL4Q08387 944 aaPredicted RBP3.39□□□□□ -1.87
HSH49YOR319W EAF3Q12432 401 aa3.39□□□□□ -1.87
HSH49YOR319W PAA1Q12447 191 aaKnown RBP3.39□□□□□ -1.87
HSH49YOR319W PCL9Q12477 304 aa3.39□□□□□ -1.87
HSH49YOR319W HTZ1Q12692 134 aaKnown RBP3.39□□□□□ -1.87
HSH49YOR319W STE2D6VTK4 431 aa3.38□□□□□ -1.87
HSH49YOR319W UTR1P21373 530 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms