RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W ATP22P50273 684 aaPredicted RBP3.55□□□□□ -1.84
SSL1YLR005W GTR2P53290 341 aa3.55□□□□□ -1.84
SSL1YLR005W YLR460CP54007 376 aa3.55□□□□□ -1.84
SSL1YLR005W APM1Q00776 475 aaPredicted RBP3.55□□□□□ -1.84
SSL1YLR005W REC102Q02721 264 aa3.55□□□□□ -1.84
SSL1YLR005W IRC15Q02733 499 aa3.55□□□□□ -1.84
SSL1YLR005W YLR446WQ06204 433 aa3.55□□□□□ -1.84
SSL1YLR005W YPR091CQ06833 770 aa3.55□□□□□ -1.84
SSL1YLR005W VHS3Q08438 674 aa3.55□□□□□ -1.84
SSL1YLR005W YOR365CQ08844 703 aa3.55□□□□□ -1.84
SSL1YLR005W RCN2Q12044 265 aa3.55□□□□□ -1.84
SSL1YLR005W MHT1Q12525 324 aa3.55□□□□□ -1.84
SSL1YLR005W YOR019WQ99248 730 aa3.55□□□□□ -1.84
SSL1YLR005W FLO9P39712 1322 aa3.54□□□□□ -1.84
SSL1YLR005W CDC36P06100 191 aaPredicted RBP3.54□□□□□ -1.84
SSL1YLR005W PET111P08468 800 aa3.54□□□□□ -1.84
SSL1YLR005W HMG1P12683 1054 aa3.54□□□□□ -1.84
SSL1YLR005W STE12P13574 688 aa3.54□□□□□ -1.84
SSL1YLR005W THR1P17423 357 aaKnown RBP3.54□□□□□ -1.84
SSL1YLR005W SLM5P25345 492 aaKnown RBP3.54□□□□□ -1.84
SSL1YLR005W PBN1P25580 416 aa3.54□□□□□ -1.84
SSL1YLR005W CWH43P25618 953 aa3.54□□□□□ -1.84
SSL1YLR005W ZIP1P31111 875 aa3.54□□□□□ -1.84
SSL1YLR005W SPO23P33757 523 aa3.54□□□□□ -1.84
SSL1YLR005W DHR2P36009 735 aaPredicted RBP3.54□□□□□ -1.84
SSL1YLR005W SET3P36124 751 aa3.54□□□□□ -1.84
SSL1YLR005W LAS1P36146 502 aaPredicted RBP3.54□□□□□ -1.84
SSL1YLR005W MNN2P38069 597 aa3.54□□□□□ -1.84
SSL1YLR005W HSM3P38348 480 aa3.54□□□□□ -1.84
SSL1YLR005W ARC1P46672 376 aaKnown RBP3.54□□□□□ -1.84
SSL1YLR005W MNN5P46982 586 aa3.54□□□□□ -1.84
SSL1YLR005W AIM22P47051 409 aa3.54□□□□□ -1.84
SSL1YLR005W NOP9P47077 666 aaKnown RBP3.54□□□□□ -1.84
SSL1YLR005W EMC2P47133 292 aaKnown RBP3.54□□□□□ -1.84
SSL1YLR005W YJR096WP47137 282 aa3.54□□□□□ -1.84
SSL1YLR005W AIF1P52923 378 aa3.54□□□□□ -1.84
SSL1YLR005W YGR079WP53249 370 aa3.54□□□□□ -1.84
SSL1YLR005W BIO4P53630 237 aa3.54□□□□□ -1.84
SSL1YLR005W SLM2P53955 656 aa3.54□□□□□ -1.84
SSL1YLR005W UBX4P54730 416 aa3.54□□□□□ -1.84
SSL1YLR005W SKI8Q02793 397 aaPredicted RBP3.54□□□□□ -1.84
SSL1YLR005W ATG21Q02887 496 aa3.54□□□□□ -1.84
SSL1YLR005W PFA5Q03289 374 aa3.54□□□□□ -1.84
SSL1YLR005W CGI121Q03705 181 aaKnown RBP3.54□□□□□ -1.84
SSL1YLR005W BUD22Q04347 519 aaKnown RBP3.54□□□□□ -1.84
SSL1YLR005W PLM2Q04383 521 aa3.54□□□□□ -1.84
SSL1YLR005W SWF1Q04629 336 aa3.54□□□□□ -1.84
SSL1YLR005W SFG1Q12507 346 aa3.54□□□□□ -1.84
SSL1YLR005W MTR10Q99189 972 aa3.54□□□□□ -1.84
SSL1YLR005W RHO2P06781 192 aa3.53□□□□□ -1.84
SSL1YLR005W ILV2P07342 687 aaKnown RBP3.53□□□□□ -1.84
SSL1YLR005W YFR010W-AP0C5N0 62 aa3.53□□□□□ -1.84
SSL1YLR005W COS2P0CX12 379 aa3.53□□□□□ -1.84
SSL1YLR005W COS3P0CX13 379 aa3.53□□□□□ -1.84
SSL1YLR005W HSC82P15108 705 aaKnown RBP3.53□□□□□ -1.84
SSL1YLR005W ILV6P25605 309 aaKnown RBP3.53□□□□□ -1.84
SSL1YLR005W NFU1P32860 256 aa3.53□□□□□ -1.84
SSL1YLR005W PHO89P38361 574 aa3.53□□□□□ -1.84
SSL1YLR005W FAD1P38913 306 aa3.53□□□□□ -1.84
SSL1YLR005W CIN1P40987 1014 aa3.53□□□□□ -1.84
SSL1YLR005W COS4P43542 379 aa3.53□□□□□ -1.84
SSL1YLR005W YPT32P51996 222 aaKnown RBP3.53□□□□□ -1.84
SSL1YLR005W GOR1P53839 350 aa3.53□□□□□ -1.84
SSL1YLR005W RPM2Q02773 1202 aa3.53□□□□□ -1.84
SSL1YLR005W YPL071CQ02864 156 aa3.53□□□□□ -1.84
SSL1YLR005W EFR3Q03653 782 aaKnown RBP3.53□□□□□ -1.84
SSL1YLR005W YMR155WQ03795 547 aa3.53□□□□□ -1.84
SSL1YLR005W SMA2Q04658 369 aa3.53□□□□□ -1.84
SSL1YLR005W COQ11Q05892 277 aa3.53□□□□□ -1.84
SSL1YLR005W ATG33Q06485 197 aa3.53□□□□□ -1.84
SSL1YLR005W ATG34Q12292 412 aa3.53□□□□□ -1.84
SSL1YLR005W PRP46Q12417 451 aaPredicted RBP3.53□□□□□ -1.84
SSL1YLR005W YNL162W-AQ3E7A8 72 aa3.53□□□□□ -1.84
SSL1YLR005W DAP2P18962 818 aa3.52□□□□□ -1.85
SSL1YLR005W RPB5P20434 215 aa3.52□□□□□ -1.85
SSL1YLR005W OCA4P25366 362 aa3.52□□□□□ -1.85
SSL1YLR005W DAL3P32459 195 aa3.52□□□□□ -1.85
SSL1YLR005W TPO5P36029 618 aa3.52□□□□□ -1.85
SSL1YLR005W MAL32P38158 584 aa3.52□□□□□ -1.85
SSL1YLR005W FES1P38260 290 aa3.52□□□□□ -1.85
SSL1YLR005W GRE3P38715 327 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
SSL1YLR005W YDR089WP38966 869 aa3.52□□□□□ -1.85
SSL1YLR005W SMX2P40204 77 aaKnown RBP3.52□□□□□ -1.85
SSL1YLR005W SOK1P40317 901 aa3.52□□□□□ -1.85
SSL1YLR005W LIA1P47120 325 aaKnown RBP3.52□□□□□ -1.85
SSL1YLR005W RPS12P48589 143 aaKnown RBP3.52□□□□□ -1.85
SSL1YLR005W NAS6P50086 228 aa3.52□□□□□ -1.85
SSL1YLR005W HOS2P53096 452 aaPredicted RBP3.52□□□□□ -1.85
SSL1YLR005W IDP3P53982 420 aaKnown RBP3.52□□□□□ -1.85
SSL1YLR005W VPS60Q03390 229 aa3.52□□□□□ -1.85
SSL1YLR005W HMO1Q03973 246 aaKnown RBP3.52□□□□□ -1.85
SSL1YLR005W ECM11Q04110 302 aa3.52□□□□□ -1.85
SSL1YLR005W HFD1Q04458 532 aa3.52□□□□□ -1.85
SSL1YLR005W DCR2Q05924 578 aa3.52□□□□□ -1.85
SSL1YLR005W GAS2Q06135 555 aa3.52□□□□□ -1.85
SSL1YLR005W GMC2Q06201 188 aa3.52□□□□□ -1.85
SSL1YLR005W YLL007CQ07799 665 aa3.52□□□□□ -1.85
SSL1YLR005W GPN2Q08726 347 aaPredicted RBP3.52□□□□□ -1.85
SSL1YLR005W FDH1Q08911 376 aa3.52□□□□□ -1.85
SSL1YLR005W YLR053CQ12026 108 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms