RNA–Protein interactions for RNA: YDR002W

YRB1, Transcript of Ran GTPase binding protein, yeast

Gene YRB1, Length 606 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YRB1	YDR002W	YCL002C	P25565	263 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	PDB1	P32473	366 aa	Known RBP	2.22	□□□□□ -2.05
YRB1	YDR002W	PRP21	P32524	280 aa	Predicted RBP	2.22	□□□□□ -2.05
YRB1	YDR002W	TCA17	P32613	152 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	RAD23	P32628	398 aa	Known RBP	2.22	□□□□□ -2.05
YRB1	YDR002W	RAD24	P32641	659 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	RPC34	P32910	317 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	RPF2	P36160	344 aa	Known RBP	2.22	□□□□□ -2.05
YRB1	YDR002W	RIB1	P38066	345 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	LDB7	P38210	180 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	ZTA1	P38230	334 aa	Known RBP	2.22	□□□□□ -2.05
YRB1	YDR002W	MMS21	P38632	267 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	YHR033W	P38690	423 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	TRM5	P38793	499 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	PFS1	P38872	237 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	LNP1	P38878	278 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	YHR210C	P38893	341 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	SRP14	P38985	146 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	CCT6	P39079	546 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	SEO1	P39709	593 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	POG1	P40473	351 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	HXT9	P40885	567 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	IDS2	P46958	469 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	YJL118W	P47022	219 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	DPB11	P47027	764 aa	Predicted RBP	2.22	□□□□□ -2.05
YRB1	YDR002W	AIM22	P47051	409 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	YJR149W	P47177	404 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	COS5	P47187	383 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	YPT11	P48559	417 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	YIP5	P53108	310 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	PEF1	P53238	335 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	RCF2	P53721	224 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	HXT11	P54862	567 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	MFM1	Q02783	413 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	YPL108W	Q02872	168 aa	Predicted RBP	2.22	□□□□□ -2.05
YRB1	YDR002W	TAF12	Q03761	539 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	EKI1	Q03764	534 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	ARO80	Q04052	950 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	EMI2	Q04409	500 aa	Known RBP	2.22	□□□□□ -2.05
YRB1	YDR002W	FAR8	Q05040	523 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	CDC123	Q05791	360 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	MRPL35	Q06678	367 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	VPS36	Q06696	566 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	THI3	Q07471	609 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	DTD1	Q07648	150 aa	Known RBP	2.22	□□□□□ -2.05
YRB1	YDR002W	COS7	Q07788	383 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	GRE1	Q08969	168 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	SLF1	Q12034	447 aa	Known RBP	2.22	□□□□□ -2.05
YRB1	YDR002W	DAS2	Q12084	232 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	ATG9	Q12142	997 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	YOR029W	Q12243	111 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	SNF8	Q12483	233 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	Q0142	Q9ZZW4	58 aa		2.22	□□□□□ -2.05
YRB1	YDR002W	THP2	O13539	261 aa	Known RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	YBR085C-A	O43137	85 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	CAR1	P00812	333 aa	Known RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	HTB1	P02293	131 aa	Known RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	HTB2	P02294	131 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	ERG20	P08524	352 aa	Known RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	RPS16A	P0CX51	143 aa	Known RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	RPS16B	P0CX52	143 aa	Known RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	NHP6A	P11632	93 aa	Known RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	FRS1	P15624	595 aa	Known RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	PDA1	P16387	420 aa	Known RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	ARG1	P22768	420 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	MGR1	P25573	417 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	HSP30	P25619	332 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	CSM1	P25651	190 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	RPS5	P26783	225 aa	Known RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	2.21	□□□□□ -2.06	not detected
YRB1	YDR002W	CAM1	P29547	415 aa	Known RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	YPS1	P32329	569 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	ECM25	P32525	599 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	WBP1	P33767	430 aa	Known RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	CBT1	P36038	271 aa	Predicted RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	TCD2	P36101	447 aa	Known RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	DRE2	P36152	348 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	OLA1	P38219	394 aa	Known RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	ECM8	P38246	354 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	IML3	P38265	245 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	MED8	P38304	223 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	URA8	P38627	578 aa	Predicted RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	STB5	P38699	743 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	STP2	P38704	541 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	CYC2	P38909	366 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	ALP1	P38971	573 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	FET3	P38993	636 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	CCT2	P39076	527 aa	Known RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	YJL193W	P39542	402 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	YER121W	P40076	114 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	VFA1	P40080	203 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	VRG4	P40107	337 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	VHS2	P40463	436 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	YKE4	P40544	346 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	CDC40	P40968	455 aa	Predicted RBP	2.21	□□□□□ -2.06
YRB1	YDR002W	GSM1	P42950	618 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	IRC7	P43623	340 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.21	□□□□□ -2.06	not detected
YRB1	YDR002W	YAR1	P46683	200 aa		2.21	□□□□□ -2.06
YRB1	YDR002W	CTK2	P46962	323 aa		2.21	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 71.7 ms