RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W FUR1P18562 216 aaKnown RBP2.11□□□□□ -2.07
MCD1YDL003W MRPL44P19956 98 aa2.11□□□□□ -2.07
MCD1YDL003W AEP2P22136 580 aa2.11□□□□□ -2.07
MCD1YDL003W IFM1P25038 676 aa2.11□□□□□ -2.07
MCD1YDL003W CNB1P25296 175 aa2.11□□□□□ -2.07
MCD1YDL003W PUP3P25451 205 aaKnown RBP2.11□□□□□ -2.07
MCD1YDL003W DCC1P25559 380 aa2.11□□□□□ -2.07
MCD1YDL003W URA7P28274 579 aaKnown RBP2.11□□□□□ -2.07
MCD1YDL003W YOX1P34161 385 aa2.11□□□□□ -2.07
MCD1YDL003W YBR056WP38081 501 aa2.11□□□□□ -2.07
MCD1YDL003W FTH1P38310 465 aa2.11□□□□□ -2.07
MCD1YDL003W MSR1P38714 643 aa2.11□□□□□ -2.07
MCD1YDL003W FMP10P40098 244 aa2.11□□□□□ -2.07
MCD1YDL003W PGD1P40356 397 aa2.11□□□□□ -2.07
MCD1YDL003W AGP3P43548 558 aa2.11□□□□□ -2.07
MCD1YDL003W ROK1P45818 564 aaPredicted RBP2.11□□□□□ -2.07
MCD1YDL003W ART5P53244 586 aaKnown RBP2.11□□□□□ -2.07
MCD1YDL003W YPL107WQ02873 248 aa2.11□□□□□ -2.07
MCD1YDL003W YDR541CQ03049 344 aa2.11□□□□□ -2.07
MCD1YDL003W AIM36Q03798 255 aa2.11□□□□□ -2.07
MCD1YDL003W RUB1Q03919 77 aa2.11□□□□□ -2.07
MCD1YDL003W SWF1Q04629 336 aa2.11□□□□□ -2.07
MCD1YDL003W MFB1Q04922 465 aa2.11□□□□□ -2.07
MCD1YDL003W BCH1Q05029 724 aa2.11□□□□□ -2.07
MCD1YDL003W VID22Q05934 901 aa2.11□□□□□ -2.07
MCD1YDL003W UTP21Q06078 939 aaPredicted RBP2.11□□□□□ -2.07
MCD1YDL003W GAS2Q06135 555 aa2.11□□□□□ -2.07
MCD1YDL003W SPH1Q06160 661 aa2.11□□□□□ -2.07
MCD1YDL003W MHR1Q06630 226 aa2.11□□□□□ -2.07
MCD1YDL003W THI73Q07904 523 aa2.11□□□□□ -2.07
MCD1YDL003W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
MCD1YDL003W REX3Q12090 404 aa2.11□□□□□ -2.07
MCD1YDL003W YPR022CQ12139 1133 aa2.11□□□□□ -2.07
MCD1YDL003W RBD2Q12270 262 aa2.11□□□□□ -2.07
MCD1YDL003W YOR019WQ99248 730 aa2.11□□□□□ -2.07
MCD1YDL003W YRF1-2P40105 1681 aa2.11□□□□□ -2.07
MCD1YDL003W THP2O13539 261 aaKnown RBP2.11□□□□□ -2.07
MCD1YDL003W YPT1P01123 206 aaKnown RBP2.11□□□□□ -2.07
MCD1YDL003W REP2P03872 296 aa2.11□□□□□ -2.07
MCD1YDL003W ARG3P05150 338 aa2.11□□□□□ -2.07
MCD1YDL003W CDC7P06243 507 aa2.11□□□□□ -2.07
MCD1YDL003W TPK1P06244 397 aa2.11□□□□□ -2.07
MCD1YDL003W CDC33P07260 213 aaKnown RBP2.11□□□□□ -2.07
MCD1YDL003W SEC53P07283 254 aaKnown RBP2.11□□□□□ -2.07
MCD1YDL003W RPL3P14126 387 aaKnown RBP2.11□□□□□ -2.07
MCD1YDL003W GLK1P17709 500 aaKnown RBP2.11□□□□□ -2.07
MCD1YDL003W PRP2P20095 876 aaPredicted RBP2.11□□□□□ -2.07
MCD1YDL003W AMD2P22580 549 aa2.11□□□□□ -2.07
MCD1YDL003W PGS1P25578 521 aa2.11□□□□□ -2.07
MCD1YDL003W YCR101CP25607 182 aa2.11□□□□□ -2.07
MCD1YDL003W ERG9P29704 444 aa2.11□□□□□ -2.07
MCD1YDL003W RNP1P32385 249 aa2.11□□□□□ -2.07
MCD1YDL003W KRE6P32486 720 aa2.11□□□□□ -2.07
MCD1YDL003W FRE1P32791 686 aa2.11□□□□□ -2.07
MCD1YDL003W PDC2P32896 925 aa2.11□□□□□ -2.07
MCD1YDL003W MRPL15P36523 253 aa2.11□□□□□ -2.07
MCD1YDL003W PEX32P38292 413 aa2.11□□□□□ -2.07
MCD1YDL003W PHO89P38361 574 aa2.11□□□□□ -2.07
MCD1YDL003W STB5P38699 743 aa2.11□□□□□ -2.07
MCD1YDL003W ARN2P38724 620 aa2.11□□□□□ -2.07
MCD1YDL003W NSG1P38837 291 aa2.11□□□□□ -2.07
MCD1YDL003W VPS45P38932 577 aa2.11□□□□□ -2.07
MCD1YDL003W UIP3P39547 235 aa2.11□□□□□ -2.07
MCD1YDL003W RBG1P39729 369 aa2.11□□□□□ -2.07
MCD1YDL003W YMR144WP40214 342 aaKnown RBP2.11□□□□□ -2.07
MCD1YDL003W PEP8P40335 379 aa2.11□□□□□ -2.07
MCD1YDL003W IDP2P41939 412 aa2.11□□□□□ -2.07
MCD1YDL003W GSM1P42950 618 aa2.11□□□□□ -2.07
MCD1YDL003W LOC1P43586 204 aaPredicted RBP2.11□□□□□ -2.07
MCD1YDL003W GUF1P46943 645 aa2.11□□□□□ -2.07
MCD1YDL003W IDS2P46958 469 aa2.11□□□□□ -2.07
MCD1YDL003W RPA34P47006 233 aaPredicted RBP2.11□□□□□ -2.07
MCD1YDL003W GTO1P48239 356 aa2.11□□□□□ -2.07
MCD1YDL003W BIO3P50277 480 aa2.11□□□□□ -2.07
MCD1YDL003W FMP48P53233 369 aa2.11□□□□□ -2.07
MCD1YDL003W RSM27P53305 110 aa2.11□□□□□ -2.07
MCD1YDL003W YNR062CP53748 327 aa2.11□□□□□ -2.07
MCD1YDL003W HCH1P53834 153 aa2.11□□□□□ -2.07
MCD1YDL003W NOP13P53883 403 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
MCD1YDL003W CBK1P53894 756 aa2.11□□□□□ -2.07
MCD1YDL003W SLM2P53955 656 aa2.11□□□□□ -2.07
MCD1YDL003W YAT1P80235 687 aa2.11□□□□□ -2.07
MCD1YDL003W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
MCD1YDL003W MTD1Q02046 320 aaKnown RBP2.11□□□□□ -2.07
MCD1YDL003W NUP49Q02199 472 aa2.11□□□□□ -2.07
MCD1YDL003W PEX25Q02969 394 aa2.11□□□□□ -2.07
MCD1YDL003W PRM15Q03262 622 aa2.11□□□□□ -2.07
MCD1YDL003W PFA5Q03289 374 aa2.11□□□□□ -2.07
MCD1YDL003W YML037CQ03703 340 aa2.11□□□□□ -2.07
MCD1YDL003W SND1Q04007 877 aa2.11□□□□□ -2.07
MCD1YDL003W PEX12Q04370 399 aa2.11□□□□□ -2.07
MCD1YDL003W YLR283WQ05867 314 aa2.11□□□□□ -2.07
MCD1YDL003W ECM38Q05902 660 aaPredicted RBP2.11□□□□□ -2.07
MCD1YDL003W ECM22Q05958 814 aaPredicted RBP2.11□□□□□ -2.07
MCD1YDL003W ASR1Q06834 288 aa2.11□□□□□ -2.07
MCD1YDL003W YPL272CQ08984 517 aa2.11□□□□□ -2.07
MCD1YDL003W YPR063CQ12160 140 aa2.11□□□□□ -2.07
MCD1YDL003W TRM10Q12400 293 aa2.11□□□□□ -2.07
MCD1YDL003W SET6Q12529 373 aa2.11□□□□□ -2.07
MCD1YDL003W SRN2Q99176 213 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 315.2 ms