RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 NOP56O00567 594 aaKnown RBP9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 BUB1BO60566 1050 aaPredicted RBP9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 EYA4O95677 639 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 DCAF15Q66K64 600 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 SEPT12Q8IYM1 358 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 CCDC89Q8N998 374 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 CCDC63Q8NA47 563 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 MRRFQ96E11 262 aaKnown RBP9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 PNKPQ96T60 521 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 FAM205AQ6ZU69 1335 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 PITPNM2Q9BZ72 1349 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 A0A087X0B3 334 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 SLC16A3O15427 465 aaKnown RBP9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 KLK7P49862 253 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 PAPD7Q5XG87 772 aaKnown RBP9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 SMIM5Q71RC9 77 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 CCDC13Q8IYE1 715 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 PAF1Q8N7H5 531 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 BAIAP2L1Q9UHR4 511 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 L1RE1Q9UN81 338 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 FAM196BA6NMK8 535 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 POLD1P28340 1107 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 APBB1IPQ7Z5R6 666 aaPredicted RBP9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 TADA2BQ86TJ2 420 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 ACTR5Q9H9F9 607 aaPredicted RBP9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.29□□□□□ -0.921e-6■□□□□ 10.4
HNRNPU-219ENST00000639628 GJA3Q9Y6H8 435 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 FAM169AQ9Y6X4 670 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 LRRC10BA6NIK2 292 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 RGL2O15211 777 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 IFNB1P01574 187 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 BMP6P22004 513 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 POLGP54098 1239 aaPredicted RBP9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 SNX16P57768 344 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 SF3A3Q12874 501 aaKnown RBP eCLIP9.29□□□□□ -0.928e-7■■■□□ 16.5
HNRNPU-219ENST00000639628 DRAP1Q14919 205 aaPredicted RBP9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 PPP2R5AQ15172 486 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 RFFLQ8WZ73 363 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 DYDC2Q96IM9 177 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 EIF2AK1Q9BQI3 630 aaKnown RBP9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 JMJD4Q9H9V9 463 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 TXNDC16Q9P2K2 825 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 PACSIN2Q9UNF0 486 aaPredicted RBP9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 ATF7P17544 494 aaPredicted RBP9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 PHBP35232 272 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 PIK3CAP42336 1068 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 RWDD2BP57060 319 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 ADCY2Q08462 1091 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 SLC27A3Q5K4L6 730 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 C6orf118Q5T5N4 469 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 XXYLT1Q8NBI6 393 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 ATP6V1G3Q96LB4 118 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 DDX47Q9H0S4 455 aaKnown RBP9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 QTRT2Q9H974 415 aaKnown RBP9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 NYAP2Q9P242 653 aa9.29□□□□□ -0.92
HNRNPU-219ENST00000639628 NALCNQ8IZF0 1738 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 RASGRF2O14827 1237 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 SUN1O94901 812 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 MMP10P09238 476 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 SLC8A1P32418 973 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 IRX3P78415 501 aaPredicted RBP9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 GRB10Q13322 594 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 VPS72Q15906 364 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 HADHQ16836 314 aaKnown RBP9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 MUM1L1Q5H9M0 696 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 LGSNQ5TDP6 509 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 PADI6Q6TGC4 694 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 KRT27Q7Z3Y8 459 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 LRRN4CLQ8ND94 238 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 CDHR1Q96JP9 859 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 CEP170P1Q96L14 293 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 TUFT1Q9NNX1 390 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 ZNF148Q9UQR1 794 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 NOC2LQ9Y3T9 749 aaKnown RBP9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 RGPD8O14715 1765 aaPredicted RBP9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 LRRIQ4A6NIV6 560 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 UCHL3P15374 230 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 PRLRP16471 622 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 POLR2BP30876 1174 aaKnown RBP9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 SOX5P35711 763 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 RASSF2P50749 326 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 GPC5P78333 572 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 E2F4Q16254 413 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 CENPPQ6IPU0 288 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 HHIPL2Q6UWX4 724 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 KCTD17Q8N5Z5 321 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 MRPL47Q9HD33 250 aaKnown RBP9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 HGSO14964 777 aaPredicted RBP9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 STAMBPO95630 424 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 ASNSP08243 561 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 IFNAR2P48551 515 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 SRLQ86TD4 932 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 ZBTB8OSQ8IWT0 167 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 INTS2Q9H0H0 1204 aaKnown RBP9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 TDRD3Q9H7E2 651 aaKnown RBP9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 SUGCTQ9HAC7 445 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 INTS13Q9NVM9 706 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 MRC1P22897 1456 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 KRT19P08727 400 aa9.28□□□□□ -0.92
HNRNPU-219ENST00000639628 NAA25Q14CX7 972 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 176.1 ms