RNA–Protein interactions for RNA: ENST00000638237.1

NECAP1-210, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NECAP1, Length 2,517 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-210ENST00000638237 FBXO11Q86XK2 927 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 ETNPPLQ8TBG4 499 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 SCFD1Q8WVM8 642 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 CRYGNQ8WXF5 182 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 IFT81Q8WYA0 676 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.48□□□□□ -0.892e-6■■■■■ 29
NECAP1-210ENST00000638237 SYN2Q92777 582 aaPredicted RBP9.48□□□□□ -0.89
NECAP1-210ENST00000638237 ATP6V1G3Q96LB4 118 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 NUCKS1Q9H1E3 243 aaKnown RBP9.48□□□□□ -0.89
NECAP1-210ENST00000638237 IKZF4Q9H2S9 585 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 SERPINA10Q9UK55 444 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 ATAD5Q96QE3 1844 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 ESYT3A0FGR9 886 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 ZSCAN5CA6NGD5 496 aaPredicted RBP9.48□□□□□ -0.89
NECAP1-210ENST00000638237 SPDYE3A6NKU9 549 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 HMGB1P1B2RPK0 211 aaPredicted RBP9.48□□□□□ -0.89
NECAP1-210ENST00000638237 KRT18P05783 430 aaKnown RBP9.48□□□□□ -0.89
NECAP1-210ENST00000638237 BMP3P12645 472 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 POLD1P28340 1107 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 HOXA7P31268 230 aaPredicted RBP9.48□□□□□ -0.89
NECAP1-210ENST00000638237 KCNMA1Q12791 1236 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 PTGISQ16647 500 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 CCDC40Q4G0X9 1142 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 FOXR2Q6PJQ5 311 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 MIGA2Q7L4E1 593 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 CACNA2D4Q7Z3S7 1137 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 C7orf43Q8WVR3 580 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 LUC7LQ9NQ29 371 aaKnown RBP9.48□□□□□ -0.89
NECAP1-210ENST00000638237 RGL1Q9NZL6 768 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 PRR12Q9ULL5 1215 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 PCDHA2Q9Y5H9 948 aa9.48□□□□□ -0.89
NECAP1-210ENST00000638237 KDM3AQ9Y4C1 1321 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 H0YHG0 523 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 ZBTB39O15060 712 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 CHMP2AO43633 222 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 PALMO75781 387 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 CFBP00751 764 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 MDH1P40925 334 aaKnown RBP9.47□□□□□ -0.89
NECAP1-210ENST00000638237 SLC12A3P55017 1021 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 EN1Q05925 392 aaPredicted RBP9.47□□□□□ -0.89
NECAP1-210ENST00000638237 NAB2Q15742 525 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 SLC9C1Q4G0N8 1177 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 FAM83BQ5T0W9 1011 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 RBM26Q5T8P6 1007 aaKnown RBP9.47□□□□□ -0.89
NECAP1-210ENST00000638237 CCDC174Q6PII3 467 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 EIF1ADQ8N9N8 165 aaKnown RBP9.47□□□□□ -0.89
NECAP1-210ENST00000638237 ZNF473Q8WTR7 871 aaKnown RBP9.47□□□□□ -0.89
NECAP1-210ENST00000638237 CASKIN2Q8WXE0 1202 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 GLIS2Q9BZE0 524 aaPredicted RBP9.47□□□□□ -0.89
NECAP1-210ENST00000638237 NT5C3AQ9H0P0 336 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.47□□□□□ -0.89
NECAP1-210ENST00000638237 A1CFQ9NQ94 594 aaKnown RBP9.47□□□□□ -0.89
NECAP1-210ENST00000638237 PCDHGC5Q9Y5F6 944 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 SFI1A8K8P3 1242 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 MYO1FO00160 1098 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 EML1O00423 815 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 MSH4O15457 936 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 FAM107AO95990 144 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 SERPING1P05155 500 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 SPATA31C1P0DKV0 1188 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 HSPA9P38646 679 aaKnown RBP9.47□□□□□ -0.89
NECAP1-210ENST00000638237 GUCY2FP51841 1108 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 SETQ01105 290 aaPredicted RBP9.47□□□□□ -0.89
NECAP1-210ENST00000638237 ARID5AQ03989 594 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 KCNA1Q09470 495 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 ITGB3BPQ13352 177 aaPredicted RBP9.47□□□□□ -0.89
NECAP1-210ENST00000638237 TDRD12Q587J7 1177 aaKnown RBP9.47□□□□□ -0.89
NECAP1-210ENST00000638237 HYIQ5T013 277 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 STYK1Q6J9G0 422 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 MYCBPAPQ8TBZ2 947 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 PIGOQ8TEQ8 1089 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 INPP4AQ96PE3 977 aaPredicted RBP9.47□□□□□ -0.89
NECAP1-210ENST00000638237 CCT8L2Q96SF2 557 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 REEP2Q9BRK0 252 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 VEZTQ9HBM0 779 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 FBXO28Q9NVF7 368 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 CEP72Q9P209 647 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 COL4A3BPQ9Y5P4 624 aa9.47□□□□□ -0.89
NECAP1-210ENST00000638237 FER1L6Q2WGJ9 1857 aa9.46□□□□□ -0.89
NECAP1-210ENST00000638237 ATRNL1Q5VV63 1379 aa9.46□□□□□ -0.89
NECAP1-210ENST00000638237 FAM170AA1A519 330 aa9.46□□□□□ -0.89
NECAP1-210ENST00000638237 MYBP10242 640 aa9.46□□□□□ -0.89
NECAP1-210ENST00000638237 USP11P51784 963 aa9.46□□□□□ -0.89
NECAP1-210ENST00000638237 STAT2P52630 851 aa9.46□□□□□ -0.89
NECAP1-210ENST00000638237 FKBP3Q00688 224 aaKnown RBP9.46□□□□□ -0.89
NECAP1-210ENST00000638237 PLCB4Q15147 1175 aa9.46□□□□□ -0.89
NECAP1-210ENST00000638237 MEI1Q5TIA1 1274 aa9.46□□□□□ -0.89
NECAP1-210ENST00000638237 NLRP14Q86W24 1093 aa9.46□□□□□ -0.89
NECAP1-210ENST00000638237 SFR1Q86XK3 245 aa9.46□□□□□ -0.89
NECAP1-210ENST00000638237 FLAD1Q8NFF5 587 aa9.46□□□□□ -0.89
NECAP1-210ENST00000638237 KRT12Q99456 494 aa9.46□□□□□ -0.89
NECAP1-210ENST00000638237 TSG101Q99816 390 aa9.46□□□□□ -0.89
NECAP1-210ENST00000638237 TMEM39BQ9GZU3 492 aa9.46□□□□□ -0.89
NECAP1-210ENST00000638237 KCTD10Q9H3F6 313 aa9.46□□□□□ -0.89
NECAP1-210ENST00000638237 ZNF277Q9NRM2 450 aaPredicted RBP9.46□□□□□ -0.89
NECAP1-210ENST00000638237 EMILIN3Q9NT22 766 aa9.46□□□□□ -0.89
NECAP1-210ENST00000638237 LOC102724159A0A0B4J2E5 919 aa9.46□□□□□ -0.9
NECAP1-210ENST00000638237 TLR2O60603 784 aa9.46□□□□□ -0.9
NECAP1-210ENST00000638237 NOL4O94818 638 aa9.46□□□□□ -0.9
NECAP1-210ENST00000638237 SREBF1P36956 1147 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms