RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 TNPO3Q9Y5L0 923 aaKnown RBP4.84□□□□□ -1.63
SRP54-214ENST00000630962 PPP1R12AO14974 1030 aaPredicted RBP4.83□□□□□ -1.64
SRP54-214ENST00000630962 GAS7O60861 476 aa4.83□□□□□ -1.64
SRP54-214ENST00000630962 DNAJC8O75937 253 aaPredicted RBP4.83□□□□□ -1.64
SRP54-214ENST00000630962 HMGCRP04035 888 aa4.83□□□□□ -1.64
SRP54-214ENST00000630962 MMEP08473 750 aa4.83□□□□□ -1.64
SRP54-214ENST00000630962 ZBTB48P10074 688 aaPredicted RBP4.83□□□□□ -1.64
SRP54-214ENST00000630962 POU3F2P20265 443 aaPredicted RBP4.83□□□□□ -1.64
SRP54-214ENST00000630962 IL13RA1P78552 427 aa4.83□□□□□ -1.64
SRP54-214ENST00000630962 EIF4HQ15056 248 aaKnown RBP4.83□□□□□ -1.64
SRP54-214ENST00000630962 PIK3R6Q5UE93 754 aa4.83□□□□□ -1.64
SRP54-214ENST00000630962 CPZQ66K79 652 aa4.83□□□□□ -1.64
SRP54-214ENST00000630962 GRAMD4Q6IC98 578 aa4.83□□□□□ -1.64
SRP54-214ENST00000630962 ABHD17CQ6PCB6 329 aa4.83□□□□□ -1.64
SRP54-214ENST00000630962 OTOP2Q7RTS6 562 aa4.83□□□□□ -1.64
SRP54-214ENST00000630962 LOXL4Q96JB6 756 aa4.83□□□□□ -1.64
SRP54-214ENST00000630962 TMX1Q9H3N1 280 aa4.83□□□□□ -1.64
SRP54-214ENST00000630962 FANCLQ9NW38 375 aa4.83□□□□□ -1.64
SRP54-214ENST00000630962 IFT57Q9NWB7 429 aa4.83□□□□□ -1.64
SRP54-214ENST00000630962 UCKL1Q9NWZ5 548 aa4.83□□□□□ -1.64
SRP54-214ENST00000630962 PTPDC1A2A3K4 754 aa4.82□□□□□ -1.64
SRP54-214ENST00000630962 PRAMEF22A3QJZ6 481 aa4.82□□□□□ -1.64
SRP54-214ENST00000630962 CBX4O00257 560 aa4.82□□□□□ -1.64
SRP54-214ENST00000630962 KCNK3O14649 394 aa4.82□□□□□ -1.64
SRP54-214ENST00000630962 GLRX3O76003 335 aaKnown RBP4.82□□□□□ -1.64
SRP54-214ENST00000630962 CLSTN1O94985 981 aa4.82□□□□□ -1.64
SRP54-214ENST00000630962 JMJD7P0C870 316 aa4.82□□□□□ -1.64
SRP54-214ENST00000630962 KIF11P52732 1056 aa4.82□□□□□ -1.64
SRP54-214ENST00000630962 RAC3P60763 192 aa4.82□□□□□ -1.64
SRP54-214ENST00000630962 ALDH6A1Q02252 535 aaKnown RBP4.82□□□□□ -1.64
SRP54-214ENST00000630962 SART3Q15020 963 aaKnown RBP4.82□□□□□ -1.64
SRP54-214ENST00000630962 EPHA7Q15375 998 aa4.82□□□□□ -1.64
SRP54-214ENST00000630962 CDCA2Q69YH5 1023 aaPredicted RBP4.82□□□□□ -1.64
SRP54-214ENST00000630962 TMEM200BQ69YZ2 307 aa4.82□□□□□ -1.64
SRP54-214ENST00000630962 RPGRQ92834 1020 aaKnown RBP4.82□□□□□ -1.64
SRP54-214ENST00000630962 GPR20Q99678 358 aa4.82□□□□□ -1.64
SRP54-214ENST00000630962 C1QTNF3Q9BXJ4 246 aa4.82□□□□□ -1.64
SRP54-214ENST00000630962 PIF1Q9H611 641 aa4.82□□□□□ -1.64
SRP54-214ENST00000630962 UBA6A0AVT1 1052 aaPredicted RBP4.81□□□□□ -1.64
SRP54-214ENST00000630962 PMS2P1A4D2B8 440 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 ENPP3O14638 875 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 BUD31P41223 144 aaPredicted RBP4.81□□□□□ -1.64
SRP54-214ENST00000630962 NEK4P51957 841 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 BCAR1P56945 870 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 NFYCQ13952 458 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 SEC23AQ15436 765 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 TTC38Q5R3I4 469 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 CATSPEREQ5SY80 951 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 PHF19Q5T6S3 580 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 KANK2Q63ZY3 851 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 TIGD7Q6NT04 549 aaPredicted RBP4.81□□□□□ -1.64
SRP54-214ENST00000630962 NIM1KQ8IY84 436 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 RTKN2Q8IZC4 609 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 GFM2Q969S9 779 aaKnown RBP4.81□□□□□ -1.64
SRP54-214ENST00000630962 MAML3Q96JK9 1138 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 LMF1Q96S06 567 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 AMNQ9BXJ7 453 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 SLKQ9H2G2 1235 aaPredicted RBP4.81□□□□□ -1.64
SRP54-214ENST00000630962 PPP4R1LQ9P1A2 415 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 SYNPO2Q9UMS6 1093 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 TCAF1Q9Y4C2 921 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 SPO11Q9Y5K1 396 aa4.81□□□□□ -1.64
SRP54-214ENST00000630962 TRAF5O00463 557 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 H2AFYO75367 372 aaKnown RBP4.8□□□□□ -1.64
SRP54-214ENST00000630962 KRT37O76014 449 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 MPIG6BO95866 241 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 MC4RP32245 332 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 RPS19P39019 145 aaKnown RBP4.8□□□□□ -1.64
SRP54-214ENST00000630962 SCNN1BP51168 640 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 MOGSQ13724 837 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 TRIM68Q6AZZ1 485 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 USP30Q70CQ3 517 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 LRRTM3Q86VH5 581 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 PHYKPLQ8IUZ5 450 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 KIAA1958Q8N8K9 716 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 DVL3Q92997 716 aaPredicted RBP4.8□□□□□ -1.64
SRP54-214ENST00000630962 MFSD3Q96ES6 412 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 SSBP3Q9BWW4 388 aaPredicted RBP4.8□□□□□ -1.64
SRP54-214ENST00000630962 KRTAP4-7Q9BYR0 210 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 OR10A2Q9H208 303 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 KCMF1Q9P0J7 381 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 USP36Q9P275 1121 aaKnown RBP4.8□□□□□ -1.64
SRP54-214ENST00000630962 USP35Q9P2H5 1018 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 PUF60Q9UHX1 559 aaKnown RBP4.8□□□□□ -1.64
SRP54-214ENST00000630962 MYRFQ9Y2G1 1151 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 TMA7Q9Y2S6 64 aaKnown RBP4.8□□□□□ -1.64
SRP54-214ENST00000630962 CD2APQ9Y5K6 639 aa4.8□□□□□ -1.64
SRP54-214ENST00000630962 C1QTNF3-AMACRE9PGA6 284 aa4.79□□□□□ -1.64
SRP54-214ENST00000630962 ARHGAP6O43182 974 aa4.79□□□□□ -1.64
SRP54-214ENST00000630962 CNOT4O95628 575 aaKnown RBP4.79□□□□□ -1.64
SRP54-214ENST00000630962 F2P00734 622 aa4.79□□□□□ -1.64
SRP54-214ENST00000630962 SDSP20132 328 aa4.79□□□□□ -1.64
SRP54-214ENST00000630962 CD40P25942 277 aa4.79□□□□□ -1.64
SRP54-214ENST00000630962 KCNQ1P51787 676 aa4.79□□□□□ -1.64
SRP54-214ENST00000630962 CD83Q01151 205 aa4.79□□□□□ -1.64
SRP54-214ENST00000630962 ZNF460Q14592 562 aa4.79□□□□□ -1.64
SRP54-214ENST00000630962 DGKDQ16760 1214 aa4.79□□□□□ -1.64
SRP54-214ENST00000630962 SLFN12LQ6IEE8 588 aa4.79□□□□□ -1.64
SRP54-214ENST00000630962 KIAA0907Q7Z7F0 614 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms