RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 ADGRG1Q9Y653 693 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 GOLGA6L9A6NEM1 432 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 ECM2O94769 699 aaPredicted RBP10.92□□□□□ -0.66
VTA1-205ENST00000620996 CCNE2O96020 404 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 STXBP4Q6ZWJ1 553 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 NIPA1Q7RTP0 329 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 KIAA1328Q86T90 577 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 VSIG10LQ86VR7 867 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 NEK9Q8TD19 979 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 CEP63Q96MT8 703 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 EPHB6O15197 1021 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 GNA14O95837 355 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 EPB41P11171 864 aaKnown RBP10.92□□□□□ -0.66
VTA1-205ENST00000620996 RPL13P26373 211 aaKnown RBP10.92□□□□□ -0.66
VTA1-205ENST00000620996 KRT76Q01546 638 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 APBA1Q02410 837 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 FRMPD4Q14CM0 1322 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 GNPTABQ3T906 1256 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.92□□□□□ -0.66
VTA1-205ENST00000620996 HS2ST1Q7LGA3 356 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 OPTNQ96CV9 577 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 GPRC5CQ9NQ84 441 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 BTBD7Q9P203 1132 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 CCDC169A6NNP5 214 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 KIF5CO60282 957 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 JAK3P52333 1124 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 ZBED6P86452 979 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 TDRD12Q587J7 1177 aaKnown RBP10.92□□□□□ -0.66
VTA1-205ENST00000620996 SWSAP1Q6NVH7 229 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 TYW1Q9NV66 732 aaKnown RBP10.92□□□□□ -0.66
VTA1-205ENST00000620996 TFR2Q9UP52 801 aa10.92□□□□□ -0.66
VTA1-205ENST00000620996 POTEB2H3BUK9 544 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 HOXA7P31268 230 aaPredicted RBP10.91□□□□□ -0.66
VTA1-205ENST00000620996 CASP4P49662 377 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 PSMC5P62195 406 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 ZNF569Q5MCW4 686 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 PPP4R3CPQ6ZMV5 832 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 ERO1BQ86YB8 467 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 SEPT9Q9UHD8 586 aaPredicted RBP10.91□□□□□ -0.66
VTA1-205ENST00000620996 GUCA1BQ9UMX6 200 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 EPN1Q9Y6I3 576 aaPredicted RBP10.91□□□□□ -0.66
VTA1-205ENST00000620996 PHIPQ8WWQ0 1821 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 XRCC5P13010 732 aaKnown RBP10.91□□□□□ -0.66
VTA1-205ENST00000620996 HOXD13P35453 343 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 KCNH2Q12809 1159 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 NAA30Q147X3 362 aaPredicted RBP10.91□□□□□ -0.66
VTA1-205ENST00000620996 EDRF1Q3B7T1 1238 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 MAP1SQ66K74 1059 aaPredicted RBP10.91□□□□□ -0.66
VTA1-205ENST00000620996 USP50Q70EL3 339 aaPredicted RBP10.91□□□□□ -0.66
VTA1-205ENST00000620996 CYFIP1Q7L576 1253 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 ARMC9Q7Z3E5 817 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 CEP170P1Q96L14 293 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 ERGIC2Q96RQ1 377 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 WDR24Q96S15 920 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 PCIF1Q9H4Z3 704 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 JPH1Q9HDC5 661 aaPredicted RBP10.91□□□□□ -0.66
VTA1-205ENST00000620996 KCND1Q9NSA2 647 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 TELO2Q9Y4R8 837 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 ASTN1O14525 1302 aa10.91□□□□□ -0.66
VTA1-205ENST00000620996 LRRC53A6NM62 1247 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 NDUFA10O95299 355 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 RARRES1P49788 294 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 PEX3P56589 373 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 POLR2FP61218 127 aaKnown RBP10.9□□□□□ -0.66
VTA1-205ENST00000620996 FSTL1Q12841 308 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 SAMD3Q8N6K7 520 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 RETREG2Q8NC44 543 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 CCDC42Q96M95 316 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 SPATC1LQ9H0A9 340 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 ASCC2Q9H1I8 757 aaPredicted RBP10.9□□□□□ -0.66
VTA1-205ENST00000620996 LARSQ9P2J5 1176 aaKnown RBP10.9□□□□□ -0.66
VTA1-205ENST00000620996 PCDHA10Q9Y5I2 948 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 RASSF10A6NK89 507 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 PDXKO00764 312 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 AKAP3O75969 853 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 PGK2P07205 417 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 PLEKP08567 350 aaPredicted RBP10.9□□□□□ -0.66
VTA1-205ENST00000620996 SFNP31947 248 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 CYLC1P35663 651 aaPredicted RBP10.9□□□□□ -0.66
VTA1-205ENST00000620996 SOX10P56693 466 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 CYP27A1Q02318 531 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 PPATQ06203 517 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 RAPGEF1Q13905 1077 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 STXBP2Q15833 593 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 SH3D19Q5HYK7 790 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 B3GNT9Q6UX72 402 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 MNS1Q8NEH6 495 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 GPRASP2Q96D09 838 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 MOV10L1Q9BXT6 1211 aaKnown RBP10.9□□□□□ -0.66
VTA1-205ENST00000620996 NHEJ1Q9H9Q4 299 aaPredicted RBP10.9□□□□□ -0.66
VTA1-205ENST00000620996 OLFML3Q9NRN5 406 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 SLC9A2Q9UBY0 812 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 ZNF215Q9UL58 517 aaPredicted RBP10.9□□□□□ -0.66
VTA1-205ENST00000620996 ODF2LQ9ULJ1 636 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 ADAMTS5Q9UNA0 930 aa10.9□□□□□ -0.66
VTA1-205ENST00000620996 SLC16A4O15374 487 aa10.9□□□□□ -0.67
VTA1-205ENST00000620996 AKR1B10O60218 316 aa10.9□□□□□ -0.67
VTA1-205ENST00000620996 EXOC3O60645 756 aa10.9□□□□□ -0.67
VTA1-205ENST00000620996 HERVK_113P62684 666 aa10.9□□□□□ -0.67
VTA1-205ENST00000620996 GHRHRQ02643 423 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms