RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 USP15Q9Y4E8 981 aaPredicted RBP7.23□□□□□ -1.25
LMO3-235ENST00000616247 PNPLA7Q6ZV29 1317 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 CLIC2O15247 247 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 SNUPNO95149 360 aaKnown RBP7.23□□□□□ -1.25
LMO3-235ENST00000616247 TDP2O95551 362 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 CCND1P24385 295 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 KCNJ1P48048 391 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 EIF3BP55884 814 aaKnown RBP7.23□□□□□ -1.25
LMO3-235ENST00000616247 LRRC63Q05C16 580 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 TRIP13Q15645 432 aaPredicted RBP7.23□□□□□ -1.25
LMO3-235ENST00000616247 EXOC3L4Q17RC7 722 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 MUM1Q2TAK8 710 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 MEX3CQ5U5Q3 659 aaKnown RBP7.23□□□□□ -1.25
LMO3-235ENST00000616247 CAPN12Q6ZSI9 719 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 TAOK1Q7L7X3 1001 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 CCDC24Q8N4L8 307 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 CUEDC2Q9H467 287 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.23□□□□□ -1.25
LMO3-235ENST00000616247 PCDHGC5Q9Y5F6 944 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 RIC1Q4ADV7 1423 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 NALCNQ8IZF0 1738 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 CREB1P16220 341 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 ATF3P18847 181 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 ECHS1P30084 290 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 GBP1P32455 592 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 GNAQP50148 359 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 COPS2P61201 443 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 NCALDP61601 193 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 KRT25Q7Z3Z0 450 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 KCNK18Q7Z418 384 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 GLYCTKQ8IVS8 523 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 REXO1Q8N1G1 1221 aaKnown RBP7.23□□□□□ -1.25
LMO3-235ENST00000616247 C3orf20Q8ND61 904 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 SCFD2Q8WU76 684 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 ARHGEF2Q92974 986 aaKnown RBP7.23□□□□□ -1.25
LMO3-235ENST00000616247 COA7Q96BR5 231 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 ARMCX3Q9UH62 379 aaPredicted RBP7.23□□□□□ -1.25
LMO3-235ENST00000616247 NAGPAQ9UK23 515 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 MEGF6O75095 1541 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 TMEM120BA0PK00 339 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 E9PMD0 336 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 GNA11P29992 359 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 CALCOCO2Q13137 446 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 SETDB1Q15047 1291 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 ASTE1Q2TB18 679 aaPredicted RBP7.22□□□□□ -1.25
LMO3-235ENST00000616247 ZFYVE27Q5T4F4 411 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 UBAP2Q5T6F2 1119 aaKnown RBP7.22□□□□□ -1.25
LMO3-235ENST00000616247 MIS18BP1Q6P0N0 1132 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 BARGINQ6ZT62 677 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 GPBP1Q86WP2 473 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 RDH13Q8NBN7 331 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 TPCN2Q8NHX9 752 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 MAGEC3Q8TD91 643 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 NAF1Q96HR8 494 aaKnown RBP7.22□□□□□ -1.25
LMO3-235ENST00000616247 ZNF512BQ96KM6 892 aaPredicted RBP7.22□□□□□ -1.25
LMO3-235ENST00000616247 AK8Q96MA6 479 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 TMEM237Q96Q45 408 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 TAOK3Q9H2K8 898 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 NKIRAS1Q9NYS0 192 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 DLGAP2Q9P1A6 1054 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 ZFATQ9P243 1243 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 CTTNBP2NLQ9P2B4 639 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 ASIC3Q9UHC3 531 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 HDAC9Q9UKV0 1011 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 INTUQ9ULD6 942 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 KIAA1024Q9UPX6 916 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 RTCBQ9Y3I0 505 aaKnown RBP7.22□□□□□ -1.25
LMO3-235ENST00000616247 NWD2Q9ULI1 1742 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 FRMPD2Q68DX3 1309 aaPredicted RBP7.22□□□□□ -1.25
LMO3-235ENST00000616247 C5orf60A6NFR6 353 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 LRRN2O75325 713 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 NOL4O94818 638 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 LUC7L3O95232 432 aaKnown RBP7.22□□□□□ -1.25
LMO3-235ENST00000616247 RANBP1P43487 201 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 ZNF131P52739 623 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 GALCP54803 685 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 RWDD2BP57060 319 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 GRIK3Q13003 919 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 COASYQ13057 564 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 GRB10Q13322 594 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 CCDC152Q4G0S7 254 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 GRIPAP1Q4V328 841 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 C6orf118Q5T5N4 469 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 TRMT1LQ7Z2T5 733 aaKnown RBP7.22□□□□□ -1.25
LMO3-235ENST00000616247 CCDC65Q8IXS2 484 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 TEKT4Q8WW24 435 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 RNF25Q96BH1 459 aaPredicted RBP7.22□□□□□ -1.25
LMO3-235ENST00000616247 C18orf8Q96DM3 657 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 NUDCD1Q96RS6 583 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 PIGSQ96S52 555 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 FGFBP2Q9BYJ0 223 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 STMN4Q9H169 189 aaPredicted RBP7.22□□□□□ -1.25
LMO3-235ENST00000616247 PABPC3Q9H361 631 aaKnown RBP7.22□□□□□ -1.25
LMO3-235ENST00000616247 SLITRK6Q9H5Y7 841 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 PAPOLBQ9NRJ5 636 aaKnown RBP7.22□□□□□ -1.25
LMO3-235ENST00000616247 KDM3BQ7LBC6 1761 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 MED1Q15648 1581 aaPredicted RBP7.22□□□□□ -1.25
LMO3-235ENST00000616247 MEIS1O00470 390 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 SNX3O60493 162 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 LCA5LO95447 670 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms