RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 SCAND2PQ9GZW5 306 aaPredicted RBP21.4■■□□□ 1.02
DDX39A-214ENST00000590556 PDLIM7Q9NR12 457 aa21.4■■□□□ 1.02
DDX39A-214ENST00000590556 ANKEF1Q9NU02 776 aa21.4■■□□□ 1.02
DDX39A-214ENST00000590556 PRKAG2Q9UGJ0 569 aa21.4■■□□□ 1.02
DDX39A-214ENST00000590556 KIAA1024Q9UPX6 916 aa21.4■■□□□ 1.02
DDX39A-214ENST00000590556 KDM3AQ9Y4C1 1321 aa21.39■■□□□ 1.01
DDX39A-214ENST00000590556 A0A087WWV3 80 aa21.39■■□□□ 1.01
DDX39A-214ENST00000590556 MBLAC1A4D2B0 266 aaPredicted RBP21.39■■□□□ 1.01
DDX39A-214ENST00000590556 SLC26A4O43511 780 aa21.39■■□□□ 1.01
DDX39A-214ENST00000590556 CUTAO60888 179 aa21.39■■□□□ 1.01
DDX39A-214ENST00000590556 XRCC6P12956 609 aaKnown RBP eCLIP21.39■■□□□ 1.01
DDX39A-214ENST00000590556 PTK7Q13308 1070 aa21.39■■□□□ 1.01
DDX39A-214ENST00000590556 TARBP2Q15633 366 aaKnown RBP21.39■■□□□ 1.01
DDX39A-214ENST00000590556 XKR9Q5GH70 373 aa21.39■■□□□ 1.01
DDX39A-214ENST00000590556 SPECC1Q5M775 1068 aa21.39■■□□□ 1.01
DDX39A-214ENST00000590556 MTHFD1LQ6UB35 978 aa21.39■■□□□ 1.01
DDX39A-214ENST00000590556 SH3RF1Q7Z6J0 888 aa21.39■■□□□ 1.01
DDX39A-214ENST00000590556 PIGOQ8TEQ8 1089 aa21.39■■□□□ 1.01
DDX39A-214ENST00000590556 ZBTB10Q96DT7 871 aa21.39■■□□□ 1.01
DDX39A-214ENST00000590556 CDK5RAP3Q96JB5 506 aa21.39■■□□□ 1.01
DDX39A-214ENST00000590556 CEP170P1Q96L14 293 aa21.39■■□□□ 1.01
DDX39A-214ENST00000590556 CCDC43Q96MW1 224 aaKnown RBP21.39■■□□□ 1.01
DDX39A-214ENST00000590556 SH2D3AQ9BRG2 576 aa21.39■■□□□ 1.01
DDX39A-214ENST00000590556 CYP26B1Q9NR63 512 aa21.39■■□□□ 1.01
DDX39A-214ENST00000590556 DDX19AQ9NUU7 478 aaKnown RBP21.39■■□□□ 1.01
DDX39A-214ENST00000590556 TBX21Q9UL17 535 aa21.39■■□□□ 1.01
DDX39A-214ENST00000590556 KIAA0355O15063 1070 aa21.38■■□□□ 1.01
DDX39A-214ENST00000590556 MAGEB2O15479 319 aa21.38■■□□□ 1.01
DDX39A-214ENST00000590556 NPEPPSP55786 919 aa21.38■■□□□ 1.01
DDX39A-214ENST00000590556 TBC1D8BQ0IIM8 1120 aa21.38■■□□□ 1.01
DDX39A-214ENST00000590556 CALML4Q96GE6 196 aa21.38■■□□□ 1.01
DDX39A-214ENST00000590556 EPSTI1Q96J88 318 aa21.38■■□□□ 1.01
DDX39A-214ENST00000590556 PCDHA7Q9UN72 937 aa21.38■■□□□ 1.01
DDX39A-214ENST00000590556 PCDHA2Q9Y5H9 948 aa21.38■■□□□ 1.01
DDX39A-214ENST00000590556 TRIM43BA6NCK2 446 aa21.37■■□□□ 1.01
DDX39A-214ENST00000590556 C22orf31O95567 290 aa21.37■■□□□ 1.01
DDX39A-214ENST00000590556 TXLNAP40222 546 aa21.37■■□□□ 1.01
DDX39A-214ENST00000590556 GRB10Q13322 594 aa21.37■■□□□ 1.01
DDX39A-214ENST00000590556 HYIQ5T013 277 aa21.37■■□□□ 1.01
DDX39A-214ENST00000590556 TAF2Q6P1X5 1199 aa21.37■■□□□ 1.01
DDX39A-214ENST00000590556 RUFY4Q6ZNE9 571 aa21.37■■□□□ 1.01
DDX39A-214ENST00000590556 USP49Q70CQ1 688 aa21.37■■□□□ 1.01
DDX39A-214ENST00000590556 CCDC155Q8N6L0 562 aa21.37■■□□□ 1.01
DDX39A-214ENST00000590556 ZNF579Q8NAF0 562 aaKnown RBP21.37■■□□□ 1.01
DDX39A-214ENST00000590556 RASSF8Q8NHQ8 419 aa21.37■■□□□ 1.01
DDX39A-214ENST00000590556 DHX38Q92620 1227 aaKnown RBP21.37■■□□□ 1.01
DDX39A-214ENST00000590556 SYMPKQ92797 1274 aaKnown RBP21.37■■□□□ 1.01
DDX39A-214ENST00000590556 TRIM43Q96BQ3 446 aaPredicted RBP21.37■■□□□ 1.01
DDX39A-214ENST00000590556 PNMA5Q96PV4 448 aa21.37■■□□□ 1.01
DDX39A-214ENST00000590556 PLIN2Q99541 437 aa21.37■■□□□ 1.01
DDX39A-214ENST00000590556 NOC4LQ9BVI4 516 aaKnown RBP21.37■■□□□ 1.01
DDX39A-214ENST00000590556 CCSER1Q9C0I3 900 aa21.37■■□□□ 1.01
DDX39A-214ENST00000590556 NT5C3AQ9H0P0 336 aa21.37■■□□□ 1.01
DDX39A-214ENST00000590556 HIPK3Q9H422 1215 aa21.37■■□□□ 1.01
DDX39A-214ENST00000590556 DBR1Q9UK59 544 aaKnown RBP21.37■■□□□ 1.01
DDX39A-214ENST00000590556 DNM3Q9UQ16 869 aa21.37■■□□□ 1.01
DDX39A-214ENST00000590556 PPME1Q9Y570 386 aa21.37■■□□□ 1.01
DDX39A-214ENST00000590556 BFSP2Q13515 415 aa21.36■■□□□ 1.01
DDX39A-214ENST00000590556 AXDND1Q5T1B0 1012 aaPredicted RBP21.36■■□□□ 1.01
DDX39A-214ENST00000590556 KCTD17Q8N5Z5 321 aa21.36■■□□□ 1.01
DDX39A-214ENST00000590556 METTL13Q8N6R0 699 aa21.36■■□□□ 1.01
DDX39A-214ENST00000590556 RETREG2Q8NC44 543 aa21.36■■□□□ 1.01
DDX39A-214ENST00000590556 CAGE1Q8TC20 777 aa21.36■■□□□ 1.01
DDX39A-214ENST00000590556 WNT8BQ93098 351 aa21.36■■□□□ 1.01
DDX39A-214ENST00000590556 CEP89Q96ST8 783 aa21.36■■□□□ 1.01
DDX39A-214ENST00000590556 PPP1R12CQ9BZL4 782 aa21.36■■□□□ 1.01
DDX39A-214ENST00000590556 FAM49AQ9H0Q0 323 aaPredicted RBP21.36■■□□□ 1.01
DDX39A-214ENST00000590556 ZMYND8Q9ULU4 1186 aaPredicted RBP21.36■■□□□ 1.01
DDX39A-214ENST00000590556 EVPLQ92817 2033 aa21.36■■□□□ 1.01
DDX39A-214ENST00000590556 SMIM35A0A1B0GVV1 85 aa21.35■■□□□ 1.01
DDX39A-214ENST00000590556 RAG1P15918 1043 aa21.35■■□□□ 1.01
DDX39A-214ENST00000590556 SYN1P17600 705 aa21.35■■□□□ 1.01
DDX39A-214ENST00000590556 RFC5P40937 340 aa21.35■■□□□ 1.01
DDX39A-214ENST00000590556 RARRES1P49788 294 aa21.35■■□□□ 1.01
DDX39A-214ENST00000590556 KARSQ15046 597 aaKnown RBP21.35■■□□□ 1.01
DDX39A-214ENST00000590556 TRIM71Q2Q1W2 868 aaKnown RBP21.35■■□□□ 1.01
DDX39A-214ENST00000590556 TMEM119Q4V9L6 283 aa21.35■■□□□ 1.01
DDX39A-214ENST00000590556 RSPH3Q86UC2 560 aa21.35■■□□□ 1.01
DDX39A-214ENST00000590556 EXOC8Q8IYI6 725 aa21.35■■□□□ 1.01
DDX39A-214ENST00000590556 JPH2Q9BR39 696 aaPredicted RBP21.35■■□□□ 1.01
DDX39A-214ENST00000590556 SUGCTQ9HAC7 445 aa21.35■■□□□ 1.01
DDX39A-214ENST00000590556 GDPD2Q9HCC8 539 aa21.35■■□□□ 1.01
DDX39A-214ENST00000590556 CCDC39Q9UFE4 941 aa21.35■■□□□ 1.01
DDX39A-214ENST00000590556 PDE4DIPQ5VU43 2346 aa21.35■■□□□ 1.01
DDX39A-214ENST00000590556 ARHGEF35A5YM69 484 aa21.34■■□□□ 1.01
DDX39A-214ENST00000590556 E9PMD0 336 aa21.34■■□□□ 1.01
DDX39A-214ENST00000590556 MAFO75444 373 aaPredicted RBP21.34■■□□□ 1.01
DDX39A-214ENST00000590556 EYA4O95677 639 aa21.34■■□□□ 1.01
DDX39A-214ENST00000590556 TIMP1P01033 207 aa21.34■■□□□ 1.01
DDX39A-214ENST00000590556 TMOD1P28289 359 aa21.34■■□□□ 1.01
DDX39A-214ENST00000590556 THPOP40225 353 aa21.34■■□□□ 1.01
DDX39A-214ENST00000590556 POLGP54098 1239 aaPredicted RBP21.34■■□□□ 1.01
DDX39A-214ENST00000590556 EFCAB12Q6NXP0 572 aa21.34■■□□□ 1.01
DDX39A-214ENST00000590556 DNAJB3Q8WWF6 145 aa21.34■■□□□ 1.01
DDX39A-214ENST00000590556 SLC7A3Q8WY07 619 aa21.34■■□□□ 1.01
DDX39A-214ENST00000590556 ARID2Q68CP9 1835 aa21.34■■□□□ 1.01
DDX39A-214ENST00000590556 CEP290O15078 2479 aa21.33■■□□□ 1.01
DDX39A-214ENST00000590556 PITPNM1O00562 1244 aa21.33■■□□□ 1.01
DDX39A-214ENST00000590556 RPLP2P05387 115 aaKnown RBP21.33■■□□□ 1.01
DDX39A-214ENST00000590556 CKBP12277 381 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms