RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 BCL11AQ9H165 835 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 TRIT1Q9H3H1 467 aaKnown RBP4.91□□□□□ -1.62
DDX42-211ENST00000580108 COPRSQ9NQ92 184 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 GPATCH2Q9NW75 528 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.91□□□□□ -1.62
DDX42-211ENST00000580108 PTPRFP10586 1907 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 MAST2Q6P0Q8 1798 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 PHIPQ8WWQ0 1821 aa4.9□□□□□ -1.62
DDX42-211ENST00000580108 MYOCOSA0A1B0GUC4 107 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 SHISA3A0PJX4 238 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 FAM221AA4D161 298 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 ANKRD33BA6NCL7 494 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 TCAF2A6NFQ2 919 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 DNAJA2O60884 412 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 CILPO75339 1184 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 CIAO1O76071 339 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 GNAI2P04899 355 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 INHBBP09529 407 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 PLCG1P19174 1290 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 NF2P35240 595 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 IL15P40933 162 aaPredicted RBP4.9□□□□□ -1.63
DDX42-211ENST00000580108 SOX10P56693 466 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 MTX1Q13505 466 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 VGLL4Q14135 290 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 TMEM201Q5SNT2 666 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 LCE5AQ5TCM9 118 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 C20orf194Q5TEA3 1177 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 CDC42EP5Q6NZY7 148 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 ARMC9Q7Z3E5 817 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 CCDC84Q86UT8 332 aaPredicted RBP4.9□□□□□ -1.63
DDX42-211ENST00000580108 RNF141Q8WVD5 230 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 ARHGAP45Q92619 1136 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 ZKSCAN4Q969J2 545 aaPredicted RBP4.9□□□□□ -1.63
DDX42-211ENST00000580108 TEKT1Q969V4 418 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 PTPN18Q99952 460 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 PARP2Q9UGN5 583 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 ZBED9Q6R2W3 1325 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 DOCK1Q14185 1865 aa4.9□□□□□ -1.63
DDX42-211ENST00000580108 FOCADQ5VW36 1801 aa4.89□□□□□ -1.63
DDX42-211ENST00000580108 MYO1BO43795 1136 aa4.89□□□□□ -1.63
DDX42-211ENST00000580108 EFEMP2O95967 443 aa4.89□□□□□ -1.63
DDX42-211ENST00000580108 GNAI3P08754 354 aa4.89□□□□□ -1.63
DDX42-211ENST00000580108 MCAMP43121 646 aa4.89□□□□□ -1.63
DDX42-211ENST00000580108 FKBP1BP68106 108 aa4.89□□□□□ -1.63
DDX42-211ENST00000580108 DAB2P98082 770 aa4.89□□□□□ -1.63
DDX42-211ENST00000580108 SHROOM1Q2M3G4 852 aaPredicted RBP4.89□□□□□ -1.63
DDX42-211ENST00000580108 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.89□□□□□ -1.63
DDX42-211ENST00000580108 ZNF296Q8WUU4 475 aaPredicted RBP4.89□□□□□ -1.63
DDX42-211ENST00000580108 KCNN1Q92952 543 aa4.89□□□□□ -1.63
DDX42-211ENST00000580108 OPTNQ96CV9 577 aa4.89□□□□□ -1.63
DDX42-211ENST00000580108 ZDHHC15Q96MV8 337 aa4.89□□□□□ -1.63
DDX42-211ENST00000580108 NOC4LQ9BVI4 516 aaKnown RBP4.89□□□□□ -1.63
DDX42-211ENST00000580108 CCDC8Q9H0W5 538 aaPredicted RBP4.89□□□□□ -1.63
DDX42-211ENST00000580108 DDX4Q9NQI0 724 aaKnown RBP4.89□□□□□ -1.63
DDX42-211ENST00000580108 USP40Q9NVE5 1235 aa4.89□□□□□ -1.63
DDX42-211ENST00000580108 HMG20BQ9P0W2 317 aa4.89□□□□□ -1.63
DDX42-211ENST00000580108 ABCF2Q9UG63 623 aa4.89□□□□□ -1.63
DDX42-211ENST00000580108 RAPGEFL1Q9UHV5 662 aa4.89□□□□□ -1.63
DDX42-211ENST00000580108 POLR3KQ9Y2Y1 108 aaPredicted RBP4.89□□□□□ -1.63
DDX42-211ENST00000580108 NCANO14594 1321 aa4.89□□□□□ -1.63
DDX42-211ENST00000580108 RFX7Q2KHR2 1363 aa4.89□□□□□ -1.63
DDX42-211ENST00000580108 MGAMO43451 1857 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 TNRC18O15417 2968 aaPredicted RBP4.88□□□□□ -1.63
DDX42-211ENST00000580108 MYH1P12882 1939 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 DDTLA6NHG4 134 aaPredicted RBP4.88□□□□□ -1.63
DDX42-211ENST00000580108 CHURC1-FNTBB4DL54 471 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 PRRG2O14669 202 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 IPO8O15397 1037 aaKnown RBP4.88□□□□□ -1.63
DDX42-211ENST00000580108 CA12O43570 354 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 NUAK1O60285 661 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 SURF6O75683 361 aaKnown RBP4.88□□□□□ -1.63
DDX42-211ENST00000580108 F13A1P00488 732 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 PF4P02776 101 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 BTDP43251 543 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 TM4SF4P48230 202 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 RGS3P49796 1198 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 ST13P50502 369 aaKnown RBP4.88□□□□□ -1.63
DDX42-211ENST00000580108 GALK1P51570 392 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 YARSP54577 528 aaKnown RBP4.88□□□□□ -1.63
DDX42-211ENST00000580108 ATP8B2P98198 1209 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 HDLBPQ00341 1268 aaKnown RBP4.88□□□□□ -1.63
DDX42-211ENST00000580108 TEKQ02763 1124 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 MECOMQ03112 1051 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 LMNB2Q03252 620 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 G3BP1Q13283 466 aaKnown RBP eCLIP4.88□□□□□ -1.63
DDX42-211ENST00000580108 CRHR2Q13324 411 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 OS9Q13438 667 aaPredicted RBP4.88□□□□□ -1.63
DDX42-211ENST00000580108 PICALMQ13492 652 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 NR0B2Q15466 257 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 TAF1CQ15572 869 aaPredicted RBP4.88□□□□□ -1.63
DDX42-211ENST00000580108 SLC4A8Q2Y0W8 1093 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 SUPT20HL1Q3ZLR7 823 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 CEP85Q6P2H3 762 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 HHIPL2Q6UWX4 724 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 ADGRA1Q86SQ6 560 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 IRF2BP1Q8IU81 584 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 FTSJ3Q8IY81 847 aaKnown RBP4.88□□□□□ -1.63
DDX42-211ENST00000580108 SLFN12Q8IYM2 578 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 LILRA2Q8N149 483 aa4.88□□□□□ -1.63
DDX42-211ENST00000580108 FAM43AQ8N2R8 423 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms