RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 ME3Q16798 604 aa16.81■□□□□ 0.28
NPLOC4-207ENST00000572346 NPAS4Q8IUM7 802 aa16.81■□□□□ 0.28
NPLOC4-207ENST00000572346 CMTR2Q8IYT2 770 aaKnown RBP16.81■□□□□ 0.28
NPLOC4-207ENST00000572346 P2RX5Q93086 422 aa16.81■□□□□ 0.28
NPLOC4-207ENST00000572346 CELF4Q9BZC1 486 aaKnown RBP16.81■□□□□ 0.28
NPLOC4-207ENST00000572346 FAM217BQ9NTX9 383 aaPredicted RBP16.81■□□□□ 0.28
NPLOC4-207ENST00000572346 PLAGL2Q9UPG8 496 aa16.81■□□□□ 0.28
NPLOC4-207ENST00000572346 MRPL42Q9Y6G3 142 aaKnown RBP16.81■□□□□ 0.28
NPLOC4-207ENST00000572346 V9GY48 417 aaPredicted RBP16.81■□□□□ 0.28
NPLOC4-207ENST00000572346 KDM3AQ9Y4C1 1321 aa16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 SMCO2A6NFE2 343 aa16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 C19orf67A6NJJ6 358 aa16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 hCG_1984214I3L0E3 225 aa16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 MEIS1O00470 390 aa16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 CDKL5O76039 1030 aa16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 GTF2F1P35269 517 aaKnown RBP eCLIP16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 SREBF1P36956 1147 aa16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 SCRN1Q12765 414 aa16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 PAK2Q13177 524 aa16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 MTHFD1LQ6UB35 978 aa16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 ADHFE1Q8IWW8 467 aa16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 TRIM22Q8IYM9 498 aa16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 NME8Q8N427 588 aa16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 ZNF713Q8N859 430 aaPredicted RBP16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 NECAB1Q8N987 351 aa16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 SH2B1Q9NRF2 756 aaPredicted RBP16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 TMEM260Q9NX78 707 aa16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 BARHL2Q9NY43 387 aa16.8■□□□□ 0.28
NPLOC4-207ENST00000572346 IGKV6D-21A0A0A0MT36 114 aa16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 DCXO43602 365 aa16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 TBX10O75333 385 aa16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 LARGE1O95461 756 aa16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 CCNE2O96020 404 aa16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 ITGB1P05556 798 aa16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 STAG3L1P0CL83 205 aa16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 SCG2P13521 617 aa16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 CLK2P49760 499 aaKnown RBP16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 SLC26A2P50443 739 aa16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 KRT76Q01546 638 aa16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 SSRP1Q08945 709 aaKnown RBP16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 AP3B2Q13367 1082 aa16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 SMAD2Q15796 467 aaKnown RBP16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 CLUL1Q15846 466 aa16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 PAN2Q504Q3 1202 aaKnown RBP16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 SLC26A6Q9BXS9 759 aa16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 TMX1Q9H3N1 280 aa16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 IGFLR1Q9H665 355 aa16.79■□□□□ 0.28
NPLOC4-207ENST00000572346 DDX39AO00148 427 aaKnown RBP16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 LINC01565O15544 149 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 MBTPS2O43462 519 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 HBP1O60381 514 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 IFNAR1P17181 557 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 DNAJB1P25685 340 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 KLRC1P26715 233 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 ZNF76P36508 570 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 TMEM266Q2M3C6 531 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 NAALADL2Q58DX5 795 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 ABHD15Q6UXT9 468 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 NIPA1Q7RTP0 329 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 KLHL23Q8NBE8 558 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 SPPL3Q8TCT6 385 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 PHKBQ93100 1093 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 GTF3C6Q969F1 213 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 GLT8D2Q9H1C3 349 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 EVPLQ92817 2033 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 MUC6Q6W4X9 2439 aa16.78■□□□□ 0.28
NPLOC4-207ENST00000572346 FAM86B1E9PN63 330 aa16.77■□□□□ 0.28
NPLOC4-207ENST00000572346 BACH1O14867 736 aa16.77■□□□□ 0.28
NPLOC4-207ENST00000572346 PRPF3O43395 683 aaKnown RBP16.77■□□□□ 0.28
NPLOC4-207ENST00000572346 PPFIA3O75145 1194 aa16.77■□□□□ 0.28
NPLOC4-207ENST00000572346 FAM86B2P0C5J1 330 aa16.77■□□□□ 0.28
NPLOC4-207ENST00000572346 IRS1P35568 1242 aa16.77■□□□□ 0.28
NPLOC4-207ENST00000572346 GATMP50440 423 aa16.77■□□□□ 0.28
NPLOC4-207ENST00000572346 NFX1Q12986 1120 aaKnown RBP16.77■□□□□ 0.28
NPLOC4-207ENST00000572346 ADAM15Q13444 863 aa16.77■□□□□ 0.28
NPLOC4-207ENST00000572346 FAM160B1Q5W0V3 765 aa16.77■□□□□ 0.28
NPLOC4-207ENST00000572346 PLA2G4DQ86XP0 818 aa16.77■□□□□ 0.28
NPLOC4-207ENST00000572346 CCDC60Q8IWA6 550 aaPredicted RBP16.77■□□□□ 0.28
NPLOC4-207ENST00000572346 CCDC83Q8IWF9 413 aa16.77■□□□□ 0.28
NPLOC4-207ENST00000572346 ATP8B4Q8TF62 1192 aa16.77■□□□□ 0.28
NPLOC4-207ENST00000572346 RNF26Q9BY78 433 aaPredicted RBP16.77■□□□□ 0.28
NPLOC4-207ENST00000572346 GINS2Q9Y248 185 aa16.77■□□□□ 0.28
NPLOC4-207ENST00000572346 FNDC1Q4ZHG4 1894 aaPredicted RBP16.76■□□□□ 0.27
NPLOC4-207ENST00000572346 PLXNA4Q9HCM2 1894 aa16.76■□□□□ 0.27
NPLOC4-207ENST00000572346 IGLV3-22A0A075B6J6 115 aa16.76■□□□□ 0.27
NPLOC4-207ENST00000572346 DHX15O43143 795 aaKnown RBP16.76■□□□□ 0.27
NPLOC4-207ENST00000572346 MGEA5O60502 916 aa16.76■□□□□ 0.27
NPLOC4-207ENST00000572346 SARSP49591 514 aaKnown RBP16.76■□□□□ 0.27
NPLOC4-207ENST00000572346 SMAD4Q13485 552 aaKnown RBP16.76■□□□□ 0.27
NPLOC4-207ENST00000572346 NTRK3Q16288 839 aa16.76■□□□□ 0.27
NPLOC4-207ENST00000572346 CSPP1Q1MSJ5 1256 aa16.76■□□□□ 0.27
NPLOC4-207ENST00000572346 JAKMIP3Q5VZ66 844 aa16.76■□□□□ 0.27
NPLOC4-207ENST00000572346 ADGRD2Q7Z7M1 963 aa16.76■□□□□ 0.27
NPLOC4-207ENST00000572346 KIAA0319LQ8IZA0 1049 aa16.76■□□□□ 0.27
NPLOC4-207ENST00000572346 POF1BQ8WVV4 589 aa16.76■□□□□ 0.27
NPLOC4-207ENST00000572346 TMEM40Q8WWA1 233 aa16.76■□□□□ 0.27
NPLOC4-207ENST00000572346 CRYGNQ8WXF5 182 aa16.76■□□□□ 0.27
NPLOC4-207ENST00000572346 PPP2R3CQ969Q6 453 aa16.76■□□□□ 0.27
NPLOC4-207ENST00000572346 UIMC1Q96RL1 719 aa16.76■□□□□ 0.27
NPLOC4-207ENST00000572346 CDHR5Q9HBB8 845 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms