RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 PPTC7Q8NI37 304 aa33.94■■■■□ 3.02
CTCF-203ENST00000566078 RSPH10B2B2RC85 870 aa33.93■■■■□ 3.02
CTCF-203ENST00000566078 RSPH10BP0C881 870 aa33.93■■■■□ 3.02
CTCF-203ENST00000566078 GUCY2CP25092 1073 aa33.93■■■■□ 3.02
CTCF-203ENST00000566078 PSMD2Q13200 908 aa33.93■■■■□ 3.02
CTCF-203ENST00000566078 KLHL10Q6JEL2 608 aa33.93■■■■□ 3.02
CTCF-203ENST00000566078 GLG1Q92896 1179 aa33.93■■■■□ 3.02
CTCF-203ENST00000566078 CEP170P1Q96L14 293 aa33.93■■■■□ 3.02
CTCF-203ENST00000566078 SLC39A2Q9NP94 309 aa33.93■■■■□ 3.02
CTCF-203ENST00000566078 HERC4Q5GLZ8 1057 aaPredicted RBP33.93■■■■□ 3.02
CTCF-203ENST00000566078 MFSD14CQ5VZR4 134 aa33.93■■■■□ 3.02
CTCF-203ENST00000566078 TRIM50Q86XT4 487 aa33.93■■■■□ 3.02
CTCF-203ENST00000566078 KIAA0895Q8NCT3 520 aa33.93■■■■□ 3.02
CTCF-203ENST00000566078 AFG1LQ8WV93 481 aa33.93■■■■□ 3.02
CTCF-203ENST00000566078 MAPK8IP1Q9UQF2 711 aa33.93■■■■□ 3.02
CTCF-203ENST00000566078 PRCPP42785 496 aa33.92■■■■□ 3.02
CTCF-203ENST00000566078 UVSSAQ2YD98 709 aa33.92■■■■□ 3.02
CTCF-203ENST00000566078 CT47A1Q5JQC4 288 aaPredicted RBP33.92■■■■□ 3.02
CTCF-203ENST00000566078 ERO1AQ96HE7 468 aa33.92■■■■□ 3.02
CTCF-203ENST00000566078 POLD4Q9HCU8 107 aa33.92■■■■□ 3.02
CTCF-203ENST00000566078 SRRDQ9UH36 339 aa33.92■■■■□ 3.02
CTCF-203ENST00000566078 CTNND2Q9UQB3 1225 aa33.92■■■■□ 3.02
CTCF-203ENST00000566078 GOLGA6L19H0YKK7 550 aa33.91■■■■□ 3.02
CTCF-203ENST00000566078 FAM13AO94988 1023 aa33.91■■■■□ 3.02
CTCF-203ENST00000566078 HOXD10P28358 340 aa33.91■■■■□ 3.02
CTCF-203ENST00000566078 FAM26FQ5R3K3 315 aa33.91■■■■□ 3.02
CTCF-203ENST00000566078 ODF2LQ9ULJ1 636 aa33.91■■■■□ 3.02
CTCF-203ENST00000566078 COL4A3BPQ9Y5P4 624 aa33.91■■■■□ 3.02
CTCF-203ENST00000566078 FKTNO75072 461 aa33.9■■■■□ 3.02
CTCF-203ENST00000566078 ERCC5P28715 1186 aaPredicted RBP33.9■■■■□ 3.02
CTCF-203ENST00000566078 STIM1Q13586 685 aa33.9■■■■□ 3.02
CTCF-203ENST00000566078 PLPPR4Q7Z2D5 763 aa33.9■■■■□ 3.02
CTCF-203ENST00000566078 SFR1Q86XK3 245 aa33.9■■■■□ 3.02
CTCF-203ENST00000566078 TRMT44Q8IYL2 757 aaKnown RBP33.9■■■■□ 3.02
CTCF-203ENST00000566078 ADSSL1Q8N142 457 aa33.9■■■■□ 3.02
CTCF-203ENST00000566078 CYP26B1Q9NR63 512 aa33.9■■■■□ 3.02
CTCF-203ENST00000566078 TBC1D7Q9P0N9 293 aa33.9■■■■□ 3.02
CTCF-203ENST00000566078 GNEQ9Y223 722 aaKnown RBP33.9■■■■□ 3.02
CTCF-203ENST00000566078 SYNRGQ9UMZ2 1314 aa33.9■■■■□ 3.02
CTCF-203ENST00000566078 MYL5Q02045 173 aa33.9■■■■□ 3.02
CTCF-203ENST00000566078 MTERF2Q49AM1 385 aa33.9■■■■□ 3.02
CTCF-203ENST00000566078 LENG1Q96BZ8 264 aaPredicted RBP33.9■■■■□ 3.02
CTCF-203ENST00000566078 FAM167AQ96KS9 214 aa33.9■■■■□ 3.02
CTCF-203ENST00000566078 SMARCAD1Q9H4L7 1026 aa33.9■■■■□ 3.02
CTCF-203ENST00000566078 NRBP1Q9UHY1 535 aa33.9■■■■□ 3.02
CTCF-203ENST00000566078 FAM184BQ9ULE4 1060 aa33.9■■■■□ 3.02
CTCF-203ENST00000566078 SMTNL1A8MU46 457 aa33.89■■■■□ 3.02
CTCF-203ENST00000566078 IKBKBO14920 756 aa33.89■■■■□ 3.02
CTCF-203ENST00000566078 HIP1RO75146 1068 aa33.89■■■■□ 3.02
CTCF-203ENST00000566078 GAP43P17677 238 aa33.89■■■■□ 3.02
CTCF-203ENST00000566078 MARK3P27448 753 aa33.89■■■■□ 3.02
CTCF-203ENST00000566078 ZNF296Q8WUU4 475 aaPredicted RBP33.89■■■■□ 3.02
CTCF-203ENST00000566078 NRBP2Q9NSY0 501 aa33.89■■■■□ 3.02
CTCF-203ENST00000566078 KAT6AQ92794 2004 aa33.88■■■■□ 3.01
CTCF-203ENST00000566078 LGALS2P05162 132 aa33.88■■■■□ 3.01
CTCF-203ENST00000566078 COBLL1Q53SF7 1204 aa33.88■■■■□ 3.01
CTCF-203ENST00000566078 MAEAQ7L5Y9 396 aa33.88■■■■□ 3.01
CTCF-203ENST00000566078 TLK2Q86UE8 772 aa33.88■■■■□ 3.01
CTCF-203ENST00000566078 TRPV1Q8NER1 839 aa33.88■■■■□ 3.01
CTCF-203ENST00000566078 PARVGQ9HBI0 331 aa33.88■■■■□ 3.01
CTCF-203ENST00000566078 PCDHA2Q9Y5H9 948 aa33.88■■■■□ 3.01
CTCF-203ENST00000566078 SFI1A8K8P3 1242 aa33.87■■■■□ 3.01
CTCF-203ENST00000566078 MMP3P08254 477 aa33.87■■■■□ 3.01
CTCF-203ENST00000566078 CYBAP13498 195 aa33.87■■■■□ 3.01
CTCF-203ENST00000566078 STX17P56962 302 aa33.87■■■■□ 3.01
CTCF-203ENST00000566078 MAP2K1Q02750 393 aaPredicted RBP33.87■■■■□ 3.01
CTCF-203ENST00000566078 PAK1Q13153 545 aa33.87■■■■□ 3.01
CTCF-203ENST00000566078 MAPK7Q13164 816 aa33.87■■■■□ 3.01
CTCF-203ENST00000566078 NCAPHQ15003 741 aa33.87■■■■□ 3.01
CTCF-203ENST00000566078 NELFBQ8WX92 580 aa33.87■■■■□ 3.01
CTCF-203ENST00000566078 TIPINQ9BVW5 301 aa33.87■■■■□ 3.01
CTCF-203ENST00000566078 NIFKQ9BYG3 293 aaKnown RBP33.87■■■■□ 3.01
CTCF-203ENST00000566078 DYNC1LI2O43237 492 aaPredicted RBP33.86■■■■□ 3.01
CTCF-203ENST00000566078 GNRH1P01148 92 aa33.86■■■■□ 3.01
CTCF-203ENST00000566078 AKR1A1P14550 325 aa33.86■■■■□ 3.01
CTCF-203ENST00000566078 PPP1R2P41236 205 aa33.86■■■■□ 3.01
CTCF-203ENST00000566078 SLC26A2P50443 739 aa33.86■■■■□ 3.01
CTCF-203ENST00000566078 ZNF131P52739 623 aa33.86■■■■□ 3.01
CTCF-203ENST00000566078 MYCT1Q8N699 235 aa33.86■■■■□ 3.01
CTCF-203ENST00000566078 GLIS3Q8NEA6 775 aa33.86■■■■□ 3.01
CTCF-203ENST00000566078 FGFBP2Q9BYJ0 223 aa33.86■■■■□ 3.01
CTCF-203ENST00000566078 PSMA7O14818 248 aa33.86■■■■□ 3.01
CTCF-203ENST00000566078 C1QTNF8P60827 252 aa33.86■■■■□ 3.01
CTCF-203ENST00000566078 PLCB4Q15147 1175 aa33.86■■■■□ 3.01
CTCF-203ENST00000566078 DAW1Q8N136 415 aa33.86■■■■□ 3.01
CTCF-203ENST00000566078 BBXQ8WY36 941 aaPredicted RBP33.86■■■■□ 3.01
CTCF-203ENST00000566078 MED15Q96RN5 788 aa33.86■■■■□ 3.01
CTCF-203ENST00000566078 BEGAINQ9BUH8 593 aa33.86■■■■□ 3.01
CTCF-203ENST00000566078 RWDD2AQ9UIY3 292 aa33.86■■■■□ 3.01
CTCF-203ENST00000566078 DGAT1O75907 488 aa33.85■■■■□ 3.01
CTCF-203ENST00000566078 ZNF286BP0CG31 522 aa33.85■■■■□ 3.01
CTCF-203ENST00000566078 ELNP15502 786 aa33.85■■■■□ 3.01
CTCF-203ENST00000566078 TRIM32Q13049 653 aa33.85■■■■□ 3.01
CTCF-203ENST00000566078 LRRC41Q15345 812 aa33.85■■■■□ 3.01
CTCF-203ENST00000566078 ENOX1Q8TC92 643 aaKnown RBP33.85■■■■□ 3.01
CTCF-203ENST00000566078 ATP8B4Q8TF62 1192 aa33.85■■■■□ 3.01
CTCF-203ENST00000566078 ERAP1Q9NZ08 941 aa33.85■■■■□ 3.01
CTCF-203ENST00000566078 TSKSQ9UJT2 592 aa33.85■■■■□ 3.01
CTCF-203ENST00000566078 PPFIA4O75335 1185 aa33.84■■■■□ 3.01
CTCF-203ENST00000566078 ATP6V0A4Q9HBG4 840 aa33.84■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms