RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SMARCA1P28370 1054 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PAGE2Q7Z2X7 111 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 RFX6Q8HWS3 928 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 MEIS1O00470 390 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 LLGL2Q6P1M3 1020 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 SRRM1Q8IYB3 904 aaKnown RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 STAG2Q8N3U4 1231 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 KRT25Q7Z3Z0 450 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PDIK1LQ8N165 341 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 OXER1Q8TDS5 423 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 GORASP1Q9BQQ3 440 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 UBE4BO95155 1302 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 TTC27Q6P3X3 843 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PGRMC1O00264 195 aaKnown RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 FOXP2O15409 715 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 LGR5O75473 907 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 VHLP40337 213 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 SFSWAPQ12872 951 aaKnown RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 ATP6V0A4Q9HBG4 840 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 DMAP1Q9NPF5 467 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 SIRT1Q96EB6 747 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 TEX13AQ9BXU3 409 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 ZAP70P43403 619 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 KRT81Q14533 505 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 FUKQ8N0W3 1084 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 OR8H2Q8N162 312 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PCIF1Q9H4Z3 704 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 RAB21Q9UL25 225 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 RPL5P46777 297 aaKnown RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 TMED2Q15363 201 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 KIAA0825Q8IV33 1275 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 FAM161BQ96MY7 647 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 NDNQ99608 321 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 BRIP1Q9BX63 1249 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 ANKFY1Q9P2R3 1169 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 H3BSA7 217 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 IL12RB1P42701 662 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 FAM83BQ5T0W9 1011 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 MFN1Q8IWA4 741 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 STK24Q9Y6E0 443 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 UBOX5O94941 541 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 PRLRP16471 622 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 RPS6KA3P51812 740 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 DSCC1Q9BVC3 393 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 FOXP1Q9H334 677 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 SPC25Q9HBM1 224 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 DMGDHQ9UI17 866 aaKnown RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 RSPH10B2B2RC85 870 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 RSPH10BP0C881 870 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 KRR1Q13601 381 aaKnown RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 TC2NQ8N9U0 490 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 ING2Q9H160 280 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 SEMA4AQ9H3S1 761 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 KLRF2D3W0D1 207 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 IST1P53990 364 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 ARL4CP56559 192 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 SGO2Q562F6 1265 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 FAM81BQ96LP2 452 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 BRD8Q9H0E9 1235 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 JAG2Q9Y219 1238 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 LGALS16A8MUM7 142 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 ZFYVE19Q96K21 471 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 VPS11Q9H270 941 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 LIMA1Q9UHB6 759 aaKnown RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 ZSCAN9O15535 394 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 DCTN2Q13561 401 aaKnown RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 HADHQ16836 314 aaKnown RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 VTI1AQ96AJ9 217 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 ATAD3AQ9NVI7 634 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 THRAP10827 490 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 PSMC2P35998 433 aaKnown RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 DRAP1Q14919 205 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 RESP18Q5W5W9 173 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 IFNL3Q8IZI9 196 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 COX4I2Q96KJ9 171 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 BTBD10Q9BSF8 475 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 MRPL1Q9BYD6 325 aaKnown RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 TRAF2Q12933 501 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 TRADDQ15628 312 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 KBTBD3Q8NAB2 608 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 SUCLG2Q96I99 432 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 ANKZF1Q9H8Y5 726 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 SNX12Q9UMY4 172 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 TRIM33Q9UPN9 1127 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 CAB39Q9Y376 341 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 IFRD2Q12894 506 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 SF3B3Q15393 1217 aaKnown RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 ZNF483Q8TF39 744 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 EYA1Q99502 592 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 SERPINB1P30740 379 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 BRDTQ58F21 947 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 C1orf228Q6PIY5 440 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 B3GNT6Q6ZMB0 384 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 NSUN7Q8NE18 718 aaKnown RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 PPP1R14BQ96C90 147 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 ALDH8A1Q9H2A2 487 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 EHMT1Q9H9B1 1298 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 SUCLA2Q9P2R7 463 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms