RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 KLRC1P26715 233 aa13.57□□□□□ -0.24
ACTN1-221ENST00000556571 MCM5P33992 734 aa13.57□□□□□ -0.24
ACTN1-221ENST00000556571 ERVFC1P60507 584 aa13.57□□□□□ -0.24
ACTN1-221ENST00000556571 TMEM184AQ6ZMB5 413 aa13.57□□□□□ -0.24
ACTN1-221ENST00000556571 TEX2Q8IWB9 1127 aa13.57□□□□□ -0.24
ACTN1-221ENST00000556571 THNSL1Q8IYQ7 743 aa13.57□□□□□ -0.24
ACTN1-221ENST00000556571 CMTR1Q8N1G2 835 aaKnown RBP13.57□□□□□ -0.24
ACTN1-221ENST00000556571 VN1R2Q8NFZ6 395 aa13.57□□□□□ -0.24
ACTN1-221ENST00000556571 ASIC4Q96FT7 647 aa13.57□□□□□ -0.24
ACTN1-221ENST00000556571 TMEM87BQ96K49 555 aa13.57□□□□□ -0.24
ACTN1-221ENST00000556571 ADAM2Q99965 735 aa13.57□□□□□ -0.24
ACTN1-221ENST00000556571 TYW1Q9NV66 732 aaKnown RBP13.57□□□□□ -0.24
ACTN1-221ENST00000556571 TMEM260Q9NX78 707 aa13.57□□□□□ -0.24
ACTN1-221ENST00000556571 PUF60Q9UHX1 559 aaKnown RBP13.57□□□□□ -0.24
ACTN1-221ENST00000556571 GINS2Q9Y248 185 aa13.57□□□□□ -0.24
ACTN1-221ENST00000556571 LZTS1Q9Y250 596 aa13.57□□□□□ -0.24
ACTN1-221ENST00000556571 NOC2LQ9Y3T9 749 aaKnown RBP13.57□□□□□ -0.24
ACTN1-221ENST00000556571 RIF1Q5UIP0 2472 aaKnown RBP13.56□□□□□ -0.24
ACTN1-221ENST00000556571 hCG_1642624A0A1W2PR95 340 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 C9IYK1 514 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 SH2B2O14492 632 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-221ENST00000556571 FSCN2O14926 492 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 GPR182O15218 404 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 HBP1O60381 514 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 MGEA5O60502 916 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 PDE4AP27815 886 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 AVPR2P30518 371 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 LIFRP42702 1097 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 NUBP1P53384 320 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 RBM10P98175 930 aaKnown RBP13.56□□□□□ -0.24
ACTN1-221ENST00000556571 PTPN21Q16825 1174 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 CEP55Q53EZ4 464 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 FAM102BQ5T8I3 360 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 HEATR3Q7Z4Q2 680 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 KIAA0319LQ8IZA0 1049 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 CCDC82Q8N4S0 544 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 COLGALT1Q8NBJ5 622 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 CYP2W1Q8TAV3 490 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 RASGRP4Q8TDF6 673 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 S1PR5Q9H228 398 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 ATP6V0A4Q9HBG4 840 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 ST3GAL5Q9UNP4 418 aa13.56□□□□□ -0.24
ACTN1-221ENST00000556571 USP34Q70CQ2 3546 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 IGKV6D-21A0A0A0MT36 114 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 GFRA3O60609 400 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 FOSP01100 380 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-221ENST00000556571 ARP10275 920 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 HOXB8P17481 243 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-221ENST00000556571 LAG3P18627 525 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 RXRAP19793 462 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 TECP42680 631 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 FAM189BP81408 668 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 PLCB3Q01970 1234 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 ITGB3BPQ13352 177 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-221ENST00000556571 KCNC3Q14003 757 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 FAM160B1Q5W0V3 765 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 ANKRD54Q6NXT1 300 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 TMTC3Q6ZXV5 915 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 FANCBQ8NB91 859 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 EXOC6Q8TAG9 804 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 MRPS27Q92552 414 aaKnown RBP13.55□□□□□ -0.24
ACTN1-221ENST00000556571 ELAC1Q9H777 363 aaKnown RBP13.55□□□□□ -0.24
ACTN1-221ENST00000556571 CDHR5Q9HBB8 845 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 AGO4Q9HCK5 861 aaKnown RBP13.55□□□□□ -0.24
ACTN1-221ENST00000556571 NGRNQ9NPE2 291 aaKnown RBP13.55□□□□□ -0.24
ACTN1-221ENST00000556571 TMEM161AQ9NX61 479 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 RBM8AQ9Y5S9 174 aaKnown RBP13.55□□□□□ -0.24
ACTN1-221ENST00000556571 SLC12A7Q9Y666 1083 aa13.55□□□□□ -0.24
ACTN1-221ENST00000556571 MEIS1O00470 390 aa13.54□□□□□ -0.24
ACTN1-221ENST00000556571 BACH1O14867 736 aa13.54□□□□□ -0.24
ACTN1-221ENST00000556571 CRYBB1P53674 252 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-221ENST00000556571 VCPP55072 806 aaKnown RBP13.54□□□□□ -0.24
ACTN1-221ENST00000556571 ZNF484Q5JVG2 852 aa13.54□□□□□ -0.24
ACTN1-221ENST00000556571 SYCE2Q6PIF2 218 aa13.54□□□□□ -0.24
ACTN1-221ENST00000556571 ABHD15Q6UXT9 468 aa13.54□□□□□ -0.24
ACTN1-221ENST00000556571 ZBTB33Q86T24 672 aa13.54□□□□□ -0.24
ACTN1-221ENST00000556571 TMEM40Q8WWA1 233 aa13.54□□□□□ -0.24
ACTN1-221ENST00000556571 ATOH1Q92858 354 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-221ENST00000556571 CWH43Q9H720 699 aa13.54□□□□□ -0.24
ACTN1-221ENST00000556571 RIC8AQ9NPQ8 531 aa13.54□□□□□ -0.24
ACTN1-221ENST00000556571 COL1A2P08123 1366 aa13.54□□□□□ -0.24
ACTN1-221ENST00000556571 HOXA2O43364 376 aa13.53□□□□□ -0.24
ACTN1-221ENST00000556571 CCNE2O96020 404 aa13.53□□□□□ -0.24
ACTN1-221ENST00000556571 FGFR1P11362 822 aa13.53□□□□□ -0.24
ACTN1-221ENST00000556571 KRT17Q04695 432 aa13.53□□□□□ -0.24
ACTN1-221ENST00000556571 APOBRQ0VD83 1088 aa13.53□□□□□ -0.24
ACTN1-221ENST00000556571 PLPP4Q5VZY2 271 aa13.53□□□□□ -0.24
ACTN1-221ENST00000556571 RIPOR3Q96MK2 946 aa13.53□□□□□ -0.24
ACTN1-221ENST00000556571 TCF25Q9BQ70 676 aa13.53□□□□□ -0.24
ACTN1-221ENST00000556571 TMEM117Q9H0C3 514 aa13.53□□□□□ -0.24
ACTN1-221ENST00000556571 ENTPD7Q9NQZ7 604 aa13.53□□□□□ -0.24
ACTN1-221ENST00000556571 ZNF302Q9NR11 478 aa13.53□□□□□ -0.24
ACTN1-221ENST00000556571 FAM86C1Q9NVL1 165 aa13.53□□□□□ -0.24
ACTN1-221ENST00000556571 HCSTQ9UBK5 93 aa13.53□□□□□ -0.24
ACTN1-221ENST00000556571 NR2E1Q9Y466 385 aa13.53□□□□□ -0.24
ACTN1-221ENST00000556571 SPTBN4Q9H254 2564 aa13.53□□□□□ -0.24
ACTN1-221ENST00000556571 PPM1AP35813 382 aa13.52□□□□□ -0.25
ACTN1-221ENST00000556571 ZNF76P36508 570 aa13.52□□□□□ -0.25
ACTN1-221ENST00000556571 NAPAP54920 295 aa13.52□□□□□ -0.25
ACTN1-221ENST00000556571 KIZQ2M2Z5 673 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms