RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 UBE2Q1Q7Z7E8 422 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 TSPYL5Q86VY4 417 aaPredicted RBP3.07□□□□□ -1.92
CPSF6-207ENST00000551516 KSR1Q8IVT5 923 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 SHISA5Q8N114 240 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 AHI1Q8N157 1196 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 TMEM145Q8NBT3 493 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 SHKBP1Q8TBC3 707 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 NETO1Q8TDF5 533 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 CHAC2Q8WUX2 184 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 DCAF4Q8WV16 495 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 CELF1Q92879 486 aaKnown RBP3.07□□□□□ -1.92
CPSF6-207ENST00000551516 UBE2FQ969M7 185 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 MAGEB10Q96LZ2 347 aaPredicted RBP3.07□□□□□ -1.92
CPSF6-207ENST00000551516 CLUHP3Q96NS8 147 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 FCRL3Q96P31 734 aaPredicted RBP3.07□□□□□ -1.92
CPSF6-207ENST00000551516 DUSP15Q9H1R2 295 aaPredicted RBP3.07□□□□□ -1.92
CPSF6-207ENST00000551516 LRRC4CQ9HCJ2 640 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 INTS7Q9NVH2 962 aaKnown RBP3.07□□□□□ -1.92
CPSF6-207ENST00000551516 BABAM1Q9NWV8 329 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 ZSWIM5Q9P217 1185 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 MAGEC2Q9UBF1 373 aaPredicted RBP3.07□□□□□ -1.92
CPSF6-207ENST00000551516 SNX11Q9Y5W9 270 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 ST14Q9Y5Y6 855 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 PRUNE2Q8WUY3 3088 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 UNC80Q8N2C7 3258 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 TRBV23OR9-2A0A075B6M9 112 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 TMEM265A0A087WTH1 108 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 SSC5DA1L4H1 1573 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 STXBP3O00186 592 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 PSMD14O00487 310 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 CEP290O15078 2479 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 MEFVO15553 781 aaPredicted RBP3.06□□□□□ -1.92
CPSF6-207ENST00000551516 OPA1O60313 960 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 PDE8AO60658 829 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 RAD17O75943 681 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 CELF2O95319 508 aaKnown RBP3.06□□□□□ -1.92
CPSF6-207ENST00000551516 GDF11O95390 407 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 ANXA1P04083 346 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 ASLP04424 464 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 SYPP08247 313 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 GSTM1P09488 218 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 H2AFB1P0C5Y9 115 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 H2AFB2P0C5Z0 115 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 C6orf222P0C671 652 aaPredicted RBP3.06□□□□□ -1.92
CPSF6-207ENST00000551516 VAV1P15498 845 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 CPEP16870 476 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 PAMP19021 973 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 FSTP19883 344 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 SOX5P35711 763 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 IGFALSP35858 605 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 STAT3P40763 770 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 CTSKP43235 329 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 FXR1P51114 621 aaKnown RBP eCLIP3.06□□□□□ -1.92
CPSF6-207ENST00000551516 ST5P78524 1137 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 GPSM2P81274 684 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 KIF23Q02241 960 aaPredicted RBP3.06□□□□□ -1.92
CPSF6-207ENST00000551516 NOGQ13253 232 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 GRAPQ13588 217 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 DOC2BQ14184 412 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 IFI16Q16666 785 aaKnown RBP3.06□□□□□ -1.92
CPSF6-207ENST00000551516 NKPD1Q17RQ9 610 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 PRSS53Q2L4Q9 553 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 PLA2G4EQ3MJ16 856 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 SLC35F1Q5T1Q4 408 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 E4F1Q66K89 784 aaPredicted RBP3.06□□□□□ -1.92
CPSF6-207ENST00000551516 RGMBQ6NW40 437 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 RSPO2Q6UXX9 243 aaPredicted RBP3.06□□□□□ -1.92
CPSF6-207ENST00000551516 RNF111Q6ZNA4 994 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 MOB2Q70IA6 237 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 RASAL3Q86YV0 1011 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 PPIL6Q8IXY8 311 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 IFNL3Q8IZI9 196 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 TMEM151AQ8N4L1 468 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 FAM181AQ8N9Y4 354 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 TBC1D16Q8TBP0 767 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 GRAPLQ8TC17 118 aaPredicted RBP3.06□□□□□ -1.92
CPSF6-207ENST00000551516 COPS5Q92905 334 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 HSPA12BQ96MM6 686 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 PTPN18Q99952 460 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 CAAP1Q9H8G2 361 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 GPRC5CQ9NQ84 441 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 DUSP13Q9UII6 198 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 CNOT7Q9UIV1 285 aaKnown RBP3.06□□□□□ -1.92
CPSF6-207ENST00000551516 TCFL5Q9UL49 500 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 EYSQ5T1H1 3165 aa3.06□□□□□ -1.92
CPSF6-207ENST00000551516 TTC28Q96AY4 2481 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 TRIOBPQ9H2D6 2365 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 CCDC88AQ3V6T2 1871 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 LRRC37AA6NMS7 1700 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 A0A087X0B3 334 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.05□□□□□ -1.92
CPSF6-207ENST00000551516 BLACEA4D250 179 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 B4E1Z4 1266 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 ADM5C9JUS6 153 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 RBAK-RBAKDNI3L0D1 243 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 ZNF205O95201 554 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 TBC1D8O95759 1140 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 IGKV5-2P06315 115 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 THBDP07204 575 aa3.05□□□□□ -1.92
CPSF6-207ENST00000551516 IFNGR1P15260 489 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 742 ms