RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 TREHO43280 583 aa18.21■□□□□ 0.51
LIMS2-217ENST00000545738 PDILTQ8N807 584 aa18.21■□□□□ 0.51
LIMS2-217ENST00000545738 C7orf31Q8N865 590 aa18.21■□□□□ 0.51
LIMS2-217ENST00000545738 TMEM87AQ8NBN3 555 aa18.21■□□□□ 0.51
LIMS2-217ENST00000545738 NIFKQ9BYG3 293 aaKnown RBP18.21■□□□□ 0.51
LIMS2-217ENST00000545738 DDX11L8A8MPP1 907 aa18.2■□□□□ 0.5
LIMS2-217ENST00000545738 HBP1O60381 514 aa18.2■□□□□ 0.5
LIMS2-217ENST00000545738 RARRES1P49788 294 aa18.2■□□□□ 0.5
LIMS2-217ENST00000545738 E2F4Q16254 413 aa18.2■□□□□ 0.5
LIMS2-217ENST00000545738 MTERF2Q49AM1 385 aa18.2■□□□□ 0.5
LIMS2-217ENST00000545738 C1orf53Q5VUE5 145 aa18.2■□□□□ 0.5
LIMS2-217ENST00000545738 BMP2KQ9NSY1 1161 aaPredicted RBP18.2■□□□□ 0.5
LIMS2-217ENST00000545738 MBLAC1A4D2B0 266 aaPredicted RBP18.2■□□□□ 0.5
LIMS2-217ENST00000545738 PQBP1O60828 265 aaKnown RBP18.2■□□□□ 0.5
LIMS2-217ENST00000545738 C22orf31O95567 290 aa18.2■□□□□ 0.5
LIMS2-217ENST00000545738 PFKFB1P16118 471 aa18.2■□□□□ 0.5
LIMS2-217ENST00000545738 DRP2Q13474 957 aa18.2■□□□□ 0.5
LIMS2-217ENST00000545738 RUFY4Q6ZNE9 571 aa18.2■□□□□ 0.5
LIMS2-217ENST00000545738 DHX38Q92620 1227 aaKnown RBP18.2■□□□□ 0.5
LIMS2-217ENST00000545738 ANP32EQ9BTT0 268 aa18.2■□□□□ 0.5
LIMS2-217ENST00000545738 CYP26B1Q9NR63 512 aa18.2■□□□□ 0.5
LIMS2-217ENST00000545738 HPSEQ9Y251 543 aa18.2■□□□□ 0.5
LIMS2-217ENST00000545738 NRCAMQ92823 1304 aa18.19■□□□□ 0.5
LIMS2-217ENST00000545738 CD4P01730 458 aa18.19■□□□□ 0.5
LIMS2-217ENST00000545738 CAPN2P17655 700 aa18.19■□□□□ 0.5
LIMS2-217ENST00000545738 CMA1P23946 247 aa18.19■□□□□ 0.5
LIMS2-217ENST00000545738 NDUFA8P51970 172 aa18.19■□□□□ 0.5
LIMS2-217ENST00000545738 RTP1P59025 263 aa18.19■□□□□ 0.5
LIMS2-217ENST00000545738 TLE2Q04725 743 aa18.19■□□□□ 0.5
LIMS2-217ENST00000545738 ANKRD33Q7Z3H0 272 aa18.19■□□□□ 0.5
LIMS2-217ENST00000545738 FAM167AQ96KS9 214 aa18.19■□□□□ 0.5
LIMS2-217ENST00000545738 BHMT2Q9H2M3 363 aa18.19■□□□□ 0.5
LIMS2-217ENST00000545738 KDM3AQ9Y4C1 1321 aa18.19■□□□□ 0.5
LIMS2-217ENST00000545738 FAM237AA0A1B0GTK4 181 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 C17orf102A2RUQ5 167 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 MUTP22033 750 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 MKRN4PQ13434 485 aaPredicted RBP18.18■□□□□ 0.5
LIMS2-217ENST00000545738 CEP170P1Q96L14 293 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 NACC1Q96RE7 527 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 POLD4Q9HCU8 107 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 XPNPEP1Q9NQW7 623 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 TUBE1Q9UJT0 475 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 ATP11BQ9Y2G3 1177 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 LOXHD1Q8IVV2 1947 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 SIP14410 1827 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 LAMA3Q16787 3333 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 A0A1W2PQ27 194 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 A0A1W2PQ64 194 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 A0A1W2PQD8 194 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 CYP2C9P11712 490 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 KLRC1P26715 233 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 FAAP100Q0VG06 881 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 PTGISQ16647 500 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 XKR9Q5GH70 373 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 MTHFD1LQ6UB35 978 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 LINC01465Q8N7H1 131 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 MTRQ99707 1265 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 NRBP2Q9NSY0 501 aa18.18■□□□□ 0.5
LIMS2-217ENST00000545738 DBR1Q9UK59 544 aaKnown RBP18.18■□□□□ 0.5
LIMS2-217ENST00000545738 COL1A2P08123 1366 aa18.17■□□□□ 0.5
LIMS2-217ENST00000545738 PRPF40AO75400 957 aaKnown RBP18.17■□□□□ 0.5
LIMS2-217ENST00000545738 EYA4O95677 639 aa18.17■□□□□ 0.5
LIMS2-217ENST00000545738 SLC12A3P55017 1021 aa18.17■□□□□ 0.5
LIMS2-217ENST00000545738 MCM6Q14566 821 aa18.17■□□□□ 0.5
LIMS2-217ENST00000545738 ZNF484Q5JVG2 852 aa18.17■□□□□ 0.5
LIMS2-217ENST00000545738 SH3RF1Q7Z6J0 888 aa18.17■□□□□ 0.5
LIMS2-217ENST00000545738 LRRC71Q8N4P6 559 aa18.17■□□□□ 0.5
LIMS2-217ENST00000545738 FSIP1Q8NA03 581 aa18.17■□□□□ 0.5
LIMS2-217ENST00000545738 CALML4Q96GE6 196 aa18.17■□□□□ 0.5
LIMS2-217ENST00000545738 RUSC1Q9BVN2 902 aa18.17■□□□□ 0.5
LIMS2-217ENST00000545738 NT5C3AQ9H0P0 336 aa18.17■□□□□ 0.5
LIMS2-217ENST00000545738 DHX33Q9H6R0 707 aaKnown RBP18.17■□□□□ 0.5
LIMS2-217ENST00000545738 PDLIM7Q9NR12 457 aa18.17■□□□□ 0.5
LIMS2-217ENST00000545738 ANKEF1Q9NU02 776 aa18.17■□□□□ 0.5
LIMS2-217ENST00000545738 KCNH3Q9ULD8 1083 aa18.17■□□□□ 0.5
LIMS2-217ENST00000545738 STK24Q9Y6E0 443 aa18.17■□□□□ 0.5
LIMS2-217ENST00000545738 IGKV6-21A0A0C4DH24 114 aa18.16■□□□□ 0.5
LIMS2-217ENST00000545738 POLR2DO15514 142 aaKnown RBP18.16■□□□□ 0.5
LIMS2-217ENST00000545738 DKC1O60832 514 aaKnown RBP eCLIP18.16■□□□□ 0.5
LIMS2-217ENST00000545738 CLCN3P51790 818 aa18.16■□□□□ 0.5
LIMS2-217ENST00000545738 PTPN11Q06124 597 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-217ENST00000545738 TRIM71Q2Q1W2 868 aaKnown RBP18.16■□□□□ 0.5
LIMS2-217ENST00000545738 SERINC5Q86VE9 423 aa18.16■□□□□ 0.5
LIMS2-217ENST00000545738 MRPS27Q92552 414 aaKnown RBP18.16■□□□□ 0.5
LIMS2-217ENST00000545738 RAD54LQ92698 747 aa18.16■□□□□ 0.5
LIMS2-217ENST00000545738 DHX58Q96C10 678 aa18.16■□□□□ 0.5
LIMS2-217ENST00000545738 CDK5RAP3Q96JB5 506 aa18.16■□□□□ 0.5
LIMS2-217ENST00000545738 DNM3Q9UQ16 869 aa18.16■□□□□ 0.5
LIMS2-217ENST00000545738 UMODL1Q5DID0 1318 aa18.16■□□□□ 0.5
LIMS2-217ENST00000545738 USO1O60763 962 aaKnown RBP18.15■□□□□ 0.5
LIMS2-217ENST00000545738 CAPN15O75808 1086 aa18.15■□□□□ 0.5
LIMS2-217ENST00000545738 PLA2G4BP0C869 781 aa18.15■□□□□ 0.5
LIMS2-217ENST00000545738 XRCC6P12956 609 aaKnown RBP eCLIP18.15■□□□□ 0.5
LIMS2-217ENST00000545738 LIG1P18858 919 aa18.15■□□□□ 0.5
LIMS2-217ENST00000545738 ITGB8P26012 769 aa18.15■□□□□ 0.5
LIMS2-217ENST00000545738 SNW1Q13573 536 aaKnown RBP18.15■□□□□ 0.5
LIMS2-217ENST00000545738 ARSHQ5FYA8 562 aa18.15■□□□□ 0.5
LIMS2-217ENST00000545738 ENGASEQ8NFI3 743 aa18.15■□□□□ 0.5
LIMS2-217ENST00000545738 RASSF8Q8NHQ8 419 aa18.15■□□□□ 0.5
LIMS2-217ENST00000545738 STAMQ92783 540 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms