RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 TMEM139Q8IV31 216 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 BBOF1Q8ND07 529 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 POMGNT1Q8WZA1 660 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 KLHL29Q96CT2 875 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 HOOK2Q96ED9 719 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 ACCSQ96QU6 501 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 CSRNP1Q96S65 589 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 CCT8L2Q96SF2 557 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 KCNG1Q9UIX4 513 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 NOC2LQ9Y3T9 749 aaKnown RBP8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 TOPAZ1Q8N9V7 1692 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 TESPA1A2RU30 521 aaPredicted RBP8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 PDE6BP35913 854 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 ADCY2Q08462 1091 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 TRPC3Q13507 836 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 NAB2Q15742 525 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 SPATA20Q8TB22 786 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 P3H4Q92791 437 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 ARHGEF2Q92974 986 aaKnown RBP8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 STMN2Q93045 179 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 ELAC2Q9BQ52 826 aaKnown RBP8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 EPN3Q9H201 632 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 EHD2Q9NZN4 543 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 ARHGAP20Q9P2F6 1191 aa8.88□□□□□ -0.99
PRKAB1-207ENST00000542698 PDXKO00764 312 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 PDHBP11177 359 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 SMARCA1P28370 1054 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 MAN1A1P33908 653 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 FXR2P51116 673 aaKnown RBP eCLIP8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 STAT2P52630 851 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 BPIFB4P59827 614 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 ZNF211Q13398 564 aaPredicted RBP8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 NEDD9Q14511 834 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 ANKRD20A3Q5VUR7 823 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 INTS5Q6P9B9 1019 aaKnown RBP8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 MICAL1Q8TDZ2 1067 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 DBNDD1Q9H9R9 158 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 ESYT2A0FGR8 921 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 TCP10L2B9ZVM9 353 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 NEBLO76041 1014 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 MMEP08473 750 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 RPSAP08865 295 aaKnown RBP8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 ACTN1P12814 892 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 ATF7P17544 494 aaPredicted RBP8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 LSP1P33241 339 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 ZNF543Q08ER8 600 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 DMP1Q13316 513 aaPredicted RBP8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 ZKSCAN8Q15776 578 aaPredicted RBP8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 EDRF1Q3B7T1 1238 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 FAM133BQ5BKY9 247 aaKnown RBP8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 LMNTD2Q8IXW0 634 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 MCUR1Q96AQ8 359 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 A0A087X0T9 212 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 FAM228BP0C875 321 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 CD19P15391 556 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 SLC9A1P19634 815 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 GUCY2CP25092 1073 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 KLRK1P26718 216 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 CACNB3P54284 484 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 TBC1D10BQ4KMP7 808 aaPredicted RBP8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 CAPN12Q6ZSI9 719 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 TMEM179Q6ZVK1 233 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 C16orf86Q6ZW13 317 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 SYN2Q92777 582 aaPredicted RBP8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 SEMA6BQ9H3T3 888 aa8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.87□□□□□ -0.99
PRKAB1-207ENST00000542698 SYNGAP1Q96PV0 1343 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 ARHGAP23Q9P227 1491 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 NPHP3-ACAD11A0A0J9YXS1 232 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 F5H6K3 240 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 FOXP2O15409 715 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 ZBED4O75132 1171 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 RWDD2BP57060 319 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 PPP4CP60510 307 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 GPC5P78333 572 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 IL9RQ01113 521 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 KLRC3Q07444 240 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 ADCY1Q08828 1119 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 NUGGCQ68CJ6 796 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 CC2D2BQ6DHV5 1058 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 CYP4F22Q6NT55 531 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 VPS52Q8N1B4 723 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 ANKRD35Q8N283 1001 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 RFFLQ8WZ73 363 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 ANAPC5Q9UJX4 755 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 CCPG1Q9ULG6 757 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 ABCB11O95342 1321 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 FLT1P17948 1338 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 FAM196BA6NMK8 535 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 SMIM22K7EJ46 135 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 HNRNPDLO14979 420 aaKnown RBP8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 RAD51CO43502 376 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 ACSL3O95573 720 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 LIG4P49917 911 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 SEC24CP53992 1094 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 GRB10Q13322 594 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 EZH2Q15910 746 aaKnown RBP8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 ARHGEF18Q6ZSZ5 1173 aa8.86□□□□□ -0.99
PRKAB1-207ENST00000542698 MCF2L2Q86YR7 1114 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms