RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ADAM2Q99965 735 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 MXRA8Q9BRK3 442 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 APOL5Q9BWW9 433 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 CDHR5Q9HBB8 845 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 AAASQ9NRG9 546 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 TMEM260Q9NX78 707 aa16■□□□□ 0.15
SMARCA4-206ENST00000538456 NOC2LQ9Y3T9 749 aaKnown RBP16■□□□□ 0.15
SMARCA4-206ENST00000538456 ZFHX2Q9C0A1 2572 aaPredicted RBP16■□□□□ 0.15
SMARCA4-206ENST00000538456 MYO15AQ9UKN7 3530 aa15.99■□□□□ 0.15
SMARCA4-206ENST00000538456 DDX39AO00148 427 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-206ENST00000538456 RPS6KA5O75582 802 aa15.99■□□□□ 0.15
SMARCA4-206ENST00000538456 ARP10275 920 aa15.99■□□□□ 0.15
SMARCA4-206ENST00000538456 KLRC1P26715 233 aa15.99■□□□□ 0.15
SMARCA4-206ENST00000538456 UBE3AQ05086 875 aa15.99■□□□□ 0.15
SMARCA4-206ENST00000538456 APOBRQ0VD83 1088 aa15.99■□□□□ 0.15
SMARCA4-206ENST00000538456 ITGB3BPQ13352 177 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-206ENST00000538456 DUSP6Q16828 381 aa15.99■□□□□ 0.15
SMARCA4-206ENST00000538456 PLPP4Q5VZY2 271 aa15.99■□□□□ 0.15
SMARCA4-206ENST00000538456 COLGALT1Q8NBJ5 622 aa15.99■□□□□ 0.15
SMARCA4-206ENST00000538456 ATP8B4Q8TF62 1192 aa15.99■□□□□ 0.15
SMARCA4-206ENST00000538456 SUSD6Q92537 303 aa15.99■□□□□ 0.15
SMARCA4-206ENST00000538456 MAP4K1Q92918 833 aa15.99■□□□□ 0.15
SMARCA4-206ENST00000538456 ERVK-5Q9HDB9 667 aa15.99■□□□□ 0.15
SMARCA4-206ENST00000538456 TYW1Q9NV66 732 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-206ENST00000538456 NFASCO94856 1347 aa15.98■□□□□ 0.15
SMARCA4-206ENST00000538456 BACH1O14867 736 aa15.98■□□□□ 0.15
SMARCA4-206ENST00000538456 CALM1P0DP23 149 aa15.98■□□□□ 0.15
SMARCA4-206ENST00000538456 CALM2P0DP24 149 aa15.98■□□□□ 0.15
SMARCA4-206ENST00000538456 CALM3P0DP25 149 aa15.98■□□□□ 0.15
SMARCA4-206ENST00000538456 FGFR1P11362 822 aa15.98■□□□□ 0.15
SMARCA4-206ENST00000538456 ATF7P17544 494 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-206ENST00000538456 MCM5P33992 734 aa15.98■□□□□ 0.15
SMARCA4-206ENST00000538456 LLGL2Q6P1M3 1020 aa15.98■□□□□ 0.15
SMARCA4-206ENST00000538456 ZBTB33Q86T24 672 aa15.98■□□□□ 0.15
SMARCA4-206ENST00000538456 MICU3Q86XE3 530 aa15.98■□□□□ 0.15
SMARCA4-206ENST00000538456 NME8Q8N427 588 aa15.98■□□□□ 0.15
SMARCA4-206ENST00000538456 ASIC4Q96FT7 647 aa15.98■□□□□ 0.15
SMARCA4-206ENST00000538456 LRRC2Q9BYS8 371 aa15.98■□□□□ 0.15
SMARCA4-206ENST00000538456 RGS18Q9NS28 235 aa15.98■□□□□ 0.15
SMARCA4-206ENST00000538456 ST3GAL5Q9UNP4 418 aa15.98■□□□□ 0.15
SMARCA4-206ENST00000538456 SLC12A7Q9Y666 1083 aa15.98■□□□□ 0.15
SMARCA4-206ENST00000538456 MYH9P35579 1960 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 C9IYK1 514 aa15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 ST18O60284 1047 aa15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 GFRA3O60609 400 aa15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 SRGAP2BP0DMP2 458 aa15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 TECP42680 631 aa15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 PTPN21Q16825 1174 aa15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 KIZQ2M2Z5 673 aa15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 WWC2Q6AWC2 1192 aa15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 TMTC3Q6ZXV5 915 aa15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 SLC24A5Q71RS6 500 aa15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 KIAA0319LQ8IZA0 1049 aa15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 TMTC2Q8N394 836 aa15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 TMEM87BQ96K49 555 aa15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 CDCA3Q99618 268 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 AGO4Q9HCK5 861 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 ENTPD7Q9NQZ7 604 aa15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 TSHZ2Q9NRE2 1034 aa15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 C1orf112Q9NSG2 853 aa15.97■□□□□ 0.15
SMARCA4-206ENST00000538456 FSD2A1L4K1 749 aa15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 FSCN2O14926 492 aa15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 CCNE2O96020 404 aa15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 PDGFBP01127 241 aaPredicted RBP15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 SLC26A2P50443 739 aa15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 NAPAP54920 295 aa15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 CEP55Q53EZ4 464 aa15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 TYW1BQ6NUM6 668 aa15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 ANKRD54Q6NXT1 300 aa15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 CCDC60Q8IWA6 550 aaPredicted RBP15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 FANCBQ8NB91 859 aa15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 ATOH1Q92858 354 aaPredicted RBP15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 OSMRQ99650 979 aa15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 TCF25Q9BQ70 676 aa15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 MTA3Q9BTC8 594 aa15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 ATP6V0A4Q9HBG4 840 aa15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 RNF216Q9NWF9 866 aaPredicted RBP15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 CDH22Q9UJ99 828 aa15.96■□□□□ 0.15
SMARCA4-206ENST00000538456 MYO10Q9HD67 2058 aa15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 HIDE1A8MVS5 230 aa15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 GPR182O15218 404 aa15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 HBP1O60381 514 aa15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 ATG7O95352 703 aa15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 LAG3P18627 525 aa15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 AVPR2P30518 371 aa15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 PBX3P40426 434 aa15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 ADCY7P51828 1080 aa15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 FAM160B1Q5W0V3 765 aa15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 PDE12Q6L8Q7 609 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 PDXDC2PQ6P474 469 aa15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 TRMT1LQ7Z2T5 733 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 FAM228AQ86W67 206 aa15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 ANO3Q9BYT9 981 aa15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 S1PR5Q9H228 398 aa15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 CWH43Q9H720 699 aa15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 RIC8AQ9NPQ8 531 aa15.95■□□□□ 0.14
SMARCA4-206ENST00000538456 CNTNAP5Q8WYK1 1306 aa15.94■□□□□ 0.14
SMARCA4-206ENST00000538456 IGKV6D-21A0A0A0MT36 114 aa15.94■□□□□ 0.14
SMARCA4-206ENST00000538456 ZBTB42B2RXF5 422 aa15.94■□□□□ 0.14
SMARCA4-206ENST00000538456 VTNP04004 478 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms