RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 SLC24A5Q71RS6 500 aa14.88□□□□□ -0.03
COPB1-209ENST00000533096 CKAP2LQ8IYA6 745 aa14.88□□□□□ -0.03
COPB1-209ENST00000533096 KIAA0319LQ8IZA0 1049 aa14.88□□□□□ -0.03
COPB1-209ENST00000533096 TMTC2Q8N394 836 aa14.88□□□□□ -0.03
COPB1-209ENST00000533096 ATP8B4Q8TF62 1192 aa14.88□□□□□ -0.03
COPB1-209ENST00000533096 LRRC2Q9BYS8 371 aa14.88□□□□□ -0.03
COPB1-209ENST00000533096 ERVK-5Q9HDB9 667 aa14.88□□□□□ -0.03
COPB1-209ENST00000533096 ENTPD7Q9NQZ7 604 aa14.88□□□□□ -0.03
COPB1-209ENST00000533096 RBM8AQ9Y5S9 174 aaKnown RBP14.88□□□□□ -0.03
COPB1-209ENST00000533096 MICAL3Q7RTP6 2002 aa14.87□□□□□ -0.03
COPB1-209ENST00000533096 GPR182O15218 404 aa14.87□□□□□ -0.03
COPB1-209ENST00000533096 MCM5P33992 734 aa14.87□□□□□ -0.03
COPB1-209ENST00000533096 UBE3AQ05086 875 aa14.87□□□□□ -0.03
COPB1-209ENST00000533096 KIZQ2M2Z5 673 aa14.87□□□□□ -0.03
COPB1-209ENST00000533096 SWSAP1Q6NVH7 229 aa14.87□□□□□ -0.03
COPB1-209ENST00000533096 ANKRD54Q6NXT1 300 aa14.87□□□□□ -0.03
COPB1-209ENST00000533096 METTL13Q8N6R0 699 aa14.87□□□□□ -0.03
COPB1-209ENST00000533096 FANCBQ8NB91 859 aa14.87□□□□□ -0.03
COPB1-209ENST00000533096 COLGALT1Q8NBJ5 622 aa14.87□□□□□ -0.03
COPB1-209ENST00000533096 RNF169Q8NCN4 708 aa14.87□□□□□ -0.03
COPB1-209ENST00000533096 TMEM40Q8WWA1 233 aa14.87□□□□□ -0.03
COPB1-209ENST00000533096 TCF25Q9BQ70 676 aa14.87□□□□□ -0.03
COPB1-209ENST00000533096 S1PR5Q9H228 398 aa14.87□□□□□ -0.03
COPB1-209ENST00000533096 AGO4Q9HCK5 861 aaKnown RBP14.87□□□□□ -0.03
COPB1-209ENST00000533096 RGS18Q9NS28 235 aa14.87□□□□□ -0.03
COPB1-209ENST00000533096 CDH22Q9UJ99 828 aa14.87□□□□□ -0.03
COPB1-209ENST00000533096 SLC12A7Q9Y666 1083 aa14.87□□□□□ -0.03
COPB1-209ENST00000533096 HIDE1A8MVS5 230 aa14.86□□□□□ -0.03
COPB1-209ENST00000533096 SRGAP2BP0DMP2 458 aa14.86□□□□□ -0.03
COPB1-209ENST00000533096 ATF7P17544 494 aaPredicted RBP14.86□□□□□ -0.03
COPB1-209ENST00000533096 PBX3P40426 434 aa14.86□□□□□ -0.03
COPB1-209ENST00000533096 ITGB3BPQ13352 177 aaPredicted RBP14.86□□□□□ -0.03
COPB1-209ENST00000533096 PTPN21Q16825 1174 aa14.86□□□□□ -0.03
COPB1-209ENST00000533096 FAM160B1Q5W0V3 765 aa14.86□□□□□ -0.03
COPB1-209ENST00000533096 PDXDC2PQ6P474 469 aa14.86□□□□□ -0.03
COPB1-209ENST00000533096 TMC7Q7Z402 723 aa14.86□□□□□ -0.03
COPB1-209ENST00000533096 SUSD6Q92537 303 aa14.86□□□□□ -0.03
COPB1-209ENST00000533096 MAP4K1Q92918 833 aa14.86□□□□□ -0.03
COPB1-209ENST00000533096 ASIC4Q96FT7 647 aa14.86□□□□□ -0.03
COPB1-209ENST00000533096 YTHDC1Q96MU7 727 aaKnown RBP14.86□□□□□ -0.03
COPB1-209ENST00000533096 C1orf112Q9NSG2 853 aa14.86□□□□□ -0.03
COPB1-209ENST00000533096 RNF216Q9NWF9 866 aaPredicted RBP14.86□□□□□ -0.03
COPB1-209ENST00000533096 MYO7AQ13402 2215 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 C9IYK1 514 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 SH2B2O14492 632 aaPredicted RBP14.85□□□□□ -0.03
COPB1-209ENST00000533096 SGSM2O43147 1006 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 HBP1O60381 514 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 CCNE2O96020 404 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 VTNP04004 478 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 CALM1P0DP23 149 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 CALM2P0DP24 149 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 CALM3P0DP25 149 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 NAPAP54920 295 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 KRT17Q04695 432 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 COL9A3Q14050 684 aaPredicted RBP14.85□□□□□ -0.03
COPB1-209ENST00000533096 CEP55Q53EZ4 464 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 ODR4Q5SWX8 454 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 PDE12Q6L8Q7 609 aaKnown RBP14.85□□□□□ -0.03
COPB1-209ENST00000533096 SYCE2Q6PIF2 218 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 SYNE3Q6ZMZ3 975 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 KREMEN2Q8NCW0 462 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 MRPS27Q92552 414 aaKnown RBP14.85□□□□□ -0.03
COPB1-209ENST00000533096 ZNF668Q96K58 619 aaPredicted RBP14.85□□□□□ -0.03
COPB1-209ENST00000533096 RIPOR3Q96MK2 946 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 CDCA3Q99618 268 aaPredicted RBP14.85□□□□□ -0.03
COPB1-209ENST00000533096 OSMRQ99650 979 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 CWH43Q9H720 699 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 ZNF302Q9NR11 478 aa14.85□□□□□ -0.03
COPB1-209ENST00000533096 V9GY48 417 aaPredicted RBP14.85□□□□□ -0.03
COPB1-209ENST00000533096 COL4A6Q14031 1691 aa14.84□□□□□ -0.03
COPB1-209ENST00000533096 PIEZO1Q92508 2521 aa14.84□□□□□ -0.03
COPB1-209ENST00000533096 ATG7O95352 703 aa14.84□□□□□ -0.03
COPB1-209ENST00000533096 WEE2P0C1S8 567 aa14.84□□□□□ -0.03
COPB1-209ENST00000533096 LAG3P18627 525 aa14.84□□□□□ -0.03
COPB1-209ENST00000533096 CRYBB1P53674 252 aaPredicted RBP14.84□□□□□ -0.03
COPB1-209ENST00000533096 FAM189BP81408 668 aa14.84□□□□□ -0.03
COPB1-209ENST00000533096 ZNF484Q5JVG2 852 aa14.84□□□□□ -0.03
COPB1-209ENST00000533096 ABHD15Q6UXT9 468 aa14.84□□□□□ -0.03
COPB1-209ENST00000533096 LRRC55Q6ZSA7 311 aa14.84□□□□□ -0.03
COPB1-209ENST00000533096 MICU3Q86XE3 530 aa14.84□□□□□ -0.03
COPB1-209ENST00000533096 ABI1Q8IZP0 508 aa14.84□□□□□ -0.03
COPB1-209ENST00000533096 TMEM87BQ96K49 555 aa14.84□□□□□ -0.03
COPB1-209ENST00000533096 IRF2BPLQ9H1B7 796 aa14.84□□□□□ -0.03
COPB1-209ENST00000533096 NFASCO94856 1347 aa14.84□□□□□ -0.03
COPB1-209ENST00000533096 KDM3AQ9Y4C1 1321 aa14.84□□□□□ -0.03
COPB1-209ENST00000533096 SMCO2A6NFE2 343 aa14.83□□□□□ -0.04
COPB1-209ENST00000533096 MEIS1O00470 390 aa14.83□□□□□ -0.04
COPB1-209ENST00000533096 FSCN2O14926 492 aa14.83□□□□□ -0.04
COPB1-209ENST00000533096 ZSCAN20P17040 1043 aaPredicted RBP14.83□□□□□ -0.04
COPB1-209ENST00000533096 SLC26A2P50443 739 aa14.83□□□□□ -0.04
COPB1-209ENST00000533096 WWC2Q6AWC2 1192 aa14.83□□□□□ -0.04
COPB1-209ENST00000533096 CES5AQ6NT32 575 aa14.83□□□□□ -0.04
COPB1-209ENST00000533096 KANK3Q6NY19 840 aa14.83□□□□□ -0.04
COPB1-209ENST00000533096 MIS18BP1Q6P0N0 1132 aa14.83□□□□□ -0.04
COPB1-209ENST00000533096 KCNT2Q6UVM3 1135 aa14.83□□□□□ -0.04
COPB1-209ENST00000533096 TMTC3Q6ZXV5 915 aa14.83□□□□□ -0.04
COPB1-209ENST00000533096 FAM228AQ86W67 206 aa14.83□□□□□ -0.04
COPB1-209ENST00000533096 PLA2G4DQ86XP0 818 aa14.83□□□□□ -0.04
COPB1-209ENST00000533096 C12orf76Q8N812 135 aaPredicted RBP14.83□□□□□ -0.04
COPB1-209ENST00000533096 TMEM87AQ8NBN3 555 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms