RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 PCDHB12Q9Y5F1 795 aa14.06□□□□□ -0.16
SAMM50-205ENST00000493621 CNTNAP5Q8WYK1 1306 aa14.06□□□□□ -0.16
SAMM50-205ENST00000493621 WDR81Q562E7 1941 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 IGKV6D-21A0A0A0MT36 114 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 DENND3A2RUS2 1198 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 TMEM221A6NGB7 291 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 LOC730098B7Z3J9 87 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 M0R296 226 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 PER2O15055 1255 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 HBP1O60381 514 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 CCNE2O96020 404 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 ZNF76P36508 570 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 SLC26A2P50443 739 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 RBM10P98175 930 aaKnown RBP14.05□□□□□ -0.16
SAMM50-205ENST00000493621 FAM102BQ5T8I3 360 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 FAM160B1Q5W0V3 765 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 PPP1R18Q6NYC8 613 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 TRIM67Q6ZTA4 783 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 SGMS1Q86VZ5 419 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 KIAA0319LQ8IZA0 1049 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 TMEM40Q8WWA1 233 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 PBXIP1Q96AQ6 731 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 PPP1R16BQ96T49 567 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 ADAM2Q99965 735 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 ESYT1Q9BSJ8 1104 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 TLR9Q9NR96 1032 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 AAASQ9NRG9 546 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 HCSTQ9UBK5 93 aa14.05□□□□□ -0.16
SAMM50-205ENST00000493621 KMT2EQ8IZD2 1858 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 SMCO2A6NFE2 343 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 MEIS1O00470 390 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 FGF18O76093 207 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 SREBF1P36956 1147 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 ZXDAP98168 799 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 UBE3AQ05086 875 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 NECTIN1Q15223 517 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 PDXDC2PQ6P474 469 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 APOA5Q6Q788 366 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 ABHD15Q6UXT9 468 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 BMP8AQ7Z5Y6 402 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 CCDC60Q8IWA6 550 aaPredicted RBP14.04□□□□□ -0.16
SAMM50-205ENST00000493621 THNSL1Q8IYQ7 743 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 ATP8B4Q8TF62 1192 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 RPGRIP1Q96KN7 1286 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 ANO2Q9NQ90 1003 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 ZNF302Q9NR11 478 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 RGS18Q9NS28 235 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 C1orf112Q9NSG2 853 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 RBM28Q9NW13 759 aaKnown RBP14.04□□□□□ -0.16
SAMM50-205ENST00000493621 RNF216Q9NWF9 866 aaPredicted RBP14.04□□□□□ -0.16
SAMM50-205ENST00000493621 ST3GAL5Q9UNP4 418 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 V9GY48 417 aaPredicted RBP14.04□□□□□ -0.16
SAMM50-205ENST00000493621 COL1A2P08123 1366 aa14.04□□□□□ -0.16
SAMM50-205ENST00000493621 C9IYK1 514 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 GPR182O15218 404 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 ERVFC1P60507 584 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 IRX6P78412 446 aaPredicted RBP14.03□□□□□ -0.16
SAMM50-205ENST00000493621 AP3B2Q13367 1082 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 CBX2Q14781 532 aaPredicted RBP14.03□□□□□ -0.16
SAMM50-205ENST00000493621 RTN1Q16799 776 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 DUSP6Q16828 381 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 KIZQ2M2Z5 673 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 ZNF484Q5JVG2 852 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 ODR4Q5SWX8 454 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 IER5LQ5T953 404 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 SWSAP1Q6NVH7 229 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 MIS18BP1Q6P0N0 1132 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 SLC24A5Q71RS6 500 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 PLA2G4DQ86XP0 818 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 COLGALT1Q8NBJ5 622 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 PRSS33Q8NF86 280 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 VN1R2Q8NFZ6 395 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 TCEANC2Q96MN5 208 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 PHOX2BQ99453 314 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 OSMRQ99650 979 aa14.03□□□□□ -0.16
SAMM50-205ENST00000493621 PHF7Q9BWX1 381 aaPredicted RBP14.03□□□□□ -0.16
SAMM50-205ENST00000493621 TYW1Q9NV66 732 aaKnown RBP14.03□□□□□ -0.16
SAMM50-205ENST00000493621 ZBTB42B2RXF5 422 aa14.02□□□□□ -0.17
SAMM50-205ENST00000493621 FAM86B1E9PN63 330 aa14.02□□□□□ -0.17
SAMM50-205ENST00000493621 ZBTB43O43298 467 aa14.02□□□□□ -0.17
SAMM50-205ENST00000493621 FAM86B2P0C5J1 330 aa14.02□□□□□ -0.17
SAMM50-205ENST00000493621 FGFR1P11362 822 aa14.02□□□□□ -0.17
SAMM50-205ENST00000493621 ATP4AP20648 1035 aa14.02□□□□□ -0.17
SAMM50-205ENST00000493621 CLK2P49760 499 aaKnown RBP14.02□□□□□ -0.17
SAMM50-205ENST00000493621 FUT2Q10981 343 aa14.02□□□□□ -0.17
SAMM50-205ENST00000493621 JAKMIP3Q5VZ66 844 aa14.02□□□□□ -0.17
SAMM50-205ENST00000493621 FAM43BQ6ZT52 329 aaPredicted RBP14.02□□□□□ -0.17
SAMM50-205ENST00000493621 NIPA1Q7RTP0 329 aa14.02□□□□□ -0.17
SAMM50-205ENST00000493621 TRMT1LQ7Z2T5 733 aaKnown RBP14.02□□□□□ -0.17
SAMM50-205ENST00000493621 FAM228AQ86W67 206 aa14.02□□□□□ -0.17
SAMM50-205ENST00000493621 TEX2Q8IWB9 1127 aa14.02□□□□□ -0.17
SAMM50-205ENST00000493621 SUGP1Q8IWZ8 645 aaKnown RBP14.02□□□□□ -0.17
SAMM50-205ENST00000493621 CKAP2LQ8IYA6 745 aa14.02□□□□□ -0.17
SAMM50-205ENST00000493621 NEK1Q96PY6 1258 aa14.02□□□□□ -0.17
SAMM50-205ENST00000493621 CDCA3Q99618 268 aaPredicted RBP14.02□□□□□ -0.17
SAMM50-205ENST00000493621 CWH43Q9H720 699 aa14.02□□□□□ -0.17
SAMM50-205ENST00000493621 ATP6V0A4Q9HBG4 840 aa14.02□□□□□ -0.17
SAMM50-205ENST00000493621 BARHL2Q9NY43 387 aa14.02□□□□□ -0.17
SAMM50-205ENST00000493621 BRPF3Q9ULD4 1205 aa14.02□□□□□ -0.17
SAMM50-205ENST00000493621 GOLGA8AA7E2F4 631 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms