RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 MSH4O15457 936 aa9.39□□□□□ -0.91
APP-216ENST00000491395 MGEA5O60502 916 aa9.39□□□□□ -0.91
APP-216ENST00000491395 RPS6KA5O75582 802 aa9.39□□□□□ -0.91
APP-216ENST00000491395 CSPG5O95196 566 aa9.39□□□□□ -0.91
APP-216ENST00000491395 C22orf31O95567 290 aa9.39□□□□□ -0.91
APP-216ENST00000491395 PSAPP07602 524 aa9.39□□□□□ -0.91
APP-216ENST00000491395 NLRP5P59047 1200 aa9.39□□□□□ -0.91
APP-216ENST00000491395 SETQ01105 290 aaPredicted RBP9.39□□□□□ -0.91
APP-216ENST00000491395 NFX1Q12986 1120 aaKnown RBP9.39□□□□□ -0.91
APP-216ENST00000491395 KIZQ2M2Z5 673 aa9.39□□□□□ -0.91
APP-216ENST00000491395 PAN2Q504Q3 1202 aaKnown RBP9.39□□□□□ -0.91
APP-216ENST00000491395 PTCRAQ6ISU1 281 aaPredicted RBP9.39□□□□□ -0.91
APP-216ENST00000491395 EP400NLQ6ZTU2 488 aa9.39□□□□□ -0.91
APP-216ENST00000491395 NPAS4Q8IUM7 802 aa9.39□□□□□ -0.91
APP-216ENST00000491395 METTL13Q8N6R0 699 aa9.39□□□□□ -0.91
APP-216ENST00000491395 CCDC148Q8NFR7 591 aa9.39□□□□□ -0.91
APP-216ENST00000491395 NEK9Q8TD19 979 aa9.39□□□□□ -0.91
APP-216ENST00000491395 KHSRPQ92945 711 aaKnown RBP eCLIP9.39□□□□□ -0.91
APP-216ENST00000491395 GJA10Q969M2 543 aa9.39□□□□□ -0.91
APP-216ENST00000491395 PPP1R16BQ96T49 567 aa9.39□□□□□ -0.91
APP-216ENST00000491395 C11orf84Q9BUA3 381 aaPredicted RBP9.39□□□□□ -0.91
APP-216ENST00000491395 UPF3BQ9BZI7 483 aaKnown RBP9.39□□□□□ -0.91
APP-216ENST00000491395 NSUN3Q9H649 340 aaKnown RBP9.39□□□□□ -0.91
APP-216ENST00000491395 ERVK-5Q9HDB9 667 aa9.39□□□□□ -0.91
APP-216ENST00000491395 ALG13Q9NP73 1137 aaKnown RBP9.39□□□□□ -0.91
APP-216ENST00000491395 ST3GAL5Q9UNP4 418 aa9.39□□□□□ -0.91
APP-216ENST00000491395 RWDD3Q9Y3V2 267 aa9.39□□□□□ -0.91
APP-216ENST00000491395 PCDHA10Q9Y5I2 948 aa9.39□□□□□ -0.91
APP-216ENST00000491395 CYP46A1Q9Y6A2 500 aa9.39□□□□□ -0.91
APP-216ENST00000491395 TCF20Q9UGU0 1960 aaKnown RBP9.39□□□□□ -0.91
APP-216ENST00000491395 COL1A2P08123 1366 aa9.38□□□□□ -0.91
APP-216ENST00000491395 MICAL3Q7RTP6 2002 aa9.38□□□□□ -0.91
APP-216ENST00000491395 GRXCR2A6NFK2 248 aa9.38□□□□□ -0.91
APP-216ENST00000491395 ZNF862O60290 1169 aa9.38□□□□□ -0.91
APP-216ENST00000491395 VTNP04004 478 aa9.38□□□□□ -0.91
APP-216ENST00000491395 STAG3L1P0CL83 205 aa9.38□□□□□ -0.91
APP-216ENST00000491395 IL9P15248 144 aa9.38□□□□□ -0.91
APP-216ENST00000491395 USP11P51784 963 aa9.38□□□□□ -0.91
APP-216ENST00000491395 SSRP1Q08945 709 aaKnown RBP9.38□□□□□ -0.91
APP-216ENST00000491395 STK3Q13188 491 aa9.38□□□□□ -0.91
APP-216ENST00000491395 CAMK1Q14012 370 aa9.38□□□□□ -0.91
APP-216ENST00000491395 COL19A1Q14993 1142 aa9.38□□□□□ -0.91
APP-216ENST00000491395 FAM178BQ8IXR5 827 aa9.38□□□□□ -0.91
APP-216ENST00000491395 SMAP1Q8IYB5 467 aaPredicted RBP9.38□□□□□ -0.91
APP-216ENST00000491395 CMTR2Q8IYT2 770 aaKnown RBP9.38□□□□□ -0.91
APP-216ENST00000491395 TBCKQ8TEA7 893 aa9.38□□□□□ -0.91
APP-216ENST00000491395 BBXQ8WY36 941 aaPredicted RBP9.38□□□□□ -0.91
APP-216ENST00000491395 PABPC5Q96DU9 382 aaKnown RBP9.38□□□□□ -0.91
APP-216ENST00000491395 AIFM3Q96NN9 605 aa9.38□□□□□ -0.91
APP-216ENST00000491395 OSMRQ99650 979 aa9.38□□□□□ -0.91
APP-216ENST00000491395 ADAM2Q99965 735 aa9.38□□□□□ -0.91
APP-216ENST00000491395 PLVAPQ9BX97 442 aa9.38□□□□□ -0.91
APP-216ENST00000491395 C1QTNF1Q9BXJ1 281 aa9.38□□□□□ -0.91
APP-216ENST00000491395 LMAN2LQ9H0V9 348 aa9.38□□□□□ -0.91
APP-216ENST00000491395 SH3GLB2Q9NR46 395 aa9.38□□□□□ -0.91
APP-216ENST00000491395 DISC1Q9NRI5 854 aa9.38□□□□□ -0.91
APP-216ENST00000491395 CLDND1Q9NY35 253 aa9.38□□□□□ -0.91
APP-216ENST00000491395 TCEAL9Q9UHQ7 104 aa9.38□□□□□ -0.91
APP-216ENST00000491395 PLAGL2Q9UPG8 496 aa9.38□□□□□ -0.91
APP-216ENST00000491395 SAMM50Q9Y512 469 aa9.38□□□□□ -0.91
APP-216ENST00000491395 REV3LO60673 3130 aa9.38□□□□□ -0.91
APP-216ENST00000491395 DENND3A2RUS2 1198 aa9.37□□□□□ -0.91
APP-216ENST00000491395 WDR64B1ANS9 1081 aa9.37□□□□□ -0.91
APP-216ENST00000491395 CPLX1O14810 134 aa9.37□□□□□ -0.91
APP-216ENST00000491395 GPR182O15218 404 aa9.37□□□□□ -0.91
APP-216ENST00000491395 CHMP2AO43633 222 aa9.37□□□□□ -0.91
APP-216ENST00000491395 DTNBO60941 627 aa9.37□□□□□ -0.91
APP-216ENST00000491395 GPR32O75388 356 aa9.37□□□□□ -0.91
APP-216ENST00000491395 ITGB1P05556 798 aa9.37□□□□□ -0.91
APP-216ENST00000491395 DNAJB1P25685 340 aa9.37□□□□□ -0.91
APP-216ENST00000491395 GTF2F1P35269 517 aaKnown RBP eCLIP9.37□□□□□ -0.91
APP-216ENST00000491395 LTBRP36941 435 aa9.37□□□□□ -0.91
APP-216ENST00000491395 SARSP49591 514 aaKnown RBP9.37□□□□□ -0.91
APP-216ENST00000491395 CLCN3P51790 818 aa9.37□□□□□ -0.91
APP-216ENST00000491395 CRYBB1P53674 252 aaPredicted RBP9.37□□□□□ -0.91
APP-216ENST00000491395 HYAL1Q12794 435 aa9.37□□□□□ -0.91
APP-216ENST00000491395 UGCGQ16739 394 aa9.37□□□□□ -0.91
APP-216ENST00000491395 FAM102BQ5T8I3 360 aa9.37□□□□□ -0.91
APP-216ENST00000491395 FAM228AQ86W67 206 aa9.37□□□□□ -0.91
APP-216ENST00000491395 TRIM22Q8IYM9 498 aa9.37□□□□□ -0.91
APP-216ENST00000491395 GJD3Q8N144 294 aa9.37□□□□□ -0.91
APP-216ENST00000491395 KLHL23Q8NBE8 558 aa9.37□□□□□ -0.91
APP-216ENST00000491395 SPPL3Q8TCT6 385 aa9.37□□□□□ -0.91
APP-216ENST00000491395 SLC5A5Q92911 643 aa9.37□□□□□ -0.91
APP-216ENST00000491395 ZNF274Q96GC6 653 aaPredicted RBP9.37□□□□□ -0.91
APP-216ENST00000491395 ZNF668Q96K58 619 aaPredicted RBP9.37□□□□□ -0.91
APP-216ENST00000491395 RIT2Q99578 217 aa9.37□□□□□ -0.91
APP-216ENST00000491395 TM6SF1Q9BZW5 370 aa9.37□□□□□ -0.91
APP-216ENST00000491395 UNC45AQ9H3U1 944 aa9.37□□□□□ -0.91
APP-216ENST00000491395 IGFLR1Q9H665 355 aa9.37□□□□□ -0.91
APP-216ENST00000491395 RGS18Q9NS28 235 aa9.37□□□□□ -0.91
APP-216ENST00000491395 NRBP2Q9NSY0 501 aa9.37□□□□□ -0.91
APP-216ENST00000491395 PDRG1Q9NUG6 133 aa9.37□□□□□ -0.91
APP-216ENST00000491395 LRFN2Q9ULH4 789 aa9.37□□□□□ -0.91
APP-216ENST00000491395 PCDHA4Q9UN74 947 aa9.37□□□□□ -0.91
APP-216ENST00000491395 PCDHB7Q9Y5E2 793 aa9.37□□□□□ -0.91
APP-216ENST00000491395 MUC3AQ02505 3323 aa9.36□□□□□ -0.91
APP-216ENST00000491395 COL4A4P53420 1690 aaPredicted RBP9.36□□□□□ -0.91
APP-216ENST00000491395 COL4A6Q14031 1691 aa9.36□□□□□ -0.91
APP-216ENST00000491395 XIRP2A4UGR9 3374 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms