RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 CNGA1P29973 690 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 GTF2F1P35269 517 aaKnown RBP eCLIP3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 PLCD1P51178 756 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 ARHGAP8P85298 464 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 ITIH3Q06033 890 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 ARHGAP1Q07960 439 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 NEDD9Q14511 834 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 GNASQ5JWF2 1037 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 SLC9C2Q5TAH2 1124 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 ANKRD35Q8N283 1001 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 FBXL6Q8N531 539 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 RDM1Q8NG50 284 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 EPS8L3Q8TE67 593 aaKnown RBP3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 CASP10Q92851 521 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 TOP1MTQ969P6 601 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 GPRASP2Q96D09 838 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 NEUROD6Q96NK8 337 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 AVENQ9NQS1 362 aaPredicted RBP3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 PRDM5Q9NQX1 630 aaPredicted RBP3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 IRAK3Q9Y616 596 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 BAZ2AQ9UIF9 1905 aaKnown RBP3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 ADGRA3Q8IWK6 1321 aa3.17□□□□□ -1.9
DEPDC1-203ENST00000488146 PNMA6EA0A0J9YXQ4 647 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 LINC01553A4QN01 128 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 SOBPA7XYQ1 873 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 J3QL48 77 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 M0R2N6 131 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 SIAH2O43255 324 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 MBTPS2O43462 519 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 PQBP1O60828 265 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 SURF6O75683 361 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 MICAL2O94851 1124 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 CSF2RAP15509 400 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 NOS2P35228 1153 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 PLA2G4AP47712 749 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 PSMA6P60900 246 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 DYNLL1P63167 89 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 ZNF543Q08ER8 600 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 KCNC3Q14003 757 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 RAB3GAP1Q15042 981 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 NONOQ15233 471 aaKnown RBP eCLIP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 STXBP2Q15833 593 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 PTPN21Q16825 1174 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 FAM83BQ5T0W9 1011 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 TREML1Q86YW5 311 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 LCORLQ8N3X6 602 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 CCDC51Q96ER9 411 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 TRERF1Q96PN7 1200 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 PHF7Q9BWX1 381 aaPredicted RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 DCTPP1Q9H773 170 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 NGRNQ9NPE2 291 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 ZNF215Q9UL58 517 aaPredicted RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 SCAF8Q9UPN6 1271 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 PA2G4Q9UQ80 394 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 JAG2Q9Y219 1238 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 SERTM1A2A2V5 107 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 TMEM221A6NGB7 291 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 M0R296 226 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 SCAMP3O14828 347 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 MBD4O95243 580 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 PDGFAP04085 211 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 C6orf222P0C671 652 aaPredicted RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 LINC00271P0C7V0 271 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 HSPD1P10809 573 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 LAG3P18627 525 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 CCND2P30279 289 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 BMPR1AP36894 532 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 MRE11P49959 708 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 GNAQP50148 359 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 LIMK1P53667 647 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 RACK1P63244 317 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 FAM189BP81408 668 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 CENPCQ03188 943 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 NNTQ13423 1086 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 OS9Q13438 667 aaPredicted RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 BMS1Q14692 1282 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 DUSP6Q16828 381 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 GNPTABQ3T906 1256 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 KIAA1755Q5JYT7 1200 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 ZNF662Q6ZS27 426 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 STOX1Q6ZVD7 989 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 PHLPP2Q6ZVD8 1323 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 PLPPR4Q7Z2D5 763 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 AACSQ86V21 672 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 CCDC144CPQ8IYA2 1237 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 KLHDC4Q8TBB5 520 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 DDX1Q92499 740 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 NELL1Q92832 810 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 EVI5LQ96CN4 794 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 IFT43Q96FT9 208 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 FAM129BQ96TA1 746 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 GPR20Q99678 358 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 DSCC1Q9BVC3 393 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 TOR4AQ9NXH8 423 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 FBXO4Q9UKT5 387 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 ZHX1Q9UKY1 873 aaPredicted RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 SLC4A4Q9Y6R1 1079 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 PATJQ8NI35 1801 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 EIF1AYO14602 144 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms