RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 TLE2Q04725 743 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 GRIN1Q05586 938 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 TBC1D8BQ0IIM8 1120 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 XKR9Q5GH70 373 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 SPECC1Q5M775 1068 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 PLA2G4FQ68DD2 849 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 GDF6Q6KF10 455 aaPredicted RBP12.72□□□□□ -0.37
NUP50-216ENST00000486184 POTEGQ6S5H5 508 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 ANKRD33Q7Z3H0 272 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 IFNLR1Q8IU57 520 aaPredicted RBP12.72□□□□□ -0.37
NUP50-216ENST00000486184 FAM126BQ8IXS8 530 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 EXOC8Q8IYI6 725 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 C7orf61Q8IZ16 206 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 ZNF579Q8NAF0 562 aaKnown RBP12.72□□□□□ -0.37
NUP50-216ENST00000486184 RETREG2Q8NC44 543 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 SYMPKQ92797 1274 aaKnown RBP12.72□□□□□ -0.37
NUP50-216ENST00000486184 CHAMP1Q96JM3 812 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 CEP170P1Q96L14 293 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 NIFKQ9BYG3 293 aaKnown RBP12.72□□□□□ -0.37
NUP50-216ENST00000486184 PRDM5Q9NQX1 630 aaPredicted RBP12.72□□□□□ -0.37
NUP50-216ENST00000486184 TRMT13Q9NUP7 481 aaKnown RBP12.72□□□□□ -0.37
NUP50-216ENST00000486184 DDX19AQ9NUU7 478 aaKnown RBP12.72□□□□□ -0.37
NUP50-216ENST00000486184 FAM13BQ9NYF5 915 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 PCDHA7Q9UN72 937 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 FARP1Q9Y4F1 1045 aaPredicted RBP12.72□□□□□ -0.37
NUP50-216ENST00000486184 ARHGEF35A5YM69 484 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 MAGEB2O15479 319 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 SPATA31C1P0DKV0 1188 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 CYP2C9P11712 490 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 XRCC6P12956 609 aaKnown RBP eCLIP12.71□□□□□ -0.37
NUP50-216ENST00000486184 TPRNQ4KMQ1 711 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 ANO5Q75V66 913 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 RSPH3Q86UC2 560 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 KCTD17Q8N5Z5 321 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 PIGOQ8TEQ8 1089 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 TRAPPC12Q8WVT3 735 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 SLC7A3Q8WY07 619 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 PLIN2Q99541 437 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 JPH2Q9BR39 696 aaPredicted RBP12.71□□□□□ -0.37
NUP50-216ENST00000486184 CCSER1Q9C0I3 900 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 TRPV6Q9H1D0 765 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 GDPD2Q9HCC8 539 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 CYP26B1Q9NR63 512 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 ANKEF1Q9NU02 776 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 TMEM39AQ9NV64 488 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 WRAP73Q9P2S5 460 aaPredicted RBP12.71□□□□□ -0.37
NUP50-216ENST00000486184 DNM3Q9UQ16 869 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 PPME1Q9Y570 386 aa12.71□□□□□ -0.37
NUP50-216ENST00000486184 TMEM150BA6NC51 233 aa12.7□□□□□ -0.38
NUP50-216ENST00000486184 TREHO43280 583 aa12.7□□□□□ -0.38
NUP50-216ENST00000486184 RPLP2P05387 115 aaKnown RBP12.7□□□□□ -0.38
NUP50-216ENST00000486184 KLRC1P26715 233 aa12.7□□□□□ -0.38
NUP50-216ENST00000486184 TMOD1P28289 359 aa12.7□□□□□ -0.38
NUP50-216ENST00000486184 RFC5P40937 340 aa12.7□□□□□ -0.38
NUP50-216ENST00000486184 DNM2P50570 870 aa12.7□□□□□ -0.38
NUP50-216ENST00000486184 POLGP54098 1239 aaPredicted RBP12.7□□□□□ -0.38
NUP50-216ENST00000486184 ZNF200P98182 395 aaPredicted RBP12.7□□□□□ -0.38
NUP50-216ENST00000486184 PTK7Q13308 1070 aa12.7□□□□□ -0.38
NUP50-216ENST00000486184 BFSP2Q13515 415 aa12.7□□□□□ -0.38
NUP50-216ENST00000486184 KARSQ15046 597 aaKnown RBP12.7□□□□□ -0.38
NUP50-216ENST00000486184 TAF2Q6P1X5 1199 aa12.7□□□□□ -0.38
NUP50-216ENST00000486184 MTHFD1LQ6UB35 978 aa12.7□□□□□ -0.38
NUP50-216ENST00000486184 CCDC73Q6ZRK6 1079 aa12.7□□□□□ -0.38
NUP50-216ENST00000486184 METTL13Q8N6R0 699 aa12.7□□□□□ -0.38
NUP50-216ENST00000486184 EPSTI1Q96J88 318 aa12.7□□□□□ -0.38
NUP50-216ENST00000486184 SH2D3AQ9BRG2 576 aa12.7□□□□□ -0.38
NUP50-216ENST00000486184 MMTAG2Q9BU76 263 aaKnown RBP12.7□□□□□ -0.38
NUP50-216ENST00000486184 DBR1Q9UK59 544 aaKnown RBP12.7□□□□□ -0.38
NUP50-216ENST00000486184 NR2E3Q9Y5X4 410 aa12.7□□□□□ -0.38
NUP50-216ENST00000486184 E9PMD0 336 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 M0QZ92 97 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 EYA4O95677 639 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 CD4P01730 458 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 SSBP05455 408 aaKnown RBP eCLIP12.69□□□□□ -0.38
NUP50-216ENST00000486184 HOXC8P31273 242 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 STAT6P42226 847 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 NPEPPSP55786 919 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 FAAP100Q0VG06 881 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 HYIQ5T013 277 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 RRAGBQ5VZM2 374 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 ADALQ6DHV7 355 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 SERINC5Q86VE9 423 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 CAGE1Q8TC20 777 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 GBP4Q96PP9 640 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 MAP7D2Q96T17 732 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 PYM1Q9BRP8 204 aaKnown RBP12.69□□□□□ -0.38
NUP50-216ENST00000486184 FAM49AQ9H0Q0 323 aaPredicted RBP12.69□□□□□ -0.38
NUP50-216ENST00000486184 BHMT2Q9H2M3 363 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 SUGCTQ9HAC7 445 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 ATP6V0A4Q9HBG4 840 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 PCDHA2Q9Y5H9 948 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 LTBP2Q14767 1821 aa12.69□□□□□ -0.38
NUP50-216ENST00000486184 A0A087WWV3 80 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 MBLAC1A4D2B0 266 aaPredicted RBP12.68□□□□□ -0.38
NUP50-216ENST00000486184 ZBTB42B2RXF5 422 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 ZBTB39O15060 712 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 GAS2O43903 313 aaKnown RBP12.68□□□□□ -0.38
NUP50-216ENST00000486184 USO1O60763 962 aaKnown RBP12.68□□□□□ -0.38
NUP50-216ENST00000486184 DGAT1O75907 488 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 STBD1O95210 358 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms