RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 DDX47Q9H0S4 455 aaKnown RBP15.58■□□□□ 0.08
NR1H3-220ENST00000481020 NEUROG2Q9H2A3 272 aa15.58■□□□□ 0.08
NR1H3-220ENST00000481020 HAUS2Q9NVX0 235 aa15.58■□□□□ 0.08
NR1H3-220ENST00000481020 SAMD15Q9P1V8 674 aa15.58■□□□□ 0.08
NR1H3-220ENST00000481020 BCCIPQ9P287 314 aaKnown RBP eCLIP15.58■□□□□ 0.08
NR1H3-220ENST00000481020 CNOT8Q9UFF9 292 aaKnown RBP15.58■□□□□ 0.08
NR1H3-220ENST00000481020 DDX25Q9UHL0 483 aaKnown RBP15.58■□□□□ 0.08
NR1H3-220ENST00000481020 PCDHA12Q9UN75 941 aa15.58■□□□□ 0.08
NR1H3-220ENST00000481020 WNK3Q9BYP7 1800 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 POTEMA6NI47 508 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 GGPS1O95749 300 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 SNHG28P0DPA3 235 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 CALRP27797 417 aaKnown RBP15.57■□□□□ 0.08
NR1H3-220ENST00000481020 CLK2P49760 499 aaKnown RBP15.57■□□□□ 0.08
NR1H3-220ENST00000481020 ZNF131P52739 623 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 HADHBP55084 474 aaKnown RBP15.57■□□□□ 0.08
NR1H3-220ENST00000481020 TCEAL1Q15170 157 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 NFIL3Q16649 462 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 BMT2Q1RMZ1 405 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 TLDC1Q6P9B6 456 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 C15orf52Q6ZUT6 534 aaKnown RBP15.57■□□□□ 0.08
NR1H3-220ENST00000481020 KCNK18Q7Z418 384 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 RFFLQ8WZ73 363 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 ERP44Q9BS26 406 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 AMACRQ9UHK6 382 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 BAZ2BQ9UIF8 2168 aaKnown RBP15.57■□□□□ 0.08
NR1H3-220ENST00000481020 NRAPQ86VF7 1730 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 F8W031 263 aaPredicted RBP15.57■□□□□ 0.08
NR1H3-220ENST00000481020 PODXLO00592 558 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 CTNND1O60716 968 aaKnown RBP15.57■□□□□ 0.08
NR1H3-220ENST00000481020 TDP2O95551 362 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 ATP6V1G2O95670 118 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 PLA2G4BP0C869 781 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 GOLGA8HP0CJ92 632 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 NR2F2P24468 414 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 PON1P27169 355 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 TMOD1P28289 359 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 CDK8P49336 464 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 DNA2P51530 1060 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 ELF3P78545 371 aaPredicted RBP15.57■□□□□ 0.08
NR1H3-220ENST00000481020 HERC4Q5GLZ8 1057 aaPredicted RBP15.57■□□□□ 0.08
NR1H3-220ENST00000481020 DENND2CQ68D51 928 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 TAOK1Q7L7X3 1001 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 FAM228AQ86W67 206 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 OR2W6PQ8NHA6 318 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 SH3RF3Q8TEJ3 882 aaPredicted RBP15.57■□□□□ 0.08
NR1H3-220ENST00000481020 CELF1Q92879 486 aaKnown RBP15.57■□□□□ 0.08
NR1H3-220ENST00000481020 VTI1AQ96AJ9 217 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 AP1M1Q9BXS5 423 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 EBF2Q9HAK2 575 aa15.57■□□□□ 0.08
NR1H3-220ENST00000481020 PNMA6FA0A0J9YX94 578 aa15.56■□□□□ 0.08
NR1H3-220ENST00000481020 MIF4GDA9UHW6 222 aaKnown RBP15.56■□□□□ 0.08
NR1H3-220ENST00000481020 TTI1O43156 1089 aa15.56■□□□□ 0.08
NR1H3-220ENST00000481020 STAT1P42224 750 aa15.56■□□□□ 0.08
NR1H3-220ENST00000481020 RNASE9P60153 205 aaKnown RBP15.56■□□□□ 0.08
NR1H3-220ENST00000481020 DR1Q01658 176 aa15.56■□□□□ 0.08
NR1H3-220ENST00000481020 ARID5AQ03989 594 aa15.56■□□□□ 0.08
NR1H3-220ENST00000481020 EPHA7Q15375 998 aa15.56■□□□□ 0.08
NR1H3-220ENST00000481020 KNOP1Q1ED39 458 aaKnown RBP15.56■□□□□ 0.08
NR1H3-220ENST00000481020 DAAM2Q86T65 1068 aa15.56■□□□□ 0.08
NR1H3-220ENST00000481020 CEP57Q86XR8 500 aa15.56■□□□□ 0.08
NR1H3-220ENST00000481020 SLF2Q8IX21 1173 aa15.56■□□□□ 0.08
NR1H3-220ENST00000481020 SLFN12Q8IYM2 578 aa15.56■□□□□ 0.08
NR1H3-220ENST00000481020 TBC1D22AQ8WUA7 517 aa15.56■□□□□ 0.08
NR1H3-220ENST00000481020 ZNF622Q969S3 477 aaKnown RBP eCLIP15.56■□□□□ 0.08
NR1H3-220ENST00000481020 NLRP3Q96P20 1036 aa15.56■□□□□ 0.08
NR1H3-220ENST00000481020 ROPN1BQ9BZX4 212 aaPredicted RBP15.56■□□□□ 0.08
NR1H3-220ENST00000481020 ROPN1Q9HAT0 212 aaPredicted RBP15.56■□□□□ 0.08
NR1H3-220ENST00000481020 ZDHHC18Q9NUE0 388 aa15.56■□□□□ 0.08
NR1H3-220ENST00000481020 NHSQ6T4R5 1651 aa15.56■□□□□ 0.08
NR1H3-220ENST00000481020 DDX60LQ5H9U9 1706 aaKnown RBP15.55■□□□□ 0.08
NR1H3-220ENST00000481020 EDIL3O43854 480 aa15.55■□□□□ 0.08
NR1H3-220ENST00000481020 MMEP08473 750 aa15.55■□□□□ 0.08
NR1H3-220ENST00000481020 CYP11B2P19099 503 aa15.55■□□□□ 0.08
NR1H3-220ENST00000481020 RFX1P22670 979 aa15.55■□□□□ 0.08
NR1H3-220ENST00000481020 PMS2P54278 862 aa15.55■□□□□ 0.08
NR1H3-220ENST00000481020 ZNF268Q14587 947 aaPredicted RBP15.55■□□□□ 0.08
NR1H3-220ENST00000481020 USP17L2Q6R6M4 530 aa15.55■□□□□ 0.08
NR1H3-220ENST00000481020 EPM2AIP1Q7L775 607 aaPredicted RBP15.55■□□□□ 0.08
NR1H3-220ENST00000481020 GPBP1Q86WP2 473 aa15.55■□□□□ 0.08
NR1H3-220ENST00000481020 DDX42Q86XP3 938 aaKnown RBP eCLIP15.55■□□□□ 0.08
NR1H3-220ENST00000481020 CCDC63Q8NA47 563 aa15.55■□□□□ 0.08
NR1H3-220ENST00000481020 GLIS3Q8NEA6 775 aa15.55■□□□□ 0.08
NR1H3-220ENST00000481020 SLC30A5Q8TAD4 765 aa15.55■□□□□ 0.08
NR1H3-220ENST00000481020 MORC4Q8TE76 937 aa15.55■□□□□ 0.08
NR1H3-220ENST00000481020 ATP8B4Q8TF62 1192 aa15.55■□□□□ 0.08
NR1H3-220ENST00000481020 ATXN2LQ8WWM7 1075 aaKnown RBP15.55■□□□□ 0.08
NR1H3-220ENST00000481020 HAS1Q92839 578 aa15.55■□□□□ 0.08
NR1H3-220ENST00000481020 NUDT12Q9BQG2 462 aa15.55■□□□□ 0.08
NR1H3-220ENST00000481020 NOD2Q9HC29 1040 aa15.55■□□□□ 0.08
NR1H3-220ENST00000481020 TMEM260Q9NX78 707 aa15.55■□□□□ 0.08
NR1H3-220ENST00000481020 MTRF1LQ9UGC7 380 aaKnown RBP15.55■□□□□ 0.08
NR1H3-220ENST00000481020 THRAP3Q9Y2W1 955 aaKnown RBP15.55■□□□□ 0.08
NR1H3-220ENST00000481020 SPATA31A1Q5TZJ5 1347 aa15.55■□□□□ 0.08
NR1H3-220ENST00000481020 CYP3A7-CYP3A51PA0A087WV96 503 aa15.54■□□□□ 0.08
NR1H3-220ENST00000481020 TBX3O15119 743 aa15.54■□□□□ 0.08
NR1H3-220ENST00000481020 MARCH6O60337 910 aa15.54■□□□□ 0.08
NR1H3-220ENST00000481020 ZPR1O75312 459 aa15.54■□□□□ 0.08
NR1H3-220ENST00000481020 PDHBP11177 359 aa15.54■□□□□ 0.08
NR1H3-220ENST00000481020 ALADP13716 330 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms