RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 DNAJB3Q8WWF6 145 aa7.82□□□□□ -1.16
SF3A3-205ENST00000470585 MRPS27Q92552 414 aaKnown RBP7.82□□□□□ -1.16
SF3A3-205ENST00000470585 GPKOWQ92917 476 aaPredicted RBP eCLIP7.82□□□□□ -1.16
SF3A3-205ENST00000470585 ZKSCAN3Q9BRR0 538 aa7.82□□□□□ -1.16
SF3A3-205ENST00000470585 CELF4Q9BZC1 486 aaKnown RBP7.82□□□□□ -1.16
SF3A3-205ENST00000470585 OCEL1Q9H607 264 aa7.82□□□□□ -1.16
SF3A3-205ENST00000470585 AZI2Q9H6S1 392 aa7.82□□□□□ -1.16
SF3A3-205ENST00000470585 VAT1LQ9HCJ6 419 aa7.82□□□□□ -1.16
SF3A3-205ENST00000470585 RGS18Q9NS28 235 aa7.82□□□□□ -1.16
SF3A3-205ENST00000470585 TMEM161AQ9NX61 479 aa7.82□□□□□ -1.16
SF3A3-205ENST00000470585 COL1A2P08123 1366 aa7.82□□□□□ -1.16
SF3A3-205ENST00000470585 KMT2BQ9UMN6 2715 aaPredicted RBP7.81□□□□□ -1.16
SF3A3-205ENST00000470585 NFASCO94856 1347 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 SPTBN2O15020 2390 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 DMXL1Q9Y485 3027 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 B4E1Z4 1266 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 C9IYK1 514 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 GPR182O15218 404 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 AOC1P19801 751 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 SDHBP21912 280 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 TECP42680 631 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 FAM189BP81408 668 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 KRT76Q01546 638 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 SART3Q15020 963 aaKnown RBP7.81□□□□□ -1.16
SF3A3-205ENST00000470585 UTP14CQ5TAP6 766 aaKnown RBP7.81□□□□□ -1.16
SF3A3-205ENST00000470585 KIAA1841Q6NSI8 718 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 RBM23Q86U06 439 aaKnown RBP7.81□□□□□ -1.16
SF3A3-205ENST00000470585 CCDC105Q8IYK2 499 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 THNSL1Q8IYQ7 743 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 ADSSL1Q8N142 457 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 STAG2Q8N3U4 1231 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 TMEM105Q8N8V8 129 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 TDRD5Q8NAT2 981 aaKnown RBP7.81□□□□□ -1.16
SF3A3-205ENST00000470585 OTUD7AQ8TE49 926 aaPredicted RBP7.81□□□□□ -1.16
SF3A3-205ENST00000470585 GLG1Q92896 1179 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 FAM212AQ96EL1 285 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 LZTS2Q9BRK4 669 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 MTA3Q9BTC8 594 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 SPZ1Q9BXG8 430 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 TMEM121BQ9BXQ6 578 aaPredicted RBP7.81□□□□□ -1.16
SF3A3-205ENST00000470585 RHOBTB2Q9BYZ6 727 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 TMEM117Q9H0C3 514 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 TMEM260Q9NX78 707 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.81□□□□□ -1.16
SF3A3-205ENST00000470585 IRAK3Q9Y616 596 aa7.81□□□□□ -1.16
SF3A3-205ENST00000470585 GSTTP1A0A1W2PQM5 241 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 ERICH2A1L162 156 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 DENND3A2RUS2 1198 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 SNPHO15079 494 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 BRD1O95696 1058 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 INSRRP14616 1297 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 SDSP20132 328 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 GNAQP50148 359 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 ERVFC1P60507 584 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 TRDNQ13061 729 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 HDAC1Q13547 482 aaPredicted RBP7.8□□□□□ -1.16
SF3A3-205ENST00000470585 MTMR1Q13613 665 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 PUM1Q14671 1186 aaKnown RBP eCLIP7.8□□□□□ -1.161e-6■■□□□ 11.7
SF3A3-205ENST00000470585 SMC1AQ14683 1233 aaKnown RBP7.8□□□□□ -1.16
SF3A3-205ENST00000470585 SPOUT1Q5T280 376 aaKnown RBP7.8□□□□□ -1.16
SF3A3-205ENST00000470585 ZC3H14Q6PJT7 736 aaKnown RBP7.8□□□□□ -1.16
SF3A3-205ENST00000470585 CYP26C1Q6V0L0 522 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 LRRC43Q8N309 656 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 MRPL43Q8N983 215 aaKnown RBP7.8□□□□□ -1.16
SF3A3-205ENST00000470585 SMARCC2Q8TAQ2 1214 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 MFSD1Q9H3U5 465 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 OSBPL3Q9H4L5 887 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 ATP6V0A4Q9HBG4 840 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 ERVK-5Q9HDB9 667 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 JPH1Q9HDC5 661 aaPredicted RBP7.8□□□□□ -1.16
SF3A3-205ENST00000470585 UBIAD1Q9Y5Z9 338 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 DOCK5Q9H7D0 1870 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 CHD8Q9HCK8 2581 aa7.8□□□□□ -1.16
SF3A3-205ENST00000470585 GPR179Q6PRD1 2367 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 C2CD4DB7Z1M9 353 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 MEIS2O14770 477 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 PER2O15055 1255 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 HBP1O60381 514 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 SORBS3O60504 671 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 RPS6KA5O75582 802 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 ATG7O95352 703 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 C1RP00736 705 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 LMNAP02545 664 aaKnown RBP7.79□□□□□ -1.16
SF3A3-205ENST00000470585 KIF5BP33176 963 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 POLGP54098 1239 aaPredicted RBP7.79□□□□□ -1.16
SF3A3-205ENST00000470585 TROAPQ12815 778 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 NONOQ15233 471 aaKnown RBP eCLIP7.79□□□□□ -1.16
SF3A3-205ENST00000470585 PAN2Q504Q3 1202 aaKnown RBP7.79□□□□□ -1.16
SF3A3-205ENST00000470585 ATAT1Q5SQI0 421 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 C20orf194Q5TEA3 1177 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 KCNT2Q6UVM3 1135 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 OTOP3Q7RTS5 596 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 FRMD5Q7Z6J6 570 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 PPFIBP1Q86W92 1011 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 HOMER1Q86YM7 354 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 GPR161Q8N6U8 529 aaKnown RBP7.79□□□□□ -1.16
SF3A3-205ENST00000470585 NXPE3Q969Y0 559 aa7.79□□□□□ -1.16
SF3A3-205ENST00000470585 ACSF2Q96CM8 615 aaPredicted RBP7.79□□□□□ -1.16
SF3A3-205ENST00000470585 RRP36Q96EU6 259 aaKnown RBP7.79□□□□□ -1.16
SF3A3-205ENST00000470585 ZNF558Q96NG5 402 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms