RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 DAAM1Q9Y4D1 1078 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 KIF3CO14782 793 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 TDP2O95551 362 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 SMARCA1P28370 1054 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 HIBADHP31937 336 aaKnown RBP14.91□□□□□ -0.02
PTPRE-204ENST00000455661 EDRF1Q3B7T1 1238 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 HERC4Q5GLZ8 1057 aaPredicted RBP14.91□□□□□ -0.02
PTPRE-204ENST00000455661 SPTY2D1Q68D10 685 aaPredicted RBP14.91□□□□□ -0.02
PTPRE-204ENST00000455661 KIRREL3Q8IZU9 778 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 THOC1Q96FV9 657 aaKnown RBP14.91□□□□□ -0.02
PTPRE-204ENST00000455661 NT5C3AQ9H0P0 336 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 LRRC4CQ9HCJ2 640 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 NOP53Q9NZM5 478 aaKnown RBP14.91□□□□□ -0.02
PTPRE-204ENST00000455661 ATAD5Q96QE3 1844 aa14.9□□□□□ -0.02
PTPRE-204ENST00000455661 FAM187AA6NFU0 413 aa14.9□□□□□ -0.02
PTPRE-204ENST00000455661 SPDYE3A6NKU9 549 aa14.9□□□□□ -0.02
PTPRE-204ENST00000455661 AGTP01019 485 aa14.9□□□□□ -0.02
PTPRE-204ENST00000455661 AFPP02771 609 aaKnown RBP14.9□□□□□ -0.02
PTPRE-204ENST00000455661 SHBGP04278 402 aa14.9□□□□□ -0.02
PTPRE-204ENST00000455661 SLC9A1P19634 815 aa14.9□□□□□ -0.02
PTPRE-204ENST00000455661 PTENP60484 403 aa14.9□□□□□ -0.02
PTPRE-204ENST00000455661 POU5F1Q01860 360 aaKnown RBP14.9□□□□□ -0.02
PTPRE-204ENST00000455661 ADCY2Q08462 1091 aa14.9□□□□□ -0.02
PTPRE-204ENST00000455661 ZNF268Q14587 947 aaPredicted RBP14.9□□□□□ -0.02
PTPRE-204ENST00000455661 CLUL1Q15846 466 aa14.9□□□□□ -0.02
PTPRE-204ENST00000455661 EXOC3L4Q17RC7 722 aa14.9□□□□□ -0.02
PTPRE-204ENST00000455661 PIGSQ96S52 555 aa14.9□□□□□ -0.02
PTPRE-204ENST00000455661 PRMT1Q99873 361 aaKnown RBP14.9□□□□□ -0.02
PTPRE-204ENST00000455661 ERP44Q9BS26 406 aa14.9□□□□□ -0.02
PTPRE-204ENST00000455661 CCDC87Q9NVE4 849 aa14.9□□□□□ -0.02
PTPRE-204ENST00000455661 RASAL2Q9UJF2 1139 aa14.9□□□□□ -0.02
PTPRE-204ENST00000455661 SCN7AQ01118 1682 aa14.9□□□□□ -0.02
PTPRE-204ENST00000455661 AFF2P51816 1311 aa14.9□□□□□ -0.02
PTPRE-204ENST00000455661 hCG_1984214I3L0E3 225 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 CAMTA2O94983 1202 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 ADCY7P51828 1080 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 DUPD1Q68J44 220 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 COL23A1Q86Y22 540 aaPredicted RBP14.89□□□□□ -0.03
PTPRE-204ENST00000455661 DNAAF5Q86Y56 855 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 ZNF713Q8N859 430 aaPredicted RBP14.89□□□□□ -0.03
PTPRE-204ENST00000455661 ATP8B4Q8TF62 1192 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 KCTD10Q9H3F6 313 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 CCDC134Q9H6E4 229 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 AZI2Q9H6S1 392 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 SLC24A3Q9HC58 644 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 KDM3AQ9Y4C1 1321 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 ROBO3Q96MS0 1386 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 NQO1P15559 274 aaKnown RBP14.89□□□□□ -0.03
PTPRE-204ENST00000455661 NR2F2P24468 414 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 SF3A3Q12874 501 aaKnown RBP eCLIP14.89□□□□□ -0.03
PTPRE-204ENST00000455661 PRPF4BQ13523 1007 aaKnown RBP14.89□□□□□ -0.03
PTPRE-204ENST00000455661 USP17L2Q6R6M4 530 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 FRMD5Q7Z6J6 570 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 ZC3H3Q8IXZ2 948 aaKnown RBP14.89□□□□□ -0.03
PTPRE-204ENST00000455661 SCFD1Q8WVM8 642 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 FGFBP2Q9BYJ0 223 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 ARMCX3Q9UH62 379 aaPredicted RBP14.89□□□□□ -0.03
PTPRE-204ENST00000455661 TRPC6Q9Y210 931 aa14.89□□□□□ -0.03
PTPRE-204ENST00000455661 SMIM23A6NLE4 172 aa14.88□□□□□ -0.03
PTPRE-204ENST00000455661 PLTPP55058 493 aa14.88□□□□□ -0.03
PTPRE-204ENST00000455661 DHX34Q14147 1143 aaKnown RBP14.88□□□□□ -0.03
PTPRE-204ENST00000455661 ECM1Q16610 540 aa14.88□□□□□ -0.03
PTPRE-204ENST00000455661 TAOK1Q7L7X3 1001 aa14.88□□□□□ -0.03
PTPRE-204ENST00000455661 U2AF1L4Q8WU68 220 aaKnown RBP14.88□□□□□ -0.03
PTPRE-204ENST00000455661 ZDHHC18Q9NUE0 388 aa14.88□□□□□ -0.03
PTPRE-204ENST00000455661 CNOT7Q9UIV1 285 aaKnown RBP14.88□□□□□ -0.03
PTPRE-204ENST00000455661 L3MBTL1Q9Y468 752 aa14.88□□□□□ -0.03
PTPRE-204ENST00000455661 PCDHA2Q9Y5H9 948 aa14.88□□□□□ -0.03
PTPRE-204ENST00000455661 KAT6BQ8WYB5 2073 aa14.88□□□□□ -0.03
PTPRE-204ENST00000455661 PHLPP1O60346 1717 aa14.88□□□□□ -0.03
PTPRE-204ENST00000455661 KRT18P05783 430 aaKnown RBP14.88□□□□□ -0.03
PTPRE-204ENST00000455661 CCND1P24385 295 aa14.88□□□□□ -0.03
PTPRE-204ENST00000455661 PON1P27169 355 aa14.88□□□□□ -0.03
PTPRE-204ENST00000455661 PDE6CP51160 858 aa14.88□□□□□ -0.03
PTPRE-204ENST00000455661 ZNF131P52739 623 aa14.88□□□□□ -0.03
PTPRE-204ENST00000455661 KCTD19Q17RG1 926 aaPredicted RBP14.88□□□□□ -0.03
PTPRE-204ENST00000455661 INTS5Q6P9B9 1019 aaKnown RBP14.88□□□□□ -0.03
PTPRE-204ENST00000455661 GBP7Q8N8V2 638 aaPredicted RBP14.88□□□□□ -0.03
PTPRE-204ENST00000455661 ADAM7Q9H2U9 754 aa14.88□□□□□ -0.03
PTPRE-204ENST00000455661 TFCP2L1Q9NZI6 479 aa14.88□□□□□ -0.03
PTPRE-204ENST00000455661 LAMB2P55268 1798 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 XRCC5P13010 732 aaKnown RBP14.87□□□□□ -0.03
PTPRE-204ENST00000455661 RASA1P20936 1047 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 DRG2P55039 364 aaKnown RBP14.87□□□□□ -0.03
PTPRE-204ENST00000455661 SF3B3Q15393 1217 aaKnown RBP14.87□□□□□ -0.03
PTPRE-204ENST00000455661 KIAA1755Q5JYT7 1200 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 SLC44A5Q8NCS7 719 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 AGAP11Q8TF27 550 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 L3MBTL3Q96JM7 780 aaPredicted RBP14.87□□□□□ -0.03
PTPRE-204ENST00000455661 EPB41L4BQ9H329 900 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 ZHX3Q9H4I2 956 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 MTRF1LQ9UGC7 380 aaKnown RBP14.87□□□□□ -0.03
PTPRE-204ENST00000455661 NENFQ9UMX5 172 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 PLA2G4BP0C869 781 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 ALADP13716 330 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 FERP16591 822 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 GBP1P32455 592 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 GCKP35557 465 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 GALCP54803 685 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 IFI35P80217 286 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms