RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 TRPM1Q7Z4N2 1603 aa5.41□□□□□ -1.54
EPHA3-202ENST00000452448 SPATA5Q8NB90 893 aa5.41□□□□□ -1.54
EPHA3-202ENST00000452448 TOR1AIP2Q8NFQ8 470 aa5.41□□□□□ -1.54
EPHA3-202ENST00000452448 GFM2Q969S9 779 aaKnown RBP5.41□□□□□ -1.54
EPHA3-202ENST00000452448 THAP11Q96EK4 314 aa5.41□□□□□ -1.54
EPHA3-202ENST00000452448 CRELD1Q96HD1 420 aa5.41□□□□□ -1.54
EPHA3-202ENST00000452448 USP26Q9BXU7 913 aa5.41□□□□□ -1.54
EPHA3-202ENST00000452448 PRKD2Q9BZL6 878 aa5.41□□□□□ -1.54
EPHA3-202ENST00000452448 CCDC113Q9H0I3 377 aa5.41□□□□□ -1.54
EPHA3-202ENST00000452448 ZBTB3Q9H5J0 574 aa5.41□□□□□ -1.54
EPHA3-202ENST00000452448 EHMT1Q9H9B1 1298 aa5.41□□□□□ -1.54
EPHA3-202ENST00000452448 TBC1D22BQ9NU19 505 aa5.41□□□□□ -1.54
EPHA3-202ENST00000452448 MIS18AQ9NYP9 233 aa5.41□□□□□ -1.54
EPHA3-202ENST00000452448 HMGXB4Q9UGU5 601 aa5.41□□□□□ -1.54
EPHA3-202ENST00000452448 EIF2B4Q9UI10 523 aaKnown RBP5.41□□□□□ -1.54
EPHA3-202ENST00000452448 CORO1CQ9ULV4 474 aaPredicted RBP5.41□□□□□ -1.54
EPHA3-202ENST00000452448 TMX2Q9Y320 296 aa5.41□□□□□ -1.54
EPHA3-202ENST00000452448 MRPL11Q9Y3B7 192 aaKnown RBP5.41□□□□□ -1.54
EPHA3-202ENST00000452448 ATP10BO94823 1461 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 GOLGA8JA6NMD2 632 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 B4DLN1 442 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 GOLGA8TH3BQL2 631 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 GPR182O15218 404 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 KCNQ2O43526 872 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 NCK2O43639 380 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 STRNO43815 780 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 COBLO75128 1261 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 SMNDC1O75940 238 aaKnown RBP eCLIP5.4□□□□□ -1.54
EPHA3-202ENST00000452448 YEATS4O95619 227 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 GOLGA8HP0CJ92 632 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 CCT6AP40227 531 aaKnown RBP5.4□□□□□ -1.54
EPHA3-202ENST00000452448 ACADSBP45954 432 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 KPNA1P52294 538 aaPredicted RBP5.4□□□□□ -1.54
EPHA3-202ENST00000452448 PLIN5Q00G26 463 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 PFKPQ01813 784 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 PLCB3Q01970 1234 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 APBA1Q02410 837 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 PLOD1Q02809 727 aaPredicted RBP5.4□□□□□ -1.54
EPHA3-202ENST00000452448 PABPC1LQ4VXU2 614 aaKnown RBP5.4□□□□□ -1.54
EPHA3-202ENST00000452448 IFFO2Q5TF58 517 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 FAM180BQ6P0A1 224 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 B4GALNT4Q76KP1 1039 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 CAND1Q86VP6 1230 aaKnown RBP5.4□□□□□ -1.54
EPHA3-202ENST00000452448 RTKN2Q8IZC4 609 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 LRRC47Q8N1G4 583 aaKnown RBP5.4□□□□□ -1.54
EPHA3-202ENST00000452448 CCDC112Q8NEF3 446 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 CEP70Q8NHQ1 597 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 INTS12Q96CB8 462 aaKnown RBP5.4□□□□□ -1.54
EPHA3-202ENST00000452448 ZNF653Q96CK0 615 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 FAM20AQ96MK3 541 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 SAMD11Q96NU1 681 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 CATSPER2Q96P56 530 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 PRPF18Q99633 342 aaKnown RBP5.4□□□□□ -1.54
EPHA3-202ENST00000452448 CGREF1Q99674 301 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 C7orf25Q9BPX7 421 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 TUBA1CQ9BQE3 449 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 OCSTAMPQ9BR26 566 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 RHBDL2Q9NX52 303 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 TMEM260Q9NX78 707 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 ATXN10Q9UBB4 475 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 ZNF180Q9UJW8 692 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 CFL2Q9Y281 166 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 CD2APQ9Y5K6 639 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 MROH2AA6NES4 1674 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 CAMSAP1Q5T5Y3 1602 aa5.4□□□□□ -1.54
EPHA3-202ENST00000452448 UNC13BO14795 1591 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 C17orf113A0A1B0GUU1 675 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 PSMD14O00487 310 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 HAT1O14929 419 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 PFDN1O60925 122 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 TMCC2O75069 709 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 TGDSO95455 350 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 CCDC166P0CW27 439 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 CCDC192P0DO97 292 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 SLC5A1P13866 664 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 GNAQP50148 359 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 GPC3P51654 580 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 SLC12A2P55011 1212 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 KLC1Q07866 573 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 ITGB3BPQ13352 177 aaPredicted RBP5.4□□□□□ -1.55
EPHA3-202ENST00000452448 BYSLQ13895 437 aaKnown RBP5.4□□□□□ -1.55
EPHA3-202ENST00000452448 PDE1CQ14123 709 aaPredicted RBP5.4□□□□□ -1.55
EPHA3-202ENST00000452448 OASLQ15646 514 aaKnown RBP5.4□□□□□ -1.55
EPHA3-202ENST00000452448 MORN1Q5T089 497 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 MFSD6Q6ZSS7 791 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 HS2ST1Q7LGA3 356 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 KRT26Q7Z3Y9 468 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 GALNT5Q7Z7M9 940 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 RNF135Q8IUD6 432 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 TAB3Q8N5C8 712 aaPredicted RBP5.4□□□□□ -1.55
EPHA3-202ENST00000452448 ZNF540Q8NDQ6 660 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 EDEM3Q9BZQ6 932 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 ZNF624Q9P2J8 865 aaPredicted RBP5.4□□□□□ -1.55
EPHA3-202ENST00000452448 MALT1Q9UDY8 824 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 DNAI1Q9UI46 699 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 CDV3Q9UKY7 258 aaKnown RBP5.4□□□□□ -1.55
EPHA3-202ENST00000452448 TMCO1Q9UM00 188 aa5.4□□□□□ -1.55
EPHA3-202ENST00000452448 EIF3AQ14152 1382 aaKnown RBP5.39□□□□□ -1.55
EPHA3-202ENST00000452448 ZNF536O15090 1300 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 YKT6O15498 198 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms